RNA–Protein interactions for RNA: ENST00000487299.5

DPPA4-206, Transcript of developmental pluripotency associated 4, humanhuman

TSL 2

Gene DPPA4, Length 731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-206ENST00000487299 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
DPPA4-206ENST00000487299 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
DPPA4-206ENST00000487299 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
DPPA4-206ENST00000487299 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
DPPA4-206ENST00000487299 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
DPPA4-206ENST00000487299 ADAMTS12P58397 1594 aa17.61■□□□□ 0.41
DPPA4-206ENST00000487299 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
DPPA4-206ENST00000487299 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
DPPA4-206ENST00000487299 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
DPPA4-206ENST00000487299 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
DPPA4-206ENST00000487299 NUP160Q12769 1436 aa17.56■□□□□ 0.4
DPPA4-206ENST00000487299 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
DPPA4-206ENST00000487299 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
DPPA4-206ENST00000487299 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
DPPA4-206ENST00000487299 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
DPPA4-206ENST00000487299 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
DPPA4-206ENST00000487299 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
DPPA4-206ENST00000487299 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
DPPA4-206ENST00000487299 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
DPPA4-206ENST00000487299 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
DPPA4-206ENST00000487299 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
DPPA4-206ENST00000487299 IGF1RP08069 1367 aa17.28■□□□□ 0.36
DPPA4-206ENST00000487299 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
DPPA4-206ENST00000487299 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
DPPA4-206ENST00000487299 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
DPPA4-206ENST00000487299 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
DPPA4-206ENST00000487299 CUL7Q14999 1698 aa17.2■□□□□ 0.34
DPPA4-206ENST00000487299 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
DPPA4-206ENST00000487299 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
DPPA4-206ENST00000487299 DIP2BQ9P265 1576 aa17.15■□□□□ 0.34
DPPA4-206ENST00000487299 FAM69CQ0P6D2 419 aa17.13■□□□□ 0.33
DPPA4-206ENST00000487299 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
DPPA4-206ENST00000487299 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
DPPA4-206ENST00000487299 PTPRGP23470 1445 aa17.05■□□□□ 0.32
DPPA4-206ENST00000487299 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
DPPA4-206ENST00000487299 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
DPPA4-206ENST00000487299 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
DPPA4-206ENST00000487299 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
DPPA4-206ENST00000487299 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
DPPA4-206ENST00000487299 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
DPPA4-206ENST00000487299 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
DPPA4-206ENST00000487299 KDM6BO15054 1643 aa16.98■□□□□ 0.31
DPPA4-206ENST00000487299 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
DPPA4-206ENST00000487299 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
DPPA4-206ENST00000487299 PPRC1Q5VV67 1664 aaKnown RBP16.96■□□□□ 0.31
DPPA4-206ENST00000487299 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.3
DPPA4-206ENST00000487299 ASXL2Q76L83 1435 aa16.96■□□□□ 0.3
DPPA4-206ENST00000487299 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
DPPA4-206ENST00000487299 GLI2P10070 1586 aa16.92■□□□□ 0.3
DPPA4-206ENST00000487299 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
DPPA4-206ENST00000487299 KDM4FA0A1W2PPD8 638 aa16.91■□□□□ 0.3
DPPA4-206ENST00000487299 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
DPPA4-206ENST00000487299 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
DPPA4-206ENST00000487299 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
DPPA4-206ENST00000487299 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
DPPA4-206ENST00000487299 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
DPPA4-206ENST00000487299 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
DPPA4-206ENST00000487299 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
DPPA4-206ENST00000487299 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
DPPA4-206ENST00000487299 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
DPPA4-206ENST00000487299 ABCA8O94911 1581 aa16.78■□□□□ 0.28
DPPA4-206ENST00000487299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
DPPA4-206ENST00000487299 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
DPPA4-206ENST00000487299 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
DPPA4-206ENST00000487299 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
DPPA4-206ENST00000487299 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
DPPA4-206ENST00000487299 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
DPPA4-206ENST00000487299 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
DPPA4-206ENST00000487299 CD109Q6YHK3 1445 aa16.66■□□□□ 0.26
DPPA4-206ENST00000487299 KCNH8Q96L42 1107 aa16.64■□□□□ 0.25
DPPA4-206ENST00000487299 ATP10BO94823 1461 aa16.63■□□□□ 0.25
DPPA4-206ENST00000487299 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
DPPA4-206ENST00000487299 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
DPPA4-206ENST00000487299 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
DPPA4-206ENST00000487299 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
DPPA4-206ENST00000487299 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
DPPA4-206ENST00000487299 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
DPPA4-206ENST00000487299 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
DPPA4-206ENST00000487299 KIF21BO75037 1637 aa16.54■□□□□ 0.24
DPPA4-206ENST00000487299 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
DPPA4-206ENST00000487299 HECW2Q9P2P5 1572 aa16.53■□□□□ 0.24
DPPA4-206ENST00000487299 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
DPPA4-206ENST00000487299 FHOD3Q2V2M9 1422 aa16.52■□□□□ 0.23
DPPA4-206ENST00000487299 FRMPD1Q5SYB0 1578 aa16.48■□□□□ 0.23
DPPA4-206ENST00000487299 EEA1Q15075 1411 aa16.48■□□□□ 0.23
DPPA4-206ENST00000487299 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
DPPA4-206ENST00000487299 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
DPPA4-206ENST00000487299 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
DPPA4-206ENST00000487299 NEO1Q92859 1461 aa16.44■□□□□ 0.22
DPPA4-206ENST00000487299 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
DPPA4-206ENST00000487299 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
DPPA4-206ENST00000487299 ADAMTSL3P82987 1691 aa16.41■□□□□ 0.22
DPPA4-206ENST00000487299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
DPPA4-206ENST00000487299 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
DPPA4-206ENST00000487299 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
DPPA4-206ENST00000487299 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
DPPA4-206ENST00000487299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21
DPPA4-206ENST00000487299 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
DPPA4-206ENST00000487299 PTPRMP28827 1452 aa16.36■□□□□ 0.21
DPPA4-206ENST00000487299 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms