RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 CYB5RLQ6IPT4 315 aa36.26■■■■□ 3.4
BUD23-217ENST00000487006 RAPGEF2Q9Y4G8 1499 aa36.22■■■■□ 3.39
BUD23-217ENST00000487006 KIAA0586Q9BVV6 1533 aa36.19■■■■□ 3.38
BUD23-217ENST00000487006 JPH4Q96JJ6 628 aa36.15■■■■□ 3.38
BUD23-217ENST00000487006 PRG4Q92954 1404 aaPredicted RBP36.13■■■■□ 3.37
BUD23-217ENST00000487006 PRXQ9BXM0 1461 aa36.11■■■■□ 3.37
BUD23-217ENST00000487006 EEA1Q15075 1411 aa36.04■■■■□ 3.36
BUD23-217ENST00000487006 IQGAP2Q13576 1575 aa36.03■■■■□ 3.36
BUD23-217ENST00000487006 CSRNP3Q8WYN3 585 aa36.03■■■■□ 3.36
BUD23-217ENST00000487006 FAM9AQ8IZU1 332 aaPredicted RBP36.01■■■■□ 3.36
BUD23-217ENST00000487006 CTTNBP2Q8WZ74 1663 aa35.95■■■■□ 3.35
BUD23-217ENST00000487006 UGGT2Q9NYU1 1516 aa35.82■■■■□ 3.32
BUD23-217ENST00000487006 DISP1Q96F81 1524 aa35.78■■■■□ 3.32
BUD23-217ENST00000487006 CARMIL2Q6F5E8 1435 aa35.77■■■■□ 3.32
BUD23-217ENST00000487006 KIF21BO75037 1637 aa35.76■■■■□ 3.32
BUD23-217ENST00000487006 KIAA0556O60303 1618 aa35.72■■■■□ 3.31
BUD23-217ENST00000487006 TTBK1Q5TCY1 1321 aaPredicted RBP35.69■■■■□ 3.3
BUD23-217ENST00000487006 TNIKQ9UKE5 1360 aa35.68■■■■□ 3.3
BUD23-217ENST00000487006 PTPRGP23470 1445 aa35.66■■■■□ 3.3
BUD23-217ENST00000487006 ADCY10Q96PN6 1610 aa35.64■■■■□ 3.3
BUD23-217ENST00000487006 EHMT2Q96KQ7 1210 aa35.6■■■■□ 3.29
BUD23-217ENST00000487006 GOLGA3Q08378 1498 aa35.57■■■■□ 3.28
BUD23-217ENST00000487006 TRHP20396 242 aaPredicted RBP35.52■■■■□ 3.28
BUD23-217ENST00000487006 SAMD9Q5K651 1589 aa35.47■■■■□ 3.27
BUD23-217ENST00000487006 RANGAP1P46060 587 aaPredicted RBP35.45■■■■□ 3.27
BUD23-217ENST00000487006 UACAQ9BZF9 1416 aa35.43■■■■□ 3.26
BUD23-217ENST00000487006 UBTFP17480 764 aaKnown RBP35.42■■■■□ 3.26
BUD23-217ENST00000487006 P3H3Q8IVL6 736 aa35.42■■■■□ 3.26
BUD23-217ENST00000487006 ABCC2Q92887 1545 aa35.4■■■■□ 3.26
BUD23-217ENST00000487006 UHRF1BP1LA0JNW5 1464 aa35.4■■■■□ 3.26
BUD23-217ENST00000487006 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
BUD23-217ENST00000487006 PLB1Q6P1J6 1458 aa35.35■■■■□ 3.25
BUD23-217ENST00000487006 MAPKBP1O60336 1514 aa35.35■■■■□ 3.25
BUD23-217ENST00000487006 ABCA8O94911 1581 aa35.31■■■■□ 3.24
BUD23-217ENST00000487006 KIF13AQ9H1H9 1805 aa35.27■■■■□ 3.24
BUD23-217ENST00000487006 FHOD3Q2V2M9 1422 aa35.27■■■■□ 3.24
BUD23-217ENST00000487006 EFCAB5A4FU69 1503 aa35.27■■■■□ 3.24
BUD23-217ENST00000487006 KDM5BQ9UGL1 1544 aa35.24■■■■□ 3.23
BUD23-217ENST00000487006 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
BUD23-217ENST00000487006 DIP2BQ9P265 1576 aa35.18■■■■□ 3.22
BUD23-217ENST00000487006 ABCC10Q5T3U5 1492 aa35.18■■■■□ 3.22
BUD23-217ENST00000487006 ASXL2Q76L83 1435 aa35.16■■■■□ 3.22
BUD23-217ENST00000487006 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
BUD23-217ENST00000487006 RAPGEF6Q8TEU7 1601 aa35.13■■■■□ 3.21
BUD23-217ENST00000487006 FAM69CQ0P6D2 419 aa35.1■■■■□ 3.21
BUD23-217ENST00000487006 ARID3CA6NKF2 412 aa35.07■■■■□ 3.2
BUD23-217ENST00000487006 NUP153P49790 1475 aaKnown RBP35■■■■□ 3.19
BUD23-217ENST00000487006 ATP10BO94823 1461 aa34.99■■■■□ 3.19
BUD23-217ENST00000487006 WDR7Q9Y4E6 1490 aa34.97■■■■□ 3.19
BUD23-217ENST00000487006 EPRSP07814 1512 aaKnown RBP34.96■■■■□ 3.19
BUD23-217ENST00000487006 TSPOAP1O95153 1857 aa34.95■■■■□ 3.19
BUD23-217ENST00000487006 GLI2P10070 1586 aa34.93■■■■□ 3.18
BUD23-217ENST00000487006 FMN1Q68DA7 1419 aa34.9■■■■□ 3.18
BUD23-217ENST00000487006 CLIP1P30622 1438 aa34.89■■■■□ 3.18
BUD23-217ENST00000487006 LOC105371045A0A1W2PR82 267 aa34.84■■■■□ 3.17
BUD23-217ENST00000487006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.83■■■■□ 3.17
BUD23-217ENST00000487006 HNRNPUL2Q1KMD3 747 aaKnown RBP34.83■■■■□ 3.17
BUD23-217ENST00000487006 MAP3K4Q9Y6R4 1608 aa34.81■■■■□ 3.16
BUD23-217ENST00000487006 KCNH8Q96L42 1107 aa34.81■■■■□ 3.16
BUD23-217ENST00000487006 PPRC1Q5VV67 1664 aaKnown RBP34.81■■■■□ 3.16
BUD23-217ENST00000487006 HECW1Q76N89 1606 aa34.81■■■■□ 3.16
BUD23-217ENST00000487006 CDK13Q14004 1512 aaKnown RBP34.8■■■■□ 3.16
BUD23-217ENST00000487006 ATP1B4Q9UN42 357 aaPredicted RBP34.76■■■■□ 3.16
BUD23-217ENST00000487006 CEP162Q5TB80 1403 aa34.75■■■■□ 3.15
BUD23-217ENST00000487006 PCF11O94913 1555 aaKnown RBP34.74■■■■□ 3.15
BUD23-217ENST00000487006 LRRIQ1Q96JM4 1722 aa34.72■■■■□ 3.15
BUD23-217ENST00000487006 CFAP43Q8NDM7 1665 aa34.7■■■■□ 3.15
BUD23-217ENST00000487006 CASKIN1Q8WXD9 1431 aa34.66■■■■□ 3.14
BUD23-217ENST00000487006 CD109Q6YHK3 1445 aa34.64■■■■□ 3.14
BUD23-217ENST00000487006 PLEKHD1A6NEE1 506 aa34.63■■■■□ 3.13
BUD23-217ENST00000487006 ABCA9Q8IUA7 1624 aa34.63■■■■□ 3.13
BUD23-217ENST00000487006 KDM6BO15054 1643 aa34.61■■■■□ 3.13
BUD23-217ENST00000487006 FYCO1Q9BQS8 1478 aa34.59■■■■□ 3.13
BUD23-217ENST00000487006 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
BUD23-217ENST00000487006 MAGI3Q5TCQ9 1506 aa34.56■■■■□ 3.12
BUD23-217ENST00000487006 CCDC18Q5T9S5 1454 aa34.52■■■■□ 3.12
BUD23-217ENST00000487006 TTC37Q6PGP7 1564 aa34.49■■■■□ 3.11
BUD23-217ENST00000487006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.49■■■■□ 3.11
BUD23-217ENST00000487006 COL17A1Q9UMD9 1497 aaPredicted RBP34.46■■■■□ 3.11
BUD23-217ENST00000487006 CDK11AQ9UQ88 783 aaPredicted RBP34.45■■■■□ 3.11
BUD23-217ENST00000487006 KIF14Q15058 1648 aa34.44■■■■□ 3.1
BUD23-217ENST00000487006 TROQ12816 1431 aaPredicted RBP34.44■■■■□ 3.1
BUD23-217ENST00000487006 VPS8Q8N3P4 1428 aa34.31■■■■□ 3.08
BUD23-217ENST00000487006 NEO1Q92859 1461 aa34.29■■■■□ 3.08
BUD23-217ENST00000487006 MYO5CQ9NQX4 1742 aa34.29■■■■□ 3.08
BUD23-217ENST00000487006 ARAP3Q8WWN8 1544 aa34.26■■■■□ 3.08
BUD23-217ENST00000487006 FANCAO15360 1455 aa34.26■■■■□ 3.07
BUD23-217ENST00000487006 PLCH2O75038 1416 aa34.23■■■■□ 3.07
BUD23-217ENST00000487006 CFAP74Q9C0B2 1584 aa34.23■■■■□ 3.07
BUD23-217ENST00000487006 PHLDB1Q86UU1 1377 aa34.22■■■■□ 3.07
BUD23-217ENST00000487006 AKNAQ7Z591 1439 aa34.19■■■■□ 3.06
BUD23-217ENST00000487006 MTUS2Q5JR59 1369 aa34.16■■■■□ 3.06
BUD23-217ENST00000487006 CDC42BPBQ9Y5S2 1711 aa34.15■■■■□ 3.06
BUD23-217ENST00000487006 TIAM1Q13009 1591 aa34.15■■■■□ 3.06
BUD23-217ENST00000487006 PREX2Q70Z35 1606 aa34.14■■■■□ 3.06
BUD23-217ENST00000487006 FRMPD1Q5SYB0 1578 aa34.14■■■■□ 3.06
BUD23-217ENST00000487006 ARHGAP5Q13017 1502 aa34.13■■■■□ 3.05
BUD23-217ENST00000487006 EHBP1L1Q8N3D4 1523 aa34.13■■■■□ 3.05
BUD23-217ENST00000487006 CDC42BPAQ5VT25 1732 aa34.13■■■■□ 3.05
BUD23-217ENST00000487006 RAPGEF3O95398 923 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms