RNA–Protein interactions for RNA: ENST00000485088.5

CBWD5-225, Transcript of COBW domain containing 5, humanhuman

TSL 2

Gene CBWD5, Length 3,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD5-225ENST00000485088 FBXO3Q9UK99 471 aa9.08□□□□□ -0.96
CBWD5-225ENST00000485088 BICRAQ9NZM4 1560 aa9.07□□□□□ -0.96
CBWD5-225ENST00000485088 SPDYE4A6NLX3 237 aa9.06□□□□□ -0.96
CBWD5-225ENST00000485088 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
CBWD5-225ENST00000485088 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
CBWD5-225ENST00000485088 APLP2Q06481 763 aa9.05□□□□□ -0.96
CBWD5-225ENST00000485088 RGL2O15211 777 aa9.04□□□□□ -0.96
CBWD5-225ENST00000485088 ECM2O94769 699 aaPredicted RBP9.03□□□□□ -0.96
CBWD5-225ENST00000485088 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
CBWD5-225ENST00000485088 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
CBWD5-225ENST00000485088 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
CBWD5-225ENST00000485088 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
CBWD5-225ENST00000485088 TOP2AP11388 1531 aaKnown RBP9□□□□□ -0.97
CBWD5-225ENST00000485088 PEG3Q9GZU2 1588 aa8.99□□□□□ -0.97
CBWD5-225ENST00000485088 ANP32EQ9BTT0 268 aa8.99□□□□□ -0.97
CBWD5-225ENST00000485088 CEP162Q5TB80 1403 aa8.98□□□□□ -0.97
CBWD5-225ENST00000485088 HOXD11P31277 338 aaPredicted RBP8.98□□□□□ -0.97
CBWD5-225ENST00000485088 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
CBWD5-225ENST00000485088 ITGAEP38570 1179 aa8.97□□□□□ -0.97
CBWD5-225ENST00000485088 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.97
CBWD5-225ENST00000485088 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
CBWD5-225ENST00000485088 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
CBWD5-225ENST00000485088 KCNH8Q96L42 1107 aa8.92□□□□□ -0.98
CBWD5-225ENST00000485088 MKRN4PQ13434 485 aaPredicted RBP8.91□□□□□ -0.98
CBWD5-225ENST00000485088 SOGA1O94964 1423 aa8.9□□□□□ -0.98
CBWD5-225ENST00000485088 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.99
CBWD5-225ENST00000485088 NEFLP07196 543 aa8.9□□□□□ -0.99
CBWD5-225ENST00000485088 ABCC8Q09428 1581 aa8.88□□□□□ -0.99
CBWD5-225ENST00000485088 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
CBWD5-225ENST00000485088 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
CBWD5-225ENST00000485088 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
CBWD5-225ENST00000485088 HIRIP3Q9BW71 556 aaPredicted RBP8.85□□□□□ -0.99
CBWD5-225ENST00000485088 DMRT2Q9Y5R5 561 aa8.84□□□□□ -0.99
CBWD5-225ENST00000485088 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
CBWD5-225ENST00000485088 DDX10Q13206 875 aaKnown RBP8.84□□□□□ -0.99
CBWD5-225ENST00000485088 RUSC2Q8N2Y8 1516 aa8.84□□□□□ -0.99
CBWD5-225ENST00000485088 ZNF219Q9P2Y4 722 aaPredicted RBP8.83□□□□□ -1
CBWD5-225ENST00000485088 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
CBWD5-225ENST00000485088 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
CBWD5-225ENST00000485088 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
CBWD5-225ENST00000485088 CLSPNQ9HAW4 1339 aa8.81□□□□□ -1
CBWD5-225ENST00000485088 ATAD2BQ9ULI0 1458 aa8.8□□□□□ -1
CBWD5-225ENST00000485088 ARID3AQ99856 593 aa8.8□□□□□ -1
CBWD5-225ENST00000485088 PROM2Q8N271 834 aa8.79□□□□□ -1
CBWD5-225ENST00000485088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -1
CBWD5-225ENST00000485088 U3KPZ7 1027 aaPredicted RBP8.78□□□□□ -1
CBWD5-225ENST00000485088 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1
CBWD5-225ENST00000485088 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1
CBWD5-225ENST00000485088 CLIP1P30622 1438 aa8.77□□□□□ -1.01
CBWD5-225ENST00000485088 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
CBWD5-225ENST00000485088 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
CBWD5-225ENST00000485088 CIZ1Q9ULV3 898 aaPredicted RBP8.74□□□□□ -1.01
CBWD5-225ENST00000485088 GOLGA3Q08378 1498 aa8.74□□□□□ -1.01
CBWD5-225ENST00000485088 BRPF1P55201 1214 aaPredicted RBP8.73□□□□□ -1.01
CBWD5-225ENST00000485088 HMGXB3Q12766 1538 aa8.72□□□□□ -1.01
CBWD5-225ENST00000485088 MSH5O43196 834 aa8.72□□□□□ -1.01
CBWD5-225ENST00000485088 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
CBWD5-225ENST00000485088 DHX57Q6P158 1386 aaKnown RBP8.72□□□□□ -1.01
CBWD5-225ENST00000485088 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.01
CBWD5-225ENST00000485088 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.01
CBWD5-225ENST00000485088 SIN3AQ96ST3 1273 aa8.7□□□□□ -1.02
CBWD5-225ENST00000485088 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
CBWD5-225ENST00000485088 ANP32CO43423 234 aa8.7□□□□□ -1.02
CBWD5-225ENST00000485088 SAMD1Q6SPF0 538 aaPredicted RBP8.7□□□□□ -1.02
CBWD5-225ENST00000485088 NKX1-1Q15270 411 aaPredicted RBP8.69□□□□□ -1.02
CBWD5-225ENST00000485088 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
CBWD5-225ENST00000485088 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
CBWD5-225ENST00000485088 CDK11AQ9UQ88 783 aaPredicted RBP8.69□□□□□ -1.02
CBWD5-225ENST00000485088 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
CBWD5-225ENST00000485088 VPS8Q8N3P4 1428 aa8.67□□□□□ -1.02
CBWD5-225ENST00000485088 EEA1Q15075 1411 aa8.66□□□□□ -1.02
CBWD5-225ENST00000485088 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
CBWD5-225ENST00000485088 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
CBWD5-225ENST00000485088 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
CBWD5-225ENST00000485088 TOP2BQ02880 1626 aa8.64□□□□□ -1.03
CBWD5-225ENST00000485088 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
CBWD5-225ENST00000485088 PRDM2Q13029 1718 aa8.63□□□□□ -1.03
CBWD5-225ENST00000485088 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
CBWD5-225ENST00000485088 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
CBWD5-225ENST00000485088 KIF21BO75037 1637 aa8.62□□□□□ -1.03
CBWD5-225ENST00000485088 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
CBWD5-225ENST00000485088 RAPGEF2Q9Y4G8 1499 aa8.61□□□□□ -1.03
CBWD5-225ENST00000485088 DEKP35659 375 aaKnown RBP8.61□□□□□ -1.03
CBWD5-225ENST00000485088 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
CBWD5-225ENST00000485088 B4GALNT3Q6L9W6 998 aa8.59□□□□□ -1.03
CBWD5-225ENST00000485088 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
CBWD5-225ENST00000485088 CFTRP13569 1480 aa8.58□□□□□ -1.04
CBWD5-225ENST00000485088 RAB3GAP2Q9H2M9 1393 aa8.57□□□□□ -1.04
CBWD5-225ENST00000485088 FAM9BQ8IZU0 186 aa8.57□□□□□ -1.04
CBWD5-225ENST00000485088 GTPBP6O43824 516 aaPredicted RBP8.56□□□□□ -1.04
CBWD5-225ENST00000485088 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
CBWD5-225ENST00000485088 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
CBWD5-225ENST00000485088 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
CBWD5-225ENST00000485088 CUX1P39880 1505 aa8.54□□□□□ -1.04
CBWD5-225ENST00000485088 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
CBWD5-225ENST00000485088 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
CBWD5-225ENST00000485088 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
CBWD5-225ENST00000485088 POLA2Q14181 598 aa8.53□□□□□ -1.04
CBWD5-225ENST00000485088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
CBWD5-225ENST00000485088 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms