RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 APLP2Q06481 763 aa18.03■□□□□ 0.48
PRKCB-207ENST00000486868 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
PRKCB-207ENST00000486868 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
PRKCB-207ENST00000486868 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
PRKCB-207ENST00000486868 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
PRKCB-207ENST00000486868 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
PRKCB-207ENST00000486868 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
PRKCB-207ENST00000486868 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
PRKCB-207ENST00000486868 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
PRKCB-207ENST00000486868 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
PRKCB-207ENST00000486868 FMN1Q68DA7 1419 aa17.92■□□□□ 0.46
PRKCB-207ENST00000486868 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.45
PRKCB-207ENST00000486868 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
PRKCB-207ENST00000486868 IQGAP2Q13576 1575 aa17.88■□□□□ 0.45
PRKCB-207ENST00000486868 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
PRKCB-207ENST00000486868 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-207ENST00000486868 NUP160Q12769 1436 aa17.86■□□□□ 0.45
PRKCB-207ENST00000486868 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
PRKCB-207ENST00000486868 FYCO1Q9BQS8 1478 aa17.86■□□□□ 0.45
PRKCB-207ENST00000486868 HRCP23327 699 aa17.8■□□□□ 0.44
PRKCB-207ENST00000486868 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
PRKCB-207ENST00000486868 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
PRKCB-207ENST00000486868 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-207ENST00000486868 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
PRKCB-207ENST00000486868 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
PRKCB-207ENST00000486868 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
PRKCB-207ENST00000486868 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
PRKCB-207ENST00000486868 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
PRKCB-207ENST00000486868 CFAP43Q8NDM7 1665 aa17.71■□□□□ 0.43
PRKCB-207ENST00000486868 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
PRKCB-207ENST00000486868 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
PRKCB-207ENST00000486868 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
PRKCB-207ENST00000486868 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
PRKCB-207ENST00000486868 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-207ENST00000486868 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-207ENST00000486868 FBLN2P98095 1184 aa17.68■□□□□ 0.42
PRKCB-207ENST00000486868 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
PRKCB-207ENST00000486868 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
PRKCB-207ENST00000486868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRKCB-207ENST00000486868 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-207ENST00000486868 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
PRKCB-207ENST00000486868 EPRSP07814 1512 aaKnown RBP17.58■□□□□ 0.41
PRKCB-207ENST00000486868 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
PRKCB-207ENST00000486868 PHLDB1Q86UU1 1377 aa17.55■□□□□ 0.4
PRKCB-207ENST00000486868 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
PRKCB-207ENST00000486868 RAPGEF6Q8TEU7 1601 aa17.53■□□□□ 0.4
PRKCB-207ENST00000486868 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
PRKCB-207ENST00000486868 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-207ENST00000486868 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-207ENST00000486868 CHD1O14646 1710 aa17.52■□□□□ 0.39
PRKCB-207ENST00000486868 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
PRKCB-207ENST00000486868 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
PRKCB-207ENST00000486868 NCOA2Q15596 1464 aa17.49■□□□□ 0.39
PRKCB-207ENST00000486868 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
PRKCB-207ENST00000486868 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
PRKCB-207ENST00000486868 ABCA8O94911 1581 aa17.48■□□□□ 0.39
PRKCB-207ENST00000486868 PTPRGP23470 1445 aa17.47■□□□□ 0.39
PRKCB-207ENST00000486868 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
PRKCB-207ENST00000486868 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
PRKCB-207ENST00000486868 FGD6Q6ZV73 1430 aa17.47■□□□□ 0.39
PRKCB-207ENST00000486868 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
PRKCB-207ENST00000486868 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
PRKCB-207ENST00000486868 CCER1Q8TC90 406 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-207ENST00000486868 MIA2Q96PC5 1412 aa17.44■□□□□ 0.38
PRKCB-207ENST00000486868 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
PRKCB-207ENST00000486868 TROQ12816 1431 aaPredicted RBP17.42■□□□□ 0.38
PRKCB-207ENST00000486868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
PRKCB-207ENST00000486868 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
PRKCB-207ENST00000486868 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
PRKCB-207ENST00000486868 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
PRKCB-207ENST00000486868 ATP10BO94823 1461 aa17.37■□□□□ 0.37
PRKCB-207ENST00000486868 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
PRKCB-207ENST00000486868 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
PRKCB-207ENST00000486868 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
PRKCB-207ENST00000486868 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
PRKCB-207ENST00000486868 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
PRKCB-207ENST00000486868 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
PRKCB-207ENST00000486868 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
PRKCB-207ENST00000486868 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
PRKCB-207ENST00000486868 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
PRKCB-207ENST00000486868 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
PRKCB-207ENST00000486868 DHX57Q6P158 1386 aaKnown RBP17.27■□□□□ 0.35
PRKCB-207ENST00000486868 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
PRKCB-207ENST00000486868 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
PRKCB-207ENST00000486868 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
PRKCB-207ENST00000486868 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
PRKCB-207ENST00000486868 ITGAEP38570 1179 aa17.25■□□□□ 0.35
PRKCB-207ENST00000486868 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
PRKCB-207ENST00000486868 GPATCH8Q9UKJ3 1502 aaKnown RBP17.24■□□□□ 0.35
PRKCB-207ENST00000486868 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
PRKCB-207ENST00000486868 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
PRKCB-207ENST00000486868 KIF14Q15058 1648 aa17.21■□□□□ 0.35
PRKCB-207ENST00000486868 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
PRKCB-207ENST00000486868 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
PRKCB-207ENST00000486868 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-207ENST00000486868 NAIPQ13075 1403 aa17.17■□□□□ 0.34
PRKCB-207ENST00000486868 ABCC5O15440 1437 aa17.15■□□□□ 0.34
PRKCB-207ENST00000486868 DAPK1P53355 1430 aa17.15■□□□□ 0.34
PRKCB-207ENST00000486868 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
PRKCB-207ENST00000486868 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms