RNA–Protein interactions for RNA: ENST00000485876.5

NDUFA3-214, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA3, Length 963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-214ENST00000485876 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
NDUFA3-214ENST00000485876 JPH4Q96JJ6 628 aa22.36■■□□□ 1.17
NDUFA3-214ENST00000485876 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
NDUFA3-214ENST00000485876 TSPOAP1O95153 1857 aa22.31■■□□□ 1.16
NDUFA3-214ENST00000485876 ABCA10Q8WWZ4 1543 aa22.3■■□□□ 1.16
NDUFA3-214ENST00000485876 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
NDUFA3-214ENST00000485876 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
NDUFA3-214ENST00000485876 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
NDUFA3-214ENST00000485876 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
NDUFA3-214ENST00000485876 SOCS7O14512 581 aa22.19■■□□□ 1.14
NDUFA3-214ENST00000485876 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
NDUFA3-214ENST00000485876 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
NDUFA3-214ENST00000485876 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.121e-6■■■■■ 58.5
NDUFA3-214ENST00000485876 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
NDUFA3-214ENST00000485876 DISP3Q9P2K9 1392 aa22■■□□□ 1.11
NDUFA3-214ENST00000485876 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
NDUFA3-214ENST00000485876 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
NDUFA3-214ENST00000485876 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
NDUFA3-214ENST00000485876 PPRC1Q5VV67 1664 aaKnown RBP21.96■■□□□ 1.11
NDUFA3-214ENST00000485876 ASXL2Q76L83 1435 aa21.96■■□□□ 1.11
NDUFA3-214ENST00000485876 GLI2P10070 1586 aa21.95■■□□□ 1.11
NDUFA3-214ENST00000485876 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
NDUFA3-214ENST00000485876 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
NDUFA3-214ENST00000485876 PTPRGP23470 1445 aa21.92■■□□□ 1.1
NDUFA3-214ENST00000485876 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
NDUFA3-214ENST00000485876 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
NDUFA3-214ENST00000485876 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
NDUFA3-214ENST00000485876 CERKQ8TCT0 537 aa21.79■■□□□ 1.08
NDUFA3-214ENST00000485876 EPRSP07814 1512 aaKnown RBP21.79■■□□□ 1.08
NDUFA3-214ENST00000485876 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
NDUFA3-214ENST00000485876 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
NDUFA3-214ENST00000485876 PTPRMP28827 1452 aa21.71■■□□□ 1.07
NDUFA3-214ENST00000485876 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
NDUFA3-214ENST00000485876 UHRF1BP1LA0JNW5 1464 aa21.69■■□□□ 1.06
NDUFA3-214ENST00000485876 CUL7Q14999 1698 aa21.67■■□□□ 1.06
NDUFA3-214ENST00000485876 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
NDUFA3-214ENST00000485876 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
NDUFA3-214ENST00000485876 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
NDUFA3-214ENST00000485876 KIF21BO75037 1637 aa21.62■■□□□ 1.05
NDUFA3-214ENST00000485876 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
NDUFA3-214ENST00000485876 HSPA2P54652 639 aa21.59■■□□□ 1.05
NDUFA3-214ENST00000485876 CD109Q6YHK3 1445 aa21.58■■□□□ 1.05
NDUFA3-214ENST00000485876 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
NDUFA3-214ENST00000485876 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
NDUFA3-214ENST00000485876 SPATA31D1Q6ZQQ2 1576 aa21.53■■□□□ 1.04
NDUFA3-214ENST00000485876 IGF1RP08069 1367 aa21.53■■□□□ 1.04
NDUFA3-214ENST00000485876 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
NDUFA3-214ENST00000485876 ARID4BQ4LE39 1312 aaPredicted RBP21.52■■□□□ 1.03
NDUFA3-214ENST00000485876 WDR7Q9Y4E6 1490 aa21.51■■□□□ 1.03
NDUFA3-214ENST00000485876 ZCCHC11Q5TAX3 1644 aaKnown RBP21.48■■□□□ 1.03
NDUFA3-214ENST00000485876 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
NDUFA3-214ENST00000485876 ARAP3Q8WWN8 1544 aa21.41■■□□□ 1.02
NDUFA3-214ENST00000485876 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
NDUFA3-214ENST00000485876 DISP1Q96F81 1524 aa21.39■■□□□ 1.01
NDUFA3-214ENST00000485876 MADDQ8WXG6 1647 aa21.38■■□□□ 1.01
NDUFA3-214ENST00000485876 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
NDUFA3-214ENST00000485876 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
NDUFA3-214ENST00000485876 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
NDUFA3-214ENST00000485876 IQGAP2Q13576 1575 aa21.36■■□□□ 1.01
NDUFA3-214ENST00000485876 BCORL1Q5H9F3 1711 aa21.35■■□□□ 1.01
NDUFA3-214ENST00000485876 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
NDUFA3-214ENST00000485876 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1
NDUFA3-214ENST00000485876 RIMS1Q86UR5 1692 aaKnown RBP21.27■■□□□ 1
NDUFA3-214ENST00000485876 YEATS2Q9ULM3 1422 aa21.22■□□□□ 0.99
NDUFA3-214ENST00000485876 UGGT2Q9NYU1 1516 aa21.2■□□□□ 0.98
NDUFA3-214ENST00000485876 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
NDUFA3-214ENST00000485876 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
NDUFA3-214ENST00000485876 MLECQ14165 292 aa21.14■□□□□ 0.97
NDUFA3-214ENST00000485876 NEO1Q92859 1461 aa21.13■□□□□ 0.97
NDUFA3-214ENST00000485876 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
NDUFA3-214ENST00000485876 FANCAO15360 1455 aa21.07■□□□□ 0.96
NDUFA3-214ENST00000485876 ABCA8O94911 1581 aa21.06■□□□□ 0.96
NDUFA3-214ENST00000485876 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
NDUFA3-214ENST00000485876 AKNAQ7Z591 1439 aa21.05■□□□□ 0.96
NDUFA3-214ENST00000485876 FRMPD1Q5SYB0 1578 aa21.05■□□□□ 0.96
NDUFA3-214ENST00000485876 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
NDUFA3-214ENST00000485876 PTPRTO14522 1441 aa21.04■□□□□ 0.96
NDUFA3-214ENST00000485876 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
NDUFA3-214ENST00000485876 UBAP1LF5GYI3 381 aa21.02■□□□□ 0.96
NDUFA3-214ENST00000485876 CEBPAP49715 358 aaPredicted RBP21.02■□□□□ 0.96
NDUFA3-214ENST00000485876 ABCA9Q8IUA7 1624 aa21.01■□□□□ 0.95
NDUFA3-214ENST00000485876 STRCQ7RTU9 1775 aa21.01■□□□□ 0.95
NDUFA3-214ENST00000485876 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
NDUFA3-214ENST00000485876 GOLGA3Q08378 1498 aa21■□□□□ 0.95
NDUFA3-214ENST00000485876 ATP10BO94823 1461 aa20.98■□□□□ 0.95
NDUFA3-214ENST00000485876 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
NDUFA3-214ENST00000485876 PREX1Q8TCU6 1659 aa20.98■□□□□ 0.95
NDUFA3-214ENST00000485876 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
NDUFA3-214ENST00000485876 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
NDUFA3-214ENST00000485876 TTC37Q6PGP7 1564 aa20.96■□□□□ 0.95
NDUFA3-214ENST00000485876 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
NDUFA3-214ENST00000485876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
NDUFA3-214ENST00000485876 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
NDUFA3-214ENST00000485876 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
NDUFA3-214ENST00000485876 ZFYVE16Q7Z3T8 1539 aa20.88■□□□□ 0.93
NDUFA3-214ENST00000485876 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
NDUFA3-214ENST00000485876 EFCAB5A4FU69 1503 aa20.86■□□□□ 0.93
NDUFA3-214ENST00000485876 RICTORQ6R327 1708 aa20.86■□□□□ 0.93
NDUFA3-214ENST00000485876 MAGI2Q86UL8 1455 aa20.86■□□□□ 0.93
NDUFA3-214ENST00000485876 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms