RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 CLIP1P30622 1438 aa10.87□□□□□ -0.67
MCF2L2-212ENST00000488149 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
MCF2L2-212ENST00000488149 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-212ENST00000488149 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-212ENST00000488149 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
MCF2L2-212ENST00000488149 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-212ENST00000488149 FBLN2P98095 1184 aa10.83□□□□□ -0.68
MCF2L2-212ENST00000488149 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
MCF2L2-212ENST00000488149 CEP162Q5TB80 1403 aa10.82□□□□□ -0.68
MCF2L2-212ENST00000488149 PTMAP06454 111 aaKnown RBP10.82□□□□□ -0.68
MCF2L2-212ENST00000488149 EEA1Q15075 1411 aa10.81□□□□□ -0.68
MCF2L2-212ENST00000488149 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
MCF2L2-212ENST00000488149 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
MCF2L2-212ENST00000488149 GOLGA3Q08378 1498 aa10.79□□□□□ -0.68
MCF2L2-212ENST00000488149 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
MCF2L2-212ENST00000488149 L1TD1Q5T7N2 865 aaKnown RBP10.77□□□□□ -0.68
MCF2L2-212ENST00000488149 B4GALNT3Q6L9W6 998 aa10.77□□□□□ -0.68
MCF2L2-212ENST00000488149 SCRIBQ14160 1630 aa10.77□□□□□ -0.69
MCF2L2-212ENST00000488149 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
MCF2L2-212ENST00000488149 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
MCF2L2-212ENST00000488149 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
MCF2L2-212ENST00000488149 TSPY4P0CV99 314 aa10.73□□□□□ -0.69
MCF2L2-212ENST00000488149 TSPY10P0CW01 314 aa10.73□□□□□ -0.69
MCF2L2-212ENST00000488149 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
MCF2L2-212ENST00000488149 TNIKQ9UKE5 1360 aa10.72□□□□□ -0.69
MCF2L2-212ENST00000488149 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
MCF2L2-212ENST00000488149 RGS3P49796 1198 aa10.72□□□□□ -0.69
MCF2L2-212ENST00000488149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.7
MCF2L2-212ENST00000488149 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
MCF2L2-212ENST00000488149 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
MCF2L2-212ENST00000488149 FTSJ3Q8IY81 847 aaKnown RBP10.7□□□□□ -0.7
MCF2L2-212ENST00000488149 ZRSR1Q15695 479 aaKnown RBP10.69□□□□□ -0.7
MCF2L2-212ENST00000488149 MSNP26038 577 aaKnown RBP10.69□□□□□ -0.7
MCF2L2-212ENST00000488149 TIMELESSQ9UNS1 1208 aa10.69□□□□□ -0.7
MCF2L2-212ENST00000488149 CDCA8Q53HL2 280 aa10.68□□□□□ -0.7
MCF2L2-212ENST00000488149 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
MCF2L2-212ENST00000488149 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
MCF2L2-212ENST00000488149 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
MCF2L2-212ENST00000488149 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
MCF2L2-212ENST00000488149 CHAF1AQ13111 956 aaPredicted RBP10.66□□□□□ -0.7
MCF2L2-212ENST00000488149 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
MCF2L2-212ENST00000488149 HSCBQ8IWL3 235 aa10.65□□□□□ -0.7
MCF2L2-212ENST00000488149 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
MCF2L2-212ENST00000488149 MS4A1P11836 297 aa10.65□□□□□ -0.71
MCF2L2-212ENST00000488149 SIN3AQ96ST3 1273 aa10.64□□□□□ -0.71
MCF2L2-212ENST00000488149 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
MCF2L2-212ENST00000488149 CHMP4BQ9H444 224 aaKnown RBP10.64□□□□□ -0.71
MCF2L2-212ENST00000488149 CARD11Q9BXL7 1154 aa10.64□□□□□ -0.71
MCF2L2-212ENST00000488149 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
MCF2L2-212ENST00000488149 PLCB2Q00722 1185 aa10.63□□□□□ -0.71
MCF2L2-212ENST00000488149 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
MCF2L2-212ENST00000488149 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
MCF2L2-212ENST00000488149 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
MCF2L2-212ENST00000488149 IPO9Q96P70 1041 aaKnown RBP10.62□□□□□ -0.71
MCF2L2-212ENST00000488149 NRDCO43847 1150 aa10.62□□□□□ -0.71
MCF2L2-212ENST00000488149 PTMSP20962 102 aa10.61□□□□□ -0.71
MCF2L2-212ENST00000488149 FRAT1Q92837 279 aaPredicted RBP10.6□□□□□ -0.71
MCF2L2-212ENST00000488149 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
MCF2L2-212ENST00000488149 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
MCF2L2-212ENST00000488149 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
MCF2L2-212ENST00000488149 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
MCF2L2-212ENST00000488149 GBP4Q96PP9 640 aa10.57□□□□□ -0.72
MCF2L2-212ENST00000488149 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
MCF2L2-212ENST00000488149 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
MCF2L2-212ENST00000488149 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
MCF2L2-212ENST00000488149 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
MCF2L2-212ENST00000488149 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
MCF2L2-212ENST00000488149 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
MCF2L2-212ENST00000488149 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
MCF2L2-212ENST00000488149 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
MCF2L2-212ENST00000488149 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
MCF2L2-212ENST00000488149 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
MCF2L2-212ENST00000488149 GOLGA6L4A6NEF3 574 aa10.53□□□□□ -0.72
MCF2L2-212ENST00000488149 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
MCF2L2-212ENST00000488149 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
MCF2L2-212ENST00000488149 KIF27Q86VH2 1401 aa10.52□□□□□ -0.73
MCF2L2-212ENST00000488149 SETD5Q9C0A6 1442 aa10.52□□□□□ -0.73
MCF2L2-212ENST00000488149 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
MCF2L2-212ENST00000488149 GZF1Q9H116 711 aaPredicted RBP10.51□□□□□ -0.73
MCF2L2-212ENST00000488149 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
MCF2L2-212ENST00000488149 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
MCF2L2-212ENST00000488149 MCCP23508 829 aa10.5□□□□□ -0.73
MCF2L2-212ENST00000488149 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
MCF2L2-212ENST00000488149 HSPA5P11021 654 aaKnown RBP10.5□□□□□ -0.73
MCF2L2-212ENST00000488149 DRC7Q8IY82 874 aa10.5□□□□□ -0.73
MCF2L2-212ENST00000488149 CFDP1Q9UEE9 299 aaPredicted RBP10.49□□□□□ -0.73
MCF2L2-212ENST00000488149 TMF1P82094 1093 aa10.49□□□□□ -0.73
MCF2L2-212ENST00000488149 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
MCF2L2-212ENST00000488149 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
MCF2L2-212ENST00000488149 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
MCF2L2-212ENST00000488149 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
MCF2L2-212ENST00000488149 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
MCF2L2-212ENST00000488149 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-212ENST00000488149 FGD1P98174 961 aa10.47□□□□□ -0.73
MCF2L2-212ENST00000488149 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-212ENST00000488149 KCNJ4P48050 445 aa10.47□□□□□ -0.73
MCF2L2-212ENST00000488149 GSE1Q14687 1217 aa10.46□□□□□ -0.73
MCF2L2-212ENST00000488149 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
MCF2L2-212ENST00000488149 RALBP1Q15311 655 aa10.46□□□□□ -0.74
MCF2L2-212ENST00000488149 TNNT3P45378 269 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms