RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 EVX2Q03828 476 aa12.28□□□□□ -0.44
FAM228B-204ENST00000486967 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
FAM228B-204ENST00000486967 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
FAM228B-204ENST00000486967 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.46
FAM228B-204ENST00000486967 SOCS7O14512 581 aa12.2□□□□□ -0.46
FAM228B-204ENST00000486967 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
FAM228B-204ENST00000486967 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
FAM228B-204ENST00000486967 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
FAM228B-204ENST00000486967 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
FAM228B-204ENST00000486967 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
FAM228B-204ENST00000486967 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
FAM228B-204ENST00000486967 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
FAM228B-204ENST00000486967 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
FAM228B-204ENST00000486967 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
FAM228B-204ENST00000486967 GABBR2O75899 941 aa12.07□□□□□ -0.48
FAM228B-204ENST00000486967 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
FAM228B-204ENST00000486967 WDR62O43379 1518 aa12.06□□□□□ -0.48
FAM228B-204ENST00000486967 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
FAM228B-204ENST00000486967 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
FAM228B-204ENST00000486967 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
FAM228B-204ENST00000486967 CREBZFQ9NS37 354 aa12□□□□□ -0.49
FAM228B-204ENST00000486967 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
FAM228B-204ENST00000486967 CLCN6P51797 869 aa11.98□□□□□ -0.49
FAM228B-204ENST00000486967 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
FAM228B-204ENST00000486967 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
FAM228B-204ENST00000486967 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
FAM228B-204ENST00000486967 DCAF1Q9Y4B6 1507 aa11.9□□□□□ -0.5
FAM228B-204ENST00000486967 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
FAM228B-204ENST00000486967 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM228B-204ENST00000486967 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
FAM228B-204ENST00000486967 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
FAM228B-204ENST00000486967 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
FAM228B-204ENST00000486967 DISP3Q9P2K9 1392 aa11.83□□□□□ -0.52
FAM228B-204ENST00000486967 PROM2Q8N271 834 aa11.83□□□□□ -0.52
FAM228B-204ENST00000486967 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
FAM228B-204ENST00000486967 LHX8Q68G74 356 aa11.78□□□□□ -0.52
FAM228B-204ENST00000486967 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
FAM228B-204ENST00000486967 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
FAM228B-204ENST00000486967 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
FAM228B-204ENST00000486967 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
FAM228B-204ENST00000486967 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
FAM228B-204ENST00000486967 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
FAM228B-204ENST00000486967 ZCCHC6Q5VYS8 1495 aaKnown RBP11.71□□□□□ -0.53
FAM228B-204ENST00000486967 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
FAM228B-204ENST00000486967 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
FAM228B-204ENST00000486967 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
FAM228B-204ENST00000486967 CHD1O14646 1710 aa11.66□□□□□ -0.54
FAM228B-204ENST00000486967 MIER1Q8N108 512 aa11.66□□□□□ -0.54
FAM228B-204ENST00000486967 SMARCA4P51532 1647 aa11.65□□□□□ -0.54
FAM228B-204ENST00000486967 ZNF608Q9ULD9 1512 aaPredicted RBP11.64□□□□□ -0.55
FAM228B-204ENST00000486967 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
FAM228B-204ENST00000486967 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
FAM228B-204ENST00000486967 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
FAM228B-204ENST00000486967 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
FAM228B-204ENST00000486967 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.56
FAM228B-204ENST00000486967 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
FAM228B-204ENST00000486967 FKBP8Q14318 412 aa11.57□□□□□ -0.56
FAM228B-204ENST00000486967 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
FAM228B-204ENST00000486967 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
FAM228B-204ENST00000486967 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
FAM228B-204ENST00000486967 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
FAM228B-204ENST00000486967 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
FAM228B-204ENST00000486967 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
FAM228B-204ENST00000486967 KDM6BO15054 1643 aa11.52□□□□□ -0.57
FAM228B-204ENST00000486967 EIF4G3O43432 1585 aaKnown RBP11.51□□□□□ -0.57
FAM228B-204ENST00000486967 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
FAM228B-204ENST00000486967 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
FAM228B-204ENST00000486967 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
FAM228B-204ENST00000486967 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
FAM228B-204ENST00000486967 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
FAM228B-204ENST00000486967 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
FAM228B-204ENST00000486967 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
FAM228B-204ENST00000486967 SLC39A7Q92504 469 aa11.44□□□□□ -0.58
FAM228B-204ENST00000486967 C7P10643 843 aa11.43□□□□□ -0.58
FAM228B-204ENST00000486967 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
FAM228B-204ENST00000486967 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
FAM228B-204ENST00000486967 MAP3K13O43283 966 aa11.4□□□□□ -0.58
FAM228B-204ENST00000486967 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
FAM228B-204ENST00000486967 FAM69CQ0P6D2 419 aa11.37□□□□□ -0.59
FAM228B-204ENST00000486967 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
FAM228B-204ENST00000486967 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
FAM228B-204ENST00000486967 ATN1P54259 1190 aaPredicted RBP11.36□□□□□ -0.59
FAM228B-204ENST00000486967 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
FAM228B-204ENST00000486967 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
FAM228B-204ENST00000486967 NUBP1P53384 320 aa11.35□□□□□ -0.59
FAM228B-204ENST00000486967 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
FAM228B-204ENST00000486967 TIE1P35590 1138 aa11.34□□□□□ -0.59
FAM228B-204ENST00000486967 SGIP1Q9BQI5 828 aa11.34□□□□□ -0.59
FAM228B-204ENST00000486967 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
FAM228B-204ENST00000486967 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
FAM228B-204ENST00000486967 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
FAM228B-204ENST00000486967 CFTRP13569 1480 aa11.32□□□□□ -0.6
FAM228B-204ENST00000486967 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
FAM228B-204ENST00000486967 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
FAM228B-204ENST00000486967 DIP2BQ9P265 1576 aa11.27□□□□□ -0.61
FAM228B-204ENST00000486967 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
FAM228B-204ENST00000486967 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
FAM228B-204ENST00000486967 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
FAM228B-204ENST00000486967 SEC24BO95487 1268 aa11.24□□□□□ -0.61
FAM228B-204ENST00000486967 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms