RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 ERCC6L2Q5T890 1561 aa44.71■■■■■ 4.75
SMDT1-203ENST00000484235 RAPGEF2Q9Y4G8 1499 aa44.65■■■■■ 4.74
SMDT1-203ENST00000484235 JPH4Q96JJ6 628 aa44.64■■■■■ 4.74
SMDT1-203ENST00000484235 KIAA0586Q9BVV6 1533 aa44.6■■■■■ 4.73
SMDT1-203ENST00000484235 CSRNP3Q8WYN3 585 aa44.57■■■■■ 4.73
SMDT1-203ENST00000484235 SHROOM2Q13796 1616 aa44.57■■■■■ 4.72
SMDT1-203ENST00000484235 EEA1Q15075 1411 aa44.56■■■■■ 4.72
SMDT1-203ENST00000484235 PRXQ9BXM0 1461 aa44.51■■■■■ 4.72
SMDT1-203ENST00000484235 PRG4Q92954 1404 aaPredicted RBP44.48■■■■■ 4.71
SMDT1-203ENST00000484235 FAM9AQ8IZU1 332 aaPredicted RBP44.39■■■■■ 4.7
SMDT1-203ENST00000484235 IQGAP2Q13576 1575 aa44.29■■■■■ 4.68
SMDT1-203ENST00000484235 CARMIL2Q6F5E8 1435 aa44.15■■■■■ 4.66
SMDT1-203ENST00000484235 UGGT2Q9NYU1 1516 aa44.09■■■■■ 4.65
SMDT1-203ENST00000484235 CTTNBP2Q8WZ74 1663 aa44.06■■■■■ 4.64
SMDT1-203ENST00000484235 DISP1Q96F81 1524 aa44.01■■■■■ 4.64
SMDT1-203ENST00000484235 TNIKQ9UKE5 1360 aa44■■■■■ 4.63
SMDT1-203ENST00000484235 KIF21BO75037 1637 aa43.99■■■■■ 4.63
SMDT1-203ENST00000484235 PTPRGP23470 1445 aa43.99■■■■■ 4.63
SMDT1-203ENST00000484235 KIF13AQ9H1H9 1805 aa43.95■■■■■ 4.63
SMDT1-203ENST00000484235 AEBP2Q6ZN18 517 aaPredicted RBP43.95■■■■■ 4.63
SMDT1-203ENST00000484235 GOLGA3Q08378 1498 aa43.89■■■■■ 4.62
SMDT1-203ENST00000484235 TTBK1Q5TCY1 1321 aaPredicted RBP43.88■■■■■ 4.61
SMDT1-203ENST00000484235 KIAA0556O60303 1618 aa43.84■■■■■ 4.61
SMDT1-203ENST00000484235 ABCC10Q5T3U5 1492 aa43.82■■■■■ 4.6
SMDT1-203ENST00000484235 NPM1P06748 294 aaKnown RBP eCLIP43.8■■■■■ 4.6
SMDT1-203ENST00000484235 MAPKBP1O60336 1514 aa43.79■■■■■ 4.6
SMDT1-203ENST00000484235 UBTFP17480 764 aaKnown RBP43.79■■■■■ 4.6
SMDT1-203ENST00000484235 EHMT2Q96KQ7 1210 aa43.79■■■■■ 4.6
SMDT1-203ENST00000484235 ADCY10Q96PN6 1610 aa43.79■■■■■ 4.6
SMDT1-203ENST00000484235 FAM69CQ0P6D2 419 aa43.78■■■■■ 4.6
SMDT1-203ENST00000484235 UACAQ9BZF9 1416 aa43.66■■■■■ 4.58
SMDT1-203ENST00000484235 DIP2BQ9P265 1576 aa43.64■■■■■ 4.58
SMDT1-203ENST00000484235 RANGAP1P46060 587 aaPredicted RBP43.64■■■■■ 4.58
SMDT1-203ENST00000484235 P3H3Q8IVL6 736 aa43.64■■■■■ 4.58
SMDT1-203ENST00000484235 UHRF1BP1LA0JNW5 1464 aa43.61■■■■■ 4.57
SMDT1-203ENST00000484235 SAMD9Q5K651 1589 aa43.58■■■■■ 4.57
SMDT1-203ENST00000484235 ABCC2Q92887 1545 aa43.53■■■■■ 4.56
SMDT1-203ENST00000484235 PLB1Q6P1J6 1458 aa43.47■■■■■ 4.55
SMDT1-203ENST00000484235 EFCAB5A4FU69 1503 aa43.43■■■■■ 4.54
SMDT1-203ENST00000484235 ABCA8O94911 1581 aa43.39■■■■■ 4.54
SMDT1-203ENST00000484235 KDM5BQ9UGL1 1544 aa43.38■■■■■ 4.54
SMDT1-203ENST00000484235 FHOD3Q2V2M9 1422 aa43.37■■■■■ 4.53
SMDT1-203ENST00000484235 KDM6BO15054 1643 aa43.26■■■■■ 4.52
SMDT1-203ENST00000484235 ASXL2Q76L83 1435 aa43.26■■■■■ 4.52
SMDT1-203ENST00000484235 TSPOAP1O95153 1857 aa43.25■■■■■ 4.51
SMDT1-203ENST00000484235 ARHGAP35Q9NRY4 1499 aa43.25■■■■■ 4.51
SMDT1-203ENST00000484235 ZCCHC11Q5TAX3 1644 aaKnown RBP43.21■■■■■ 4.51
SMDT1-203ENST00000484235 GLI2P10070 1586 aa43.16■■■■■ 4.5
SMDT1-203ENST00000484235 RAPGEF6Q8TEU7 1601 aa43.15■■■■■ 4.5
SMDT1-203ENST00000484235 KDM4FA0A1W2PPD8 638 aa43.14■■■■■ 4.5
SMDT1-203ENST00000484235 ARID3CA6NKF2 412 aa43.11■■■■■ 4.49
SMDT1-203ENST00000484235 ATP10BO94823 1461 aa43.11■■■■■ 4.49
SMDT1-203ENST00000484235 FMN1Q68DA7 1419 aa43.1■■■■■ 4.49
SMDT1-203ENST00000484235 PPRC1Q5VV67 1664 aaKnown RBP43.06■■■■■ 4.48
SMDT1-203ENST00000484235 NUP153P49790 1475 aaKnown RBP43.05■■■■■ 4.48
SMDT1-203ENST00000484235 LOC105371045A0A1W2PR82 267 aa43.04■■■■■ 4.48
SMDT1-203ENST00000484235 CLIP1P30622 1438 aa43.04■■■■■ 4.48
SMDT1-203ENST00000484235 WDR7Q9Y4E6 1490 aa43.03■■■■■ 4.48
SMDT1-203ENST00000484235 EPRSP07814 1512 aaKnown RBP42.99■■■■■ 4.47
SMDT1-203ENST00000484235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.99■■■■■ 4.47
SMDT1-203ENST00000484235 HNRNPUL2Q1KMD3 747 aaKnown RBP42.99■■■■■ 4.47
SMDT1-203ENST00000484235 KCNH8Q96L42 1107 aa42.93■■■■■ 4.46
SMDT1-203ENST00000484235 COL17A1Q9UMD9 1497 aaPredicted RBP42.92■■■■■ 4.46
SMDT1-203ENST00000484235 ATP1B4Q9UN42 357 aaPredicted RBP42.9■■■■■ 4.46
SMDT1-203ENST00000484235 MAP3K4Q9Y6R4 1608 aa42.87■■■■■ 4.45
SMDT1-203ENST00000484235 CEP162Q5TB80 1403 aa42.84■■■■■ 4.45
SMDT1-203ENST00000484235 PLEKHD1A6NEE1 506 aa42.82■■■■■ 4.45
SMDT1-203ENST00000484235 HECW1Q76N89 1606 aa42.78■■■■■ 4.44
SMDT1-203ENST00000484235 CASKIN1Q8WXD9 1431 aa42.76■■■■■ 4.44
SMDT1-203ENST00000484235 TEX14Q8IWB6 1497 aa42.74■■■■■ 4.43
SMDT1-203ENST00000484235 CDK13Q14004 1512 aaKnown RBP42.71■■■■■ 4.43
SMDT1-203ENST00000484235 CDK11AQ9UQ88 783 aaPredicted RBP42.68■■■■■ 4.42
SMDT1-203ENST00000484235 CD109Q6YHK3 1445 aa42.67■■■■■ 4.42
SMDT1-203ENST00000484235 PCF11O94913 1555 aaKnown RBP42.62■■■■■ 4.41
SMDT1-203ENST00000484235 FYCO1Q9BQS8 1478 aa42.62■■■■■ 4.41
SMDT1-203ENST00000484235 ADGRL1O94910 1474 aa42.61■■■■■ 4.41
SMDT1-203ENST00000484235 CFAP43Q8NDM7 1665 aa42.6■■■■■ 4.41
SMDT1-203ENST00000484235 MAGI3Q5TCQ9 1506 aa42.56■■■■■ 4.4
SMDT1-203ENST00000484235 CCDC18Q5T9S5 1454 aa42.55■■■■■ 4.4
SMDT1-203ENST00000484235 ABCA9Q8IUA7 1624 aa42.53■■■■■ 4.4
SMDT1-203ENST00000484235 LRRIQ1Q96JM4 1722 aa42.48■■■■■ 4.39
SMDT1-203ENST00000484235 TROQ12816 1431 aaPredicted RBP42.44■■■■■ 4.38
SMDT1-203ENST00000484235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.4■■■■■ 4.382e-11■□□□□ 11
SMDT1-203ENST00000484235 VPS8Q8N3P4 1428 aa42.33■■■■■ 4.37
SMDT1-203ENST00000484235 PHLDB1Q86UU1 1377 aa42.32■■■■■ 4.37
SMDT1-203ENST00000484235 TTC37Q6PGP7 1564 aa42.28■■■■■ 4.36
SMDT1-203ENST00000484235 NEO1Q92859 1461 aa42.26■■■■■ 4.36
SMDT1-203ENST00000484235 KIF14Q15058 1648 aa42.26■■■■■ 4.36
SMDT1-203ENST00000484235 ARAP3Q8WWN8 1544 aa42.25■■■■■ 4.35
SMDT1-203ENST00000484235 PLCH2O75038 1416 aa42.23■■■■■ 4.35
SMDT1-203ENST00000484235 FANCAO15360 1455 aa42.17■■■■■ 4.34
SMDT1-203ENST00000484235 MTUS2Q5JR59 1369 aa42.16■■■■■ 4.34
SMDT1-203ENST00000484235 EFCAB2Q5VUJ9 269 aa42.12■■■■■ 4.33
SMDT1-203ENST00000484235 AKNAQ7Z591 1439 aa42.12■■■■■ 4.33
SMDT1-203ENST00000484235 CFAP74Q9C0B2 1584 aa42.06■■■■■ 4.32
SMDT1-203ENST00000484235 HECW2Q9P2P5 1572 aa42.06■■■■■ 4.32
SMDT1-203ENST00000484235 MYO5CQ9NQX4 1742 aa42.06■■■■■ 4.32
SMDT1-203ENST00000484235 RAPGEF3O95398 923 aa42.04■■■■■ 4.32
SMDT1-203ENST00000484235 TIAM1Q13009 1591 aa42■■■■■ 4.31
SMDT1-203ENST00000484235 EHBP1L1Q8N3D4 1523 aa42■■■■■ 4.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms