RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
PKP4-213ENST00000486254 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
PKP4-213ENST00000486254 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■■■■■ 32.3
PKP4-213ENST00000486254 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
PKP4-213ENST00000486254 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
PKP4-213ENST00000486254 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
PKP4-213ENST00000486254 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
PKP4-213ENST00000486254 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
PKP4-213ENST00000486254 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
PKP4-213ENST00000486254 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
PKP4-213ENST00000486254 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
PKP4-213ENST00000486254 CASKIN1Q8WXD9 1431 aa18.27■□□□□ 0.51
PKP4-213ENST00000486254 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
PKP4-213ENST00000486254 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
PKP4-213ENST00000486254 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
PKP4-213ENST00000486254 RRBP1Q9P2E9 1410 aaKnown RBP18.25■□□□□ 0.51
PKP4-213ENST00000486254 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
PKP4-213ENST00000486254 IQGAP2Q13576 1575 aa18.24■□□□□ 0.51
PKP4-213ENST00000486254 FHOD3Q2V2M9 1422 aa18.21■□□□□ 0.51
PKP4-213ENST00000486254 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
PKP4-213ENST00000486254 LRRC9Q6ZRR7 1453 aa18.19■□□□□ 0.5
PKP4-213ENST00000486254 UGGT2Q9NYU1 1516 aa18.19■□□□□ 0.5
PKP4-213ENST00000486254 KIAA0586Q9BVV6 1533 aa18.16■□□□□ 0.5
PKP4-213ENST00000486254 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
PKP4-213ENST00000486254 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
PKP4-213ENST00000486254 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
PKP4-213ENST00000486254 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
PKP4-213ENST00000486254 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
PKP4-213ENST00000486254 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
PKP4-213ENST00000486254 HECW1Q76N89 1606 aa18.07■□□□□ 0.48
PKP4-213ENST00000486254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
PKP4-213ENST00000486254 NUP160Q12769 1436 aa18.06■□□□□ 0.48
PKP4-213ENST00000486254 KIAA0556O60303 1618 aa18.05■□□□□ 0.48
PKP4-213ENST00000486254 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
PKP4-213ENST00000486254 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
PKP4-213ENST00000486254 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
PKP4-213ENST00000486254 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
PKP4-213ENST00000486254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
PKP4-213ENST00000486254 CEP170Q5SW79 1584 aa18.02■□□□□ 0.47
PKP4-213ENST00000486254 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
PKP4-213ENST00000486254 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
PKP4-213ENST00000486254 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
PKP4-213ENST00000486254 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
PKP4-213ENST00000486254 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
PKP4-213ENST00000486254 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
PKP4-213ENST00000486254 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.46
PKP4-213ENST00000486254 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
PKP4-213ENST00000486254 EPRSP07814 1512 aaKnown RBP17.94■□□□□ 0.46
PKP4-213ENST00000486254 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
PKP4-213ENST00000486254 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
PKP4-213ENST00000486254 RAPGEF6Q8TEU7 1601 aa17.9■□□□□ 0.46
PKP4-213ENST00000486254 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
PKP4-213ENST00000486254 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
PKP4-213ENST00000486254 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
PKP4-213ENST00000486254 MAGI3Q5TCQ9 1506 aa17.86■□□□□ 0.45
PKP4-213ENST00000486254 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
PKP4-213ENST00000486254 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
PKP4-213ENST00000486254 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.44
PKP4-213ENST00000486254 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
PKP4-213ENST00000486254 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
PKP4-213ENST00000486254 CHD1O14646 1710 aa17.81■□□□□ 0.44
PKP4-213ENST00000486254 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
PKP4-213ENST00000486254 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
PKP4-213ENST00000486254 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
PKP4-213ENST00000486254 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
PKP4-213ENST00000486254 ABCA8O94911 1581 aa17.78■□□□□ 0.44
PKP4-213ENST00000486254 PTPN23Q9H3S7 1636 aa17.78■□□□□ 0.44
PKP4-213ENST00000486254 ADCY10Q96PN6 1610 aa17.77■□□□□ 0.43
PKP4-213ENST00000486254 AKNAQ7Z591 1439 aa17.75■□□□□ 0.43
PKP4-213ENST00000486254 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
PKP4-213ENST00000486254 CDK11AQ9UQ88 783 aaPredicted RBP17.74■□□□□ 0.43
PKP4-213ENST00000486254 HFM1A2PYH4 1435 aa17.73■□□□□ 0.43
PKP4-213ENST00000486254 FBLN2P98095 1184 aa17.73■□□□□ 0.43
PKP4-213ENST00000486254 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
PKP4-213ENST00000486254 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
PKP4-213ENST00000486254 PLB1Q6P1J6 1458 aa17.7■□□□□ 0.42
PKP4-213ENST00000486254 ITSN2Q9NZM3 1697 aa17.69■□□□□ 0.42
PKP4-213ENST00000486254 PRG4Q92954 1404 aaPredicted RBP17.67■□□□□ 0.42
PKP4-213ENST00000486254 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
PKP4-213ENST00000486254 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
PKP4-213ENST00000486254 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
PKP4-213ENST00000486254 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.42
PKP4-213ENST00000486254 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
PKP4-213ENST00000486254 ITGAEP38570 1179 aa17.62■□□□□ 0.41
PKP4-213ENST00000486254 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
PKP4-213ENST00000486254 PTPRGP23470 1445 aa17.62■□□□□ 0.41
PKP4-213ENST00000486254 NAIPQ13075 1403 aa17.62■□□□□ 0.41
PKP4-213ENST00000486254 KIF14Q15058 1648 aa17.6■□□□□ 0.41
PKP4-213ENST00000486254 ATP10BO94823 1461 aa17.6■□□□□ 0.41
PKP4-213ENST00000486254 ROCK1Q13464 1354 aa17.6■□□□□ 0.41
PKP4-213ENST00000486254 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
PKP4-213ENST00000486254 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
PKP4-213ENST00000486254 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
PKP4-213ENST00000486254 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
PKP4-213ENST00000486254 ABCC2Q92887 1545 aa17.55■□□□□ 0.4
PKP4-213ENST00000486254 DAPK1P53355 1430 aa17.54■□□□□ 0.4
PKP4-213ENST00000486254 UHRF1BP1LA0JNW5 1464 aa17.54■□□□□ 0.4
PKP4-213ENST00000486254 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
PKP4-213ENST00000486254 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.4
PKP4-213ENST00000486254 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms