RNA–Protein interactions for RNA: ENST00000487501.2

PCED1A-206, Transcript of PC-esterase domain containing 1A, humanhuman

TSL 3

Gene PCED1A, Length 712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-206ENST00000487501 NUP160Q12769 1436 aa19.25■□□□□ 0.67
PCED1A-206ENST00000487501 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
PCED1A-206ENST00000487501 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
PCED1A-206ENST00000487501 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
PCED1A-206ENST00000487501 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
PCED1A-206ENST00000487501 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
PCED1A-206ENST00000487501 KIAA0586Q9BVV6 1533 aa19.14■□□□□ 0.65
PCED1A-206ENST00000487501 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
PCED1A-206ENST00000487501 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
PCED1A-206ENST00000487501 KIF21BO75037 1637 aa19.07■□□□□ 0.64
PCED1A-206ENST00000487501 IQGAP2Q13576 1575 aa19.02■□□□□ 0.63
PCED1A-206ENST00000487501 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
PCED1A-206ENST00000487501 GOLGA3Q08378 1498 aa19■□□□□ 0.63
PCED1A-206ENST00000487501 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
PCED1A-206ENST00000487501 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
PCED1A-206ENST00000487501 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
PCED1A-206ENST00000487501 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
PCED1A-206ENST00000487501 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
PCED1A-206ENST00000487501 DISP1Q96F81 1524 aa18.87■□□□□ 0.61
PCED1A-206ENST00000487501 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
PCED1A-206ENST00000487501 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
PCED1A-206ENST00000487501 PTPRGP23470 1445 aa18.83■□□□□ 0.61
PCED1A-206ENST00000487501 KIAA0556O60303 1618 aa18.82■□□□□ 0.6
PCED1A-206ENST00000487501 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
PCED1A-206ENST00000487501 RANGAP1P46060 587 aaPredicted RBP18.81■□□□□ 0.6
PCED1A-206ENST00000487501 ADCY10Q96PN6 1610 aa18.79■□□□□ 0.6
PCED1A-206ENST00000487501 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCED1A-206ENST00000487501 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
PCED1A-206ENST00000487501 EFCAB5A4FU69 1503 aa18.76■□□□□ 0.59
PCED1A-206ENST00000487501 P3H3Q8IVL6 736 aa18.76■□□□□ 0.59
PCED1A-206ENST00000487501 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
PCED1A-206ENST00000487501 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
PCED1A-206ENST00000487501 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
PCED1A-206ENST00000487501 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
PCED1A-206ENST00000487501 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
PCED1A-206ENST00000487501 UACAQ9BZF9 1416 aa18.7■□□□□ 0.58
PCED1A-206ENST00000487501 ARHGAP35Q9NRY4 1499 aa18.69■□□□□ 0.58
PCED1A-206ENST00000487501 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
PCED1A-206ENST00000487501 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
PCED1A-206ENST00000487501 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
PCED1A-206ENST00000487501 CLIP1P30622 1438 aa18.66■□□□□ 0.58
PCED1A-206ENST00000487501 TSPOAP1O95153 1857 aa18.64■□□□□ 0.57
PCED1A-206ENST00000487501 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
PCED1A-206ENST00000487501 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
PCED1A-206ENST00000487501 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
PCED1A-206ENST00000487501 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
PCED1A-206ENST00000487501 ABCA8O94911 1581 aa18.62■□□□□ 0.57
PCED1A-206ENST00000487501 KDM5BQ9UGL1 1544 aa18.57■□□□□ 0.56
PCED1A-206ENST00000487501 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
PCED1A-206ENST00000487501 KDM6BO15054 1643 aa18.54■□□□□ 0.56
PCED1A-206ENST00000487501 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
PCED1A-206ENST00000487501 NUP153P49790 1475 aaKnown RBP18.5■□□□□ 0.55
PCED1A-206ENST00000487501 ATP10BO94823 1461 aa18.49■□□□□ 0.55
PCED1A-206ENST00000487501 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
PCED1A-206ENST00000487501 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
PCED1A-206ENST00000487501 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
PCED1A-206ENST00000487501 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
PCED1A-206ENST00000487501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
PCED1A-206ENST00000487501 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
PCED1A-206ENST00000487501 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
PCED1A-206ENST00000487501 PPRC1Q5VV67 1664 aaKnown RBP18.45■□□□□ 0.54
PCED1A-206ENST00000487501 GLI2P10070 1586 aa18.44■□□□□ 0.54
PCED1A-206ENST00000487501 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
PCED1A-206ENST00000487501 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
PCED1A-206ENST00000487501 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
PCED1A-206ENST00000487501 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
PCED1A-206ENST00000487501 PCF11O94913 1555 aaKnown RBP18.41■□□□□ 0.54
PCED1A-206ENST00000487501 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
PCED1A-206ENST00000487501 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
PCED1A-206ENST00000487501 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
PCED1A-206ENST00000487501 MAP3K4Q9Y6R4 1608 aa18.38■□□□□ 0.53
PCED1A-206ENST00000487501 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
PCED1A-206ENST00000487501 KCNH8Q96L42 1107 aa18.35■□□□□ 0.53
PCED1A-206ENST00000487501 KDM4FA0A1W2PPD8 638 aa18.34■□□□□ 0.53
PCED1A-206ENST00000487501 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.52
PCED1A-206ENST00000487501 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
PCED1A-206ENST00000487501 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
PCED1A-206ENST00000487501 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
PCED1A-206ENST00000487501 APLP2Q06481 763 aa18.25■□□□□ 0.51
PCED1A-206ENST00000487501 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
PCED1A-206ENST00000487501 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
PCED1A-206ENST00000487501 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
PCED1A-206ENST00000487501 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
PCED1A-206ENST00000487501 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
PCED1A-206ENST00000487501 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
PCED1A-206ENST00000487501 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
PCED1A-206ENST00000487501 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
PCED1A-206ENST00000487501 KIF14Q15058 1648 aa18.19■□□□□ 0.5
PCED1A-206ENST00000487501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
PCED1A-206ENST00000487501 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
PCED1A-206ENST00000487501 LRRC9Q6ZRR7 1453 aa18.14■□□□□ 0.5
PCED1A-206ENST00000487501 PLCH2O75038 1416 aa18.13■□□□□ 0.49
PCED1A-206ENST00000487501 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
PCED1A-206ENST00000487501 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
PCED1A-206ENST00000487501 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
PCED1A-206ENST00000487501 EFCAB2Q5VUJ9 269 aa18.09■□□□□ 0.49
PCED1A-206ENST00000487501 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
PCED1A-206ENST00000487501 NEO1Q92859 1461 aa18.08■□□□□ 0.49
PCED1A-206ENST00000487501 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
PCED1A-206ENST00000487501 FANCAO15360 1455 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms