RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 RANGAP1P46060 587 aaPredicted RBP39.77■■■■□ 3.96
TNFRSF25-215ENST00000485036 EFCAB5A4FU69 1503 aa39.69■■■■□ 3.94
TNFRSF25-215ENST00000485036 GRIN2AQ12879 1464 aa39.62■■■■□ 3.93
TNFRSF25-215ENST00000485036 SYNJ2O15056 1496 aa39.61■■■■□ 3.93
TNFRSF25-215ENST00000485036 SAMD9Q5K651 1589 aa39.56■■■■□ 3.92
TNFRSF25-215ENST00000485036 IQGAP2Q13576 1575 aa39.54■■■■□ 3.92
TNFRSF25-215ENST00000485036 TRIM26Q12899 539 aaPredicted RBP39.54■■■■□ 3.92
TNFRSF25-215ENST00000485036 PCGF6Q9BYE7 350 aa39.45■■■■□ 3.91
TNFRSF25-215ENST00000485036 KIAA0586Q9BVV6 1533 aa39.43■■■■□ 3.9
TNFRSF25-215ENST00000485036 CEP170Q5SW79 1584 aa39.39■■■■□ 3.9
TNFRSF25-215ENST00000485036 FHOD3Q2V2M9 1422 aa39.38■■■■□ 3.89
TNFRSF25-215ENST00000485036 PPARGC1BQ86YN6 1023 aaKnown RBP39.38■■■■□ 3.89
TNFRSF25-215ENST00000485036 UGGT2Q9NYU1 1516 aa39.37■■■■□ 3.89
TNFRSF25-215ENST00000485036 CHMP7Q8WUX9 453 aaPredicted RBP39.37■■■■□ 3.89
TNFRSF25-215ENST00000485036 NUP160Q12769 1436 aa39.36■■■■□ 3.89
TNFRSF25-215ENST00000485036 PCF11O94913 1555 aaKnown RBP39.29■■■■□ 3.88
TNFRSF25-215ENST00000485036 APLP2Q06481 763 aa39.28■■■■□ 3.88
TNFRSF25-215ENST00000485036 FMN1Q68DA7 1419 aa39.26■■■■□ 3.87
TNFRSF25-215ENST00000485036 P3H3Q8IVL6 736 aa39.26■■■■□ 3.87
TNFRSF25-215ENST00000485036 MAP3K1Q13233 1512 aa39.23■■■■□ 3.87
TNFRSF25-215ENST00000485036 CHD1O14646 1710 aa39.23■■■■□ 3.87
TNFRSF25-215ENST00000485036 FYCO1Q9BQS8 1478 aa39.22■■■■□ 3.87
TNFRSF25-215ENST00000485036 FBLN2P98095 1184 aa39.19■■■■□ 3.86
TNFRSF25-215ENST00000485036 CASKIN1Q8WXD9 1431 aa39.18■■■■□ 3.86
TNFRSF25-215ENST00000485036 KIAA0556O60303 1618 aa39.16■■■■□ 3.86
TNFRSF25-215ENST00000485036 TIAM1Q13009 1591 aa39.16■■■■□ 3.86
TNFRSF25-215ENST00000485036 CFAP43Q8NDM7 1665 aa39.15■■■■□ 3.86
TNFRSF25-215ENST00000485036 DISP1Q96F81 1524 aa39.14■■■■□ 3.86
TNFRSF25-215ENST00000485036 TTBK1Q5TCY1 1321 aaPredicted RBP39.07■■■■□ 3.84
TNFRSF25-215ENST00000485036 KANK4Q5T7N3 995 aaPredicted RBP39■■■■□ 3.83
TNFRSF25-215ENST00000485036 LRRIQ1Q96JM4 1722 aa38.96■■■■□ 3.83
TNFRSF25-215ENST00000485036 LRRC9Q6ZRR7 1453 aa38.93■■■■□ 3.82
TNFRSF25-215ENST00000485036 JPH4Q96JJ6 628 aa38.91■■■■□ 3.82
TNFRSF25-215ENST00000485036 HECW1Q76N89 1606 aa38.91■■■■□ 3.82
TNFRSF25-215ENST00000485036 CARMIL2Q6F5E8 1435 aa38.89■■■■□ 3.82
TNFRSF25-215ENST00000485036 SHROOM2Q13796 1616 aa38.87■■■■□ 3.81
TNFRSF25-215ENST00000485036 CCDC18Q5T9S5 1454 aa38.81■■■■□ 3.8
TNFRSF25-215ENST00000485036 CLASP1Q7Z460 1538 aa38.8■■■■□ 3.8
TNFRSF25-215ENST00000485036 ATP1B4Q9UN42 357 aaPredicted RBP38.79■■■■□ 3.8
TNFRSF25-215ENST00000485036 RAPGEF6Q8TEU7 1601 aa38.76■■■■□ 3.8
TNFRSF25-215ENST00000485036 EPRSP07814 1512 aaKnown RBP38.71■■■■□ 3.79
TNFRSF25-215ENST00000485036 PRG4Q92954 1404 aaPredicted RBP38.71■■■■□ 3.79
TNFRSF25-215ENST00000485036 RRBP1Q9P2E9 1410 aaKnown RBP38.69■■■■□ 3.78
TNFRSF25-215ENST00000485036 EHBP1L1Q8N3D4 1523 aa38.65■■■■□ 3.78
TNFRSF25-215ENST00000485036 NUP153P49790 1475 aaKnown RBP38.64■■■■□ 3.78
TNFRSF25-215ENST00000485036 CDK13Q14004 1512 aaKnown RBP38.59■■■■□ 3.77
TNFRSF25-215ENST00000485036 ABCA8O94911 1581 aa38.59■■■■□ 3.77
TNFRSF25-215ENST00000485036 MTUS2Q5JR59 1369 aa38.58■■■■□ 3.77
TNFRSF25-215ENST00000485036 PLB1Q6P1J6 1458 aa38.58■■■■□ 3.77
TNFRSF25-215ENST00000485036 MAGI3Q5TCQ9 1506 aa38.57■■■■□ 3.77
TNFRSF25-215ENST00000485036 PHLDB1Q86UU1 1377 aa38.54■■■■□ 3.76
TNFRSF25-215ENST00000485036 SUPT6HQ7KZ85 1726 aaKnown RBP38.54■■■■□ 3.76
TNFRSF25-215ENST00000485036 CCNB3Q8WWL7 1395 aa38.5■■■■□ 3.75
TNFRSF25-215ENST00000485036 ERCC6L2Q5T890 1561 aa38.49■■■■□ 3.75
TNFRSF25-215ENST00000485036 ARHGEF11O15085 1522 aa38.47■■■■□ 3.75
TNFRSF25-215ENST00000485036 PTPRGP23470 1445 aa38.46■■■■□ 3.75
TNFRSF25-215ENST00000485036 NCOA2Q15596 1464 aa38.43■■■■□ 3.74
TNFRSF25-215ENST00000485036 HRCP23327 699 aa38.38■■■■□ 3.73
TNFRSF25-215ENST00000485036 FGD6Q6ZV73 1430 aa38.3■■■■□ 3.72
TNFRSF25-215ENST00000485036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.29■■■■□ 3.72
TNFRSF25-215ENST00000485036 MYOM3Q5VTT5 1437 aa38.29■■■■□ 3.72
TNFRSF25-215ENST00000485036 ARID3CA6NKF2 412 aa38.29■■■■□ 3.72
TNFRSF25-215ENST00000485036 UACAQ9BZF9 1416 aa38.28■■■■□ 3.72
TNFRSF25-215ENST00000485036 HNRNPUL2Q1KMD3 747 aaKnown RBP38.28■■■■□ 3.72
TNFRSF25-215ENST00000485036 CDK11AQ9UQ88 783 aaPredicted RBP38.26■■■■□ 3.72
TNFRSF25-215ENST00000485036 ADCY10Q96PN6 1610 aa38.26■■■■□ 3.72
TNFRSF25-215ENST00000485036 ATP10BO94823 1461 aa38.26■■■■□ 3.71
TNFRSF25-215ENST00000485036 TROQ12816 1431 aaPredicted RBP38.24■■■■□ 3.71
TNFRSF25-215ENST00000485036 ABCC2Q92887 1545 aa38.23■■■■□ 3.71
TNFRSF25-215ENST00000485036 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
TNFRSF25-215ENST00000485036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.15■■■■□ 3.7
TNFRSF25-215ENST00000485036 UHRF1BP1LA0JNW5 1464 aa38.15■■■■□ 3.7
TNFRSF25-215ENST00000485036 PTPN23Q9H3S7 1636 aa38.13■■■■□ 3.69
TNFRSF25-215ENST00000485036 MIA2Q96PC5 1412 aa38.1■■■■□ 3.69
TNFRSF25-215ENST00000485036 TCOF1Q13428 1488 aaKnown RBP38.1■■■■□ 3.69
TNFRSF25-215ENST00000485036 KIF14Q15058 1648 aa38.1■■■■□ 3.69
TNFRSF25-215ENST00000485036 FAM50AQ14320 339 aaKnown RBP38.07■■■■□ 3.69
TNFRSF25-215ENST00000485036 ITSN2Q9NZM3 1697 aa38.03■■■■□ 3.68
TNFRSF25-215ENST00000485036 PLEKHD1A6NEE1 506 aa38.01■■■■□ 3.67
TNFRSF25-215ENST00000485036 KDM5BQ9UGL1 1544 aa37.99■■■■□ 3.67
TNFRSF25-215ENST00000485036 ZCCHC11Q5TAX3 1644 aaKnown RBP37.98■■■■□ 3.67
TNFRSF25-215ENST00000485036 ABCC10Q5T3U5 1492 aa37.96■■■■□ 3.67
TNFRSF25-215ENST00000485036 ZEB1P37275 1124 aaPredicted RBP37.95■■■■□ 3.67
TNFRSF25-215ENST00000485036 ITGAEP38570 1179 aa37.94■■■■□ 3.66
TNFRSF25-215ENST00000485036 GPATCH8Q9UKJ3 1502 aaKnown RBP37.91■■■■□ 3.66
TNFRSF25-215ENST00000485036 CCER1Q8TC90 406 aaPredicted RBP37.91■■■■□ 3.66
TNFRSF25-215ENST00000485036 CDC42BPAQ5VT25 1732 aa37.9■■■■□ 3.66
TNFRSF25-215ENST00000485036 PTPRKQ15262 1439 aa37.83■■■■□ 3.65
TNFRSF25-215ENST00000485036 SETD5Q9C0A6 1442 aa37.79■■■■□ 3.64
TNFRSF25-215ENST00000485036 DNMT1P26358 1616 aaKnown RBP37.78■■■■□ 3.64
TNFRSF25-215ENST00000485036 RAB3GAP2Q9H2M9 1393 aa37.75■■■■□ 3.63
TNFRSF25-215ENST00000485036 PREX2Q70Z35 1606 aa37.75■■■■□ 3.63
TNFRSF25-215ENST00000485036 CAMSAP2Q08AD1 1489 aa37.75■■■■□ 3.63
TNFRSF25-215ENST00000485036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.73■■■■□ 3.63
TNFRSF25-215ENST00000485036 TTC37Q6PGP7 1564 aa37.72■■■■□ 3.63
TNFRSF25-215ENST00000485036 CFDP1Q9UEE9 299 aaPredicted RBP37.71■■■■□ 3.63
TNFRSF25-215ENST00000485036 HFM1A2PYH4 1435 aa37.71■■■■□ 3.63
TNFRSF25-215ENST00000485036 CDC42BPBQ9Y5S2 1711 aa37.69■■■■□ 3.62
TNFRSF25-215ENST00000485036 AKNAQ7Z591 1439 aa37.68■■■■□ 3.62
TNFRSF25-215ENST00000485036 DAPK1P53355 1430 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms