RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
TOP3B-216ENST00000487485 NPM1P06748 294 aaKnown RBP eCLIP18.09■□□□□ 0.49
TOP3B-216ENST00000487485 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
TOP3B-216ENST00000487485 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
TOP3B-216ENST00000487485 KDM4FA0A1W2PPD8 638 aa18.02■□□□□ 0.48
TOP3B-216ENST00000487485 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
TOP3B-216ENST00000487485 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
TOP3B-216ENST00000487485 ADCY10Q96PN6 1610 aa17.98■□□□□ 0.47
TOP3B-216ENST00000487485 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
TOP3B-216ENST00000487485 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
TOP3B-216ENST00000487485 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
TOP3B-216ENST00000487485 IGF1RP08069 1367 aa17.92■□□□□ 0.46
TOP3B-216ENST00000487485 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
TOP3B-216ENST00000487485 KDM6BO15054 1643 aa17.91■□□□□ 0.46
TOP3B-216ENST00000487485 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
TOP3B-216ENST00000487485 PTPRGP23470 1445 aa17.87■□□□□ 0.45
TOP3B-216ENST00000487485 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-216ENST00000487485 CUL7Q14999 1698 aa17.8■□□□□ 0.44
TOP3B-216ENST00000487485 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
TOP3B-216ENST00000487485 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
TOP3B-216ENST00000487485 ASXL2Q76L83 1435 aa17.77■□□□□ 0.44
TOP3B-216ENST00000487485 ABCC2Q92887 1545 aa17.77■□□□□ 0.43
TOP3B-216ENST00000487485 EEA1Q15075 1411 aa17.75■□□□□ 0.43
TOP3B-216ENST00000487485 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-216ENST00000487485 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
TOP3B-216ENST00000487485 PLB1Q6P1J6 1458 aa17.74■□□□□ 0.43
TOP3B-216ENST00000487485 PPRC1Q5VV67 1664 aaKnown RBP17.73■□□□□ 0.43
TOP3B-216ENST00000487485 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
TOP3B-216ENST00000487485 GLI2P10070 1586 aa17.71■□□□□ 0.43
TOP3B-216ENST00000487485 COL17A1Q9UMD9 1497 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-216ENST00000487485 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
TOP3B-216ENST00000487485 UACAQ9BZF9 1416 aa17.7■□□□□ 0.42
TOP3B-216ENST00000487485 UHRF1BP1LA0JNW5 1464 aa17.69■□□□□ 0.42
TOP3B-216ENST00000487485 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
TOP3B-216ENST00000487485 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
TOP3B-216ENST00000487485 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
TOP3B-216ENST00000487485 EPRSP07814 1512 aaKnown RBP17.65■□□□□ 0.42
TOP3B-216ENST00000487485 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
TOP3B-216ENST00000487485 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
TOP3B-216ENST00000487485 MAP3K4Q9Y6R4 1608 aa17.59■□□□□ 0.41
TOP3B-216ENST00000487485 TEX14Q8IWB6 1497 aa17.57■□□□□ 0.4
TOP3B-216ENST00000487485 KIF21BO75037 1637 aa17.57■□□□□ 0.4
TOP3B-216ENST00000487485 ZCCHC11Q5TAX3 1644 aaKnown RBP17.56■□□□□ 0.4
TOP3B-216ENST00000487485 HECW2Q9P2P5 1572 aa17.56■□□□□ 0.4
TOP3B-216ENST00000487485 UGGT2Q9NYU1 1516 aa17.55■□□□□ 0.4
TOP3B-216ENST00000487485 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
TOP3B-216ENST00000487485 KCNH8Q96L42 1107 aa17.52■□□□□ 0.4
TOP3B-216ENST00000487485 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
TOP3B-216ENST00000487485 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
TOP3B-216ENST00000487485 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
TOP3B-216ENST00000487485 CD109Q6YHK3 1445 aa17.48■□□□□ 0.39
TOP3B-216ENST00000487485 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
TOP3B-216ENST00000487485 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
TOP3B-216ENST00000487485 UBTFP17480 764 aaKnown RBP17.44■□□□□ 0.38
TOP3B-216ENST00000487485 ABCA8O94911 1581 aa17.39■□□□□ 0.37
TOP3B-216ENST00000487485 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
TOP3B-216ENST00000487485 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
TOP3B-216ENST00000487485 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
TOP3B-216ENST00000487485 FBXO41Q8TF61 875 aa17.34■□□□□ 0.37
TOP3B-216ENST00000487485 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
TOP3B-216ENST00000487485 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
TOP3B-216ENST00000487485 ARAP3Q8WWN8 1544 aa17.32■□□□□ 0.36
TOP3B-216ENST00000487485 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
TOP3B-216ENST00000487485 ATP10BO94823 1461 aa17.3■□□□□ 0.36
TOP3B-216ENST00000487485 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
TOP3B-216ENST00000487485 PTPRMP28827 1452 aa17.27■□□□□ 0.36
TOP3B-216ENST00000487485 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
TOP3B-216ENST00000487485 ADAMTSL3P82987 1691 aa17.24■□□□□ 0.35
TOP3B-216ENST00000487485 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
TOP3B-216ENST00000487485 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-216ENST00000487485 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
TOP3B-216ENST00000487485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
TOP3B-216ENST00000487485 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
TOP3B-216ENST00000487485 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
TOP3B-216ENST00000487485 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
TOP3B-216ENST00000487485 NEO1Q92859 1461 aa17.18■□□□□ 0.34
TOP3B-216ENST00000487485 CLIP1P30622 1438 aa17.17■□□□□ 0.34
TOP3B-216ENST00000487485 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
TOP3B-216ENST00000487485 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
TOP3B-216ENST00000487485 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
TOP3B-216ENST00000487485 MADDQ8WXG6 1647 aa17.14■□□□□ 0.33
TOP3B-216ENST00000487485 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
TOP3B-216ENST00000487485 PCF11O94913 1555 aaKnown RBP17.13■□□□□ 0.33
TOP3B-216ENST00000487485 HSPA2P54652 639 aa17.12■□□□□ 0.33
TOP3B-216ENST00000487485 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
TOP3B-216ENST00000487485 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
TOP3B-216ENST00000487485 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
TOP3B-216ENST00000487485 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
TOP3B-216ENST00000487485 DENND4BO75064 1496 aaPredicted RBP17.08■□□□□ 0.32
TOP3B-216ENST00000487485 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
TOP3B-216ENST00000487485 AKNAQ7Z591 1439 aa17.07■□□□□ 0.32
TOP3B-216ENST00000487485 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
TOP3B-216ENST00000487485 ARHGEF40Q8TER5 1519 aa17.04■□□□□ 0.32
TOP3B-216ENST00000487485 MLECQ14165 292 aa17.03■□□□□ 0.32
TOP3B-216ENST00000487485 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
TOP3B-216ENST00000487485 FANCAO15360 1455 aa17.02■□□□□ 0.32
TOP3B-216ENST00000487485 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
TOP3B-216ENST00000487485 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-216ENST00000487485 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
TOP3B-216ENST00000487485 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms