RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 JPH4Q96JJ6 628 aa33.41■■■□□ 2.94
SNX5-213ENST00000486039 PRG4Q92954 1404 aaPredicted RBP33.4■■■□□ 2.94
SNX5-213ENST00000486039 RUSC2Q8N2Y8 1516 aa33.39■■■□□ 2.94
SNX5-213ENST00000486039 KIAA0586Q9BVV6 1533 aa33.32■■■□□ 2.92
SNX5-213ENST00000486039 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
SNX5-213ENST00000486039 IQGAP2Q13576 1575 aa33.05■■■□□ 2.88
SNX5-213ENST00000486039 NPM1P06748 294 aaKnown RBP eCLIP33.03■■■□□ 2.88
SNX5-213ENST00000486039 PRXQ9BXM0 1461 aa33.01■■■□□ 2.88
SNX5-213ENST00000486039 KIF13AQ9H1H9 1805 aa32.98■■■□□ 2.87
SNX5-213ENST00000486039 ADCY10Q96PN6 1610 aa32.97■■■□□ 2.87
SNX5-213ENST00000486039 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
SNX5-213ENST00000486039 MAPKBP1O60336 1514 aa32.92■■■□□ 2.86
SNX5-213ENST00000486039 CSRNP3Q8WYN3 585 aa32.91■■■□□ 2.86
SNX5-213ENST00000486039 PTPRGP23470 1445 aa32.9■■■□□ 2.86
SNX5-213ENST00000486039 ABCC10Q5T3U5 1492 aa32.9■■■□□ 2.86
SNX5-213ENST00000486039 DISP1Q96F81 1524 aa32.9■■■□□ 2.86
SNX5-213ENST00000486039 UGGT2Q9NYU1 1516 aa32.89■■■□□ 2.86
SNX5-213ENST00000486039 TNIKQ9UKE5 1360 aa32.89■■■□□ 2.86
SNX5-213ENST00000486039 FAM69CQ0P6D2 419 aa32.89■■■□□ 2.86
SNX5-213ENST00000486039 TTBK1Q5TCY1 1321 aaPredicted RBP32.85■■■□□ 2.85
SNX5-213ENST00000486039 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
SNX5-213ENST00000486039 EEA1Q15075 1411 aa32.83■■■□□ 2.85
SNX5-213ENST00000486039 CTTNBP2Q8WZ74 1663 aa32.82■■■□□ 2.84
SNX5-213ENST00000486039 DIP2BQ9P265 1576 aa32.79■■■□□ 2.84
SNX5-213ENST00000486039 KIAA0556O60303 1618 aa32.76■■■□□ 2.83
SNX5-213ENST00000486039 FAM9AQ8IZU1 332 aaPredicted RBP32.75■■■□□ 2.83
SNX5-213ENST00000486039 AEBP2Q6ZN18 517 aaPredicted RBP32.72■■■□□ 2.83
SNX5-213ENST00000486039 ABCC2Q92887 1545 aa32.69■■■□□ 2.82
SNX5-213ENST00000486039 UACAQ9BZF9 1416 aa32.67■■■□□ 2.82
SNX5-213ENST00000486039 UHRF1BP1LA0JNW5 1464 aa32.66■■■□□ 2.82
SNX5-213ENST00000486039 GOLGA3Q08378 1498 aa32.65■■■□□ 2.82
SNX5-213ENST00000486039 ASXL2Q76L83 1435 aa32.58■■■□□ 2.81
SNX5-213ENST00000486039 PLB1Q6P1J6 1458 aa32.56■■■□□ 2.8
SNX5-213ENST00000486039 TSPOAP1O95153 1857 aa32.54■■■□□ 2.8
SNX5-213ENST00000486039 KIF21BO75037 1637 aa32.52■■■□□ 2.8
SNX5-213ENST00000486039 KDM5BQ9UGL1 1544 aa32.51■■■□□ 2.79
SNX5-213ENST00000486039 KDM6BO15054 1643 aa32.49■■■□□ 2.79
SNX5-213ENST00000486039 P3H3Q8IVL6 736 aa32.48■■■□□ 2.79
SNX5-213ENST00000486039 GLI2P10070 1586 aa32.48■■■□□ 2.79
SNX5-213ENST00000486039 ABCA8O94911 1581 aa32.44■■■□□ 2.78
SNX5-213ENST00000486039 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
SNX5-213ENST00000486039 ZCCHC11Q5TAX3 1644 aaKnown RBP32.41■■■□□ 2.78
SNX5-213ENST00000486039 RANGAP1P46060 587 aaPredicted RBP32.39■■■□□ 2.78
SNX5-213ENST00000486039 EPRSP07814 1512 aaKnown RBP32.38■■■□□ 2.77
SNX5-213ENST00000486039 EHMT2Q96KQ7 1210 aa32.36■■■□□ 2.77
SNX5-213ENST00000486039 PPRC1Q5VV67 1664 aaKnown RBP32.36■■■□□ 2.77
SNX5-213ENST00000486039 UBTFP17480 764 aaKnown RBP32.29■■■□□ 2.76
SNX5-213ENST00000486039 MAP3K4Q9Y6R4 1608 aa32.28■■■□□ 2.76
SNX5-213ENST00000486039 FHOD3Q2V2M9 1422 aa32.26■■■□□ 2.76
SNX5-213ENST00000486039 WDR7Q9Y4E6 1490 aa32.26■■■□□ 2.75
SNX5-213ENST00000486039 TEX14Q8IWB6 1497 aa32.21■■■□□ 2.75
SNX5-213ENST00000486039 EFCAB5A4FU69 1503 aa32.21■■■□□ 2.75
SNX5-213ENST00000486039 ARID3CA6NKF2 412 aa32.2■■■□□ 2.75
SNX5-213ENST00000486039 ATP10BO94823 1461 aa32.19■■■□□ 2.74
SNX5-213ENST00000486039 RAPGEF6Q8TEU7 1601 aa32.18■■■□□ 2.74
SNX5-213ENST00000486039 COL17A1Q9UMD9 1497 aaPredicted RBP32.16■■■□□ 2.74
SNX5-213ENST00000486039 KDM4FA0A1W2PPD8 638 aa32.15■■■□□ 2.74
SNX5-213ENST00000486039 KCNH8Q96L42 1107 aa32.13■■■□□ 2.73
SNX5-213ENST00000486039 NUP153P49790 1475 aaKnown RBP32.1■■■□□ 2.73
SNX5-213ENST00000486039 CD109Q6YHK3 1445 aa32.08■■■□□ 2.73
SNX5-213ENST00000486039 CFAP43Q8NDM7 1665 aa32.06■■■□□ 2.72
SNX5-213ENST00000486039 ARHGAP35Q9NRY4 1499 aa32.06■■■□□ 2.72
SNX5-213ENST00000486039 MAGI3Q5TCQ9 1506 aa32.05■■■□□ 2.72
SNX5-213ENST00000486039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.01■■■□□ 2.71
SNX5-213ENST00000486039 HNRNPUL2Q1KMD3 747 aaKnown RBP32.01■■■□□ 2.71
SNX5-213ENST00000486039 FMN1Q68DA7 1419 aa31.92■■■□□ 2.7
SNX5-213ENST00000486039 ADGRL1O94910 1474 aa31.9■■■□□ 2.7
SNX5-213ENST00000486039 PLEKHD1A6NEE1 506 aa31.87■■■□□ 2.69
SNX5-213ENST00000486039 ABCA9Q8IUA7 1624 aa31.86■■■□□ 2.69
SNX5-213ENST00000486039 CDK13Q14004 1512 aaKnown RBP31.84■■■□□ 2.69
SNX5-213ENST00000486039 ATP1B4Q9UN42 357 aaPredicted RBP31.82■■■□□ 2.68
SNX5-213ENST00000486039 ARAP3Q8WWN8 1544 aa31.8■■■□□ 2.68
SNX5-213ENST00000486039 HECW1Q76N89 1606 aa31.79■■■□□ 2.68
SNX5-213ENST00000486039 PHLDB1Q86UU1 1377 aa31.76■■■□□ 2.67
SNX5-213ENST00000486039 CLIP1P30622 1438 aa31.74■■■□□ 2.67
SNX5-213ENST00000486039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.69■■■□□ 2.66
SNX5-213ENST00000486039 NEO1Q92859 1461 aa31.68■■■□□ 2.66
SNX5-213ENST00000486039 CASKIN1Q8WXD9 1431 aa31.66■■■□□ 2.66
SNX5-213ENST00000486039 PCF11O94913 1555 aaKnown RBP31.64■■■□□ 2.66
SNX5-213ENST00000486039 LRRIQ1Q96JM4 1722 aa31.63■■■□□ 2.65
SNX5-213ENST00000486039 CDK11AQ9UQ88 783 aaPredicted RBP31.63■■■□□ 2.65
SNX5-213ENST00000486039 RAPGEF3O95398 923 aa31.62■■■□□ 2.65
SNX5-213ENST00000486039 TTC37Q6PGP7 1564 aa31.62■■■□□ 2.65
SNX5-213ENST00000486039 TROQ12816 1431 aaPredicted RBP31.57■■■□□ 2.64
SNX5-213ENST00000486039 CCDC18Q5T9S5 1454 aa31.54■■■□□ 2.64
SNX5-213ENST00000486039 FYCO1Q9BQS8 1478 aa31.54■■■□□ 2.64
SNX5-213ENST00000486039 LOC105371045A0A1W2PR82 267 aa31.53■■■□□ 2.64
SNX5-213ENST00000486039 FANCAO15360 1455 aa31.52■■■□□ 2.64
SNX5-213ENST00000486039 CEP162Q5TB80 1403 aa31.52■■■□□ 2.64
SNX5-213ENST00000486039 AKNAQ7Z591 1439 aa31.51■■■□□ 2.64
SNX5-213ENST00000486039 KIF14Q15058 1648 aa31.51■■■□□ 2.63
SNX5-213ENST00000486039 FRMPD1Q5SYB0 1578 aa31.51■■■□□ 2.63
SNX5-213ENST00000486039 PLCH2O75038 1416 aa31.5■■■□□ 2.63
SNX5-213ENST00000486039 DENND4BO75064 1496 aaPredicted RBP31.46■■■□□ 2.63
SNX5-213ENST00000486039 CFAP74Q9C0B2 1584 aa31.45■■■□□ 2.63
SNX5-213ENST00000486039 HECW2Q9P2P5 1572 aa31.42■■■□□ 2.62
SNX5-213ENST00000486039 RICTORQ6R327 1708 aa31.39■■■□□ 2.62
SNX5-213ENST00000486039 MYO5CQ9NQX4 1742 aa31.39■■■□□ 2.62
SNX5-213ENST00000486039 EFCAB2Q5VUJ9 269 aa31.37■■■□□ 2.61
SNX5-213ENST00000486039 ADAMTSL3P82987 1691 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms