RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 KIF27Q86VH2 1401 aa32.86■■■□□ 2.85
GMDS-205ENST00000486793 NPM1P06748 294 aaKnown RBP eCLIP32.83■■■□□ 2.85
GMDS-205ENST00000486793 RUSC2Q8N2Y8 1516 aa32.82■■■□□ 2.85
GMDS-205ENST00000486793 KIAA0586Q9BVV6 1533 aa32.79■■■□□ 2.84
GMDS-205ENST00000486793 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
GMDS-205ENST00000486793 CARMIL1Q5VZK9 1371 aa32.7■■■□□ 2.82
GMDS-205ENST00000486793 ABCC10Q5T3U5 1492 aa32.66■■■□□ 2.82
GMDS-205ENST00000486793 CUL7Q14999 1698 aa32.62■■■□□ 2.81
GMDS-205ENST00000486793 TTBK1Q5TCY1 1321 aaPredicted RBP32.59■■■□□ 2.81
GMDS-205ENST00000486793 KIF13AQ9H1H9 1805 aa32.59■■■□□ 2.81
GMDS-205ENST00000486793 MAPKBP1O60336 1514 aa32.58■■■□□ 2.81
GMDS-205ENST00000486793 PTPRGP23470 1445 aa32.58■■■□□ 2.81
GMDS-205ENST00000486793 ADCY10Q96PN6 1610 aa32.58■■■□□ 2.81
GMDS-205ENST00000486793 TNIKQ9UKE5 1360 aa32.48■■■□□ 2.79
GMDS-205ENST00000486793 CARMIL2Q6F5E8 1435 aa32.48■■■□□ 2.79
GMDS-205ENST00000486793 DIP2BQ9P265 1576 aa32.46■■■□□ 2.79
GMDS-205ENST00000486793 IQGAP2Q13576 1575 aa32.35■■■□□ 2.77
GMDS-205ENST00000486793 ABCC2Q92887 1545 aa32.34■■■□□ 2.77
GMDS-205ENST00000486793 RAPGEF2Q9Y4G8 1499 aa32.31■■■□□ 2.76
GMDS-205ENST00000486793 DISP1Q96F81 1524 aa32.3■■■□□ 2.76
GMDS-205ENST00000486793 UACAQ9BZF9 1416 aa32.28■■■□□ 2.76
GMDS-205ENST00000486793 ASXL2Q76L83 1435 aa32.27■■■□□ 2.76
GMDS-205ENST00000486793 UHRF1BP1LA0JNW5 1464 aa32.25■■■□□ 2.75
GMDS-205ENST00000486793 PLB1Q6P1J6 1458 aa32.24■■■□□ 2.75
GMDS-205ENST00000486793 KDM6BO15054 1643 aa32.22■■■□□ 2.75
GMDS-205ENST00000486793 UGGT2Q9NYU1 1516 aa32.19■■■□□ 2.74
GMDS-205ENST00000486793 KDM4FA0A1W2PPD8 638 aa32.18■■■□□ 2.74
GMDS-205ENST00000486793 TSPOAP1O95153 1857 aa32.16■■■□□ 2.74
GMDS-205ENST00000486793 KDM5BQ9UGL1 1544 aa32.11■■■□□ 2.73
GMDS-205ENST00000486793 GLI2P10070 1586 aa32.11■■■□□ 2.73
GMDS-205ENST00000486793 EPRSP07814 1512 aaKnown RBP32.05■■■□□ 2.72
GMDS-205ENST00000486793 KIAA0556O60303 1618 aa32.04■■■□□ 2.72
GMDS-205ENST00000486793 COL17A1Q9UMD9 1497 aaPredicted RBP31.97■■■□□ 2.71
GMDS-205ENST00000486793 PRXQ9BXM0 1461 aa31.96■■■□□ 2.71
GMDS-205ENST00000486793 PPRC1Q5VV67 1664 aaKnown RBP31.95■■■□□ 2.71
GMDS-205ENST00000486793 GOLGA3Q08378 1498 aa31.94■■■□□ 2.7
GMDS-205ENST00000486793 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
GMDS-205ENST00000486793 KCNH8Q96L42 1107 aa31.9■■■□□ 2.7
GMDS-205ENST00000486793 WDR7Q9Y4E6 1490 aa31.9■■■□□ 2.7
GMDS-205ENST00000486793 TEX14Q8IWB6 1497 aa31.88■■■□□ 2.69
GMDS-205ENST00000486793 MAP3K4Q9Y6R4 1608 aa31.86■■■□□ 2.69
GMDS-205ENST00000486793 P3H3Q8IVL6 736 aa31.83■■■□□ 2.69
GMDS-205ENST00000486793 ABCA8O94911 1581 aa31.81■■■□□ 2.68
GMDS-205ENST00000486793 CTTNBP2Q8WZ74 1663 aa31.8■■■□□ 2.68
GMDS-205ENST00000486793 CD109Q6YHK3 1445 aa31.79■■■□□ 2.68
GMDS-205ENST00000486793 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
GMDS-205ENST00000486793 CSRNP3Q8WYN3 585 aa31.79■■■□□ 2.68
GMDS-205ENST00000486793 ARID3CA6NKF2 412 aa31.76■■■□□ 2.67
GMDS-205ENST00000486793 ADGRL1O94910 1474 aa31.75■■■□□ 2.67
GMDS-205ENST00000486793 MAGI3Q5TCQ9 1506 aa31.7■■■□□ 2.67
GMDS-205ENST00000486793 ATP10BO94823 1461 aa31.65■■■□□ 2.66
GMDS-205ENST00000486793 RANGAP1P46060 587 aaPredicted RBP31.58■■■□□ 2.65
GMDS-205ENST00000486793 CFAP43Q8NDM7 1665 aa31.57■■■□□ 2.64
GMDS-205ENST00000486793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.55■■■□□ 2.64
GMDS-205ENST00000486793 HNRNPUL2Q1KMD3 747 aaKnown RBP31.55■■■□□ 2.64
GMDS-205ENST00000486793 EEA1Q15075 1411 aa31.48■■■□□ 2.63
GMDS-205ENST00000486793 SAMD9Q5K651 1589 aa31.47■■■□□ 2.63
GMDS-205ENST00000486793 ARAP3Q8WWN8 1544 aa31.46■■■□□ 2.63
GMDS-205ENST00000486793 PHLDB1Q86UU1 1377 aa31.43■■■□□ 2.62
GMDS-205ENST00000486793 RAPGEF3O95398 923 aa31.42■■■□□ 2.62
GMDS-205ENST00000486793 FHOD3Q2V2M9 1422 aa31.41■■■□□ 2.62
GMDS-205ENST00000486793 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
GMDS-205ENST00000486793 NUP153P49790 1475 aaKnown RBP31.38■■■□□ 2.61
GMDS-205ENST00000486793 ABCA9Q8IUA7 1624 aa31.36■■■□□ 2.61
GMDS-205ENST00000486793 PLEKHD1A6NEE1 506 aa31.36■■■□□ 2.61
GMDS-205ENST00000486793 ILDR1Q86SU0 546 aaPredicted RBP31.35■■■□□ 2.61
GMDS-205ENST00000486793 NEO1Q92859 1461 aa31.31■■■□□ 2.6
GMDS-205ENST00000486793 HECW2Q9P2P5 1572 aa31.3■■■□□ 2.6
GMDS-205ENST00000486793 KIF21BO75037 1637 aa31.25■■■□□ 2.59
GMDS-205ENST00000486793 EHMT2Q96KQ7 1210 aa31.23■■■□□ 2.59
GMDS-205ENST00000486793 ARID4BQ4LE39 1312 aaPredicted RBP31.19■■■□□ 2.58
GMDS-205ENST00000486793 UBTFP17480 764 aaKnown RBP31.18■■■□□ 2.58
GMDS-205ENST00000486793 EFCAB5A4FU69 1503 aa31.15■■■□□ 2.58
GMDS-205ENST00000486793 AKNAQ7Z591 1439 aa31.15■■■□□ 2.58
GMDS-205ENST00000486793 DENND4BO75064 1496 aaPredicted RBP31.12■■■□□ 2.57
GMDS-205ENST00000486793 PTPRMP28827 1452 aa31.11■■■□□ 2.57
GMDS-205ENST00000486793 ATP1B4Q9UN42 357 aaPredicted RBP31.11■■■□□ 2.57
GMDS-205ENST00000486793 FRMPD1Q5SYB0 1578 aa31.1■■■□□ 2.57
GMDS-205ENST00000486793 FANCAO15360 1455 aa31.09■■■□□ 2.57
GMDS-205ENST00000486793 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
GMDS-205ENST00000486793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.08■■■□□ 2.57
GMDS-205ENST00000486793 ADAMTSL3P82987 1691 aa31.05■■■□□ 2.56
GMDS-205ENST00000486793 CDK13Q14004 1512 aaKnown RBP31.04■■■□□ 2.56
GMDS-205ENST00000486793 TTC37Q6PGP7 1564 aa30.98■■■□□ 2.55
GMDS-205ENST00000486793 PLCH2O75038 1416 aa30.98■■■□□ 2.55
GMDS-205ENST00000486793 FMN1Q68DA7 1419 aa30.98■■■□□ 2.55
GMDS-205ENST00000486793 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
GMDS-205ENST00000486793 ARHGAP35Q9NRY4 1499 aa30.95■■■□□ 2.55
GMDS-205ENST00000486793 BCORL1Q5H9F3 1711 aa30.94■■■□□ 2.54
GMDS-205ENST00000486793 SCAPERQ9BY12 1400 aa30.94■■■□□ 2.54
GMDS-205ENST00000486793 ARHGEF40Q8TER5 1519 aa30.93■■■□□ 2.54
GMDS-205ENST00000486793 YEATS2Q9ULM3 1422 aa30.93■■■□□ 2.54
GMDS-205ENST00000486793 EFCAB2Q5VUJ9 269 aa30.93■■■□□ 2.54
GMDS-205ENST00000486793 CFAP74Q9C0B2 1584 aa30.92■■■□□ 2.54
GMDS-205ENST00000486793 RICTORQ6R327 1708 aa30.91■■■□□ 2.54
GMDS-205ENST00000486793 MADDQ8WXG6 1647 aa30.91■■■□□ 2.54
GMDS-205ENST00000486793 MLECQ14165 292 aa30.88■■■□□ 2.53
GMDS-205ENST00000486793 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
GMDS-205ENST00000486793 POGZQ7Z3K3 1410 aa30.88■■■□□ 2.53
GMDS-205ENST00000486793 MAGI2Q86UL8 1455 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms