RNA–Protein interactions for RNA: ENST00000483525.2

SAMMSON-201, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 1 (best)

Gene SAMMSON, Length 2,055 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-201ENST00000483525 GRIN2BQ13224 1484 aa17.25■□□□□ 0.35
SAMMSON-201ENST00000483525 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
SAMMSON-201ENST00000483525 HRCP23327 699 aa17.21■□□□□ 0.35
SAMMSON-201ENST00000483525 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
SAMMSON-201ENST00000483525 APLP2Q06481 763 aa17.2■□□□□ 0.34
SAMMSON-201ENST00000483525 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
SAMMSON-201ENST00000483525 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
SAMMSON-201ENST00000483525 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
SAMMSON-201ENST00000483525 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
SAMMSON-201ENST00000483525 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
SAMMSON-201ENST00000483525 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SAMMSON-201ENST00000483525 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
SAMMSON-201ENST00000483525 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
SAMMSON-201ENST00000483525 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
SAMMSON-201ENST00000483525 P3H3Q8IVL6 736 aa17.08■□□□□ 0.33
SAMMSON-201ENST00000483525 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
SAMMSON-201ENST00000483525 IQGAP2Q13576 1575 aa17.06■□□□□ 0.32
SAMMSON-201ENST00000483525 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
SAMMSON-201ENST00000483525 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
SAMMSON-201ENST00000483525 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
SAMMSON-201ENST00000483525 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
SAMMSON-201ENST00000483525 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
SAMMSON-201ENST00000483525 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
SAMMSON-201ENST00000483525 SYNJ2O15056 1496 aa17.02■□□□□ 0.31
SAMMSON-201ENST00000483525 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
SAMMSON-201ENST00000483525 UGGT2Q9NYU1 1516 aa16.99■□□□□ 0.31
SAMMSON-201ENST00000483525 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
SAMMSON-201ENST00000483525 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
SAMMSON-201ENST00000483525 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
SAMMSON-201ENST00000483525 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
SAMMSON-201ENST00000483525 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
SAMMSON-201ENST00000483525 NUP160Q12769 1436 aa16.93■□□□□ 0.3
SAMMSON-201ENST00000483525 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
SAMMSON-201ENST00000483525 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
SAMMSON-201ENST00000483525 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
SAMMSON-201ENST00000483525 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
SAMMSON-201ENST00000483525 KIAA0556O60303 1618 aa16.89■□□□□ 0.29
SAMMSON-201ENST00000483525 FBLN2P98095 1184 aa16.88■□□□□ 0.29
SAMMSON-201ENST00000483525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
SAMMSON-201ENST00000483525 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
SAMMSON-201ENST00000483525 CCNB3Q8WWL7 1395 aa16.85■□□□□ 0.29
SAMMSON-201ENST00000483525 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
SAMMSON-201ENST00000483525 HECW1Q76N89 1606 aa16.83■□□□□ 0.28
SAMMSON-201ENST00000483525 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
SAMMSON-201ENST00000483525 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
SAMMSON-201ENST00000483525 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
SAMMSON-201ENST00000483525 CHD1O14646 1710 aa16.79■□□□□ 0.28
SAMMSON-201ENST00000483525 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
SAMMSON-201ENST00000483525 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
SAMMSON-201ENST00000483525 CARMIL2Q6F5E8 1435 aa16.76■□□□□ 0.27
SAMMSON-201ENST00000483525 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
SAMMSON-201ENST00000483525 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
SAMMSON-201ENST00000483525 RAPGEF6Q8TEU7 1601 aa16.74■□□□□ 0.27
SAMMSON-201ENST00000483525 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
SAMMSON-201ENST00000483525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
SAMMSON-201ENST00000483525 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
SAMMSON-201ENST00000483525 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
SAMMSON-201ENST00000483525 NUP153P49790 1475 aaKnown RBP16.72■□□□□ 0.27
SAMMSON-201ENST00000483525 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
SAMMSON-201ENST00000483525 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
SAMMSON-201ENST00000483525 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
SAMMSON-201ENST00000483525 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
SAMMSON-201ENST00000483525 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
SAMMSON-201ENST00000483525 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
SAMMSON-201ENST00000483525 FAM50AQ14320 339 aaKnown RBP16.65■□□□□ 0.26
SAMMSON-201ENST00000483525 ABCA8O94911 1581 aa16.64■□□□□ 0.25
SAMMSON-201ENST00000483525 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SAMMSON-201ENST00000483525 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
SAMMSON-201ENST00000483525 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
SAMMSON-201ENST00000483525 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
SAMMSON-201ENST00000483525 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.25
SAMMSON-201ENST00000483525 PTPRGP23470 1445 aa16.58■□□□□ 0.24
SAMMSON-201ENST00000483525 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
SAMMSON-201ENST00000483525 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
SAMMSON-201ENST00000483525 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
SAMMSON-201ENST00000483525 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
SAMMSON-201ENST00000483525 MIA2Q96PC5 1412 aa16.56■□□□□ 0.24
SAMMSON-201ENST00000483525 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
SAMMSON-201ENST00000483525 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
SAMMSON-201ENST00000483525 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
SAMMSON-201ENST00000483525 ATP10BO94823 1461 aa16.55■□□□□ 0.24
SAMMSON-201ENST00000483525 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
SAMMSON-201ENST00000483525 PTPRKQ15262 1439 aa16.53■□□□□ 0.24
SAMMSON-201ENST00000483525 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
SAMMSON-201ENST00000483525 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
SAMMSON-201ENST00000483525 KIF14Q15058 1648 aa16.48■□□□□ 0.23
SAMMSON-201ENST00000483525 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
SAMMSON-201ENST00000483525 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
SAMMSON-201ENST00000483525 ITSN2Q9NZM3 1697 aa16.45■□□□□ 0.22
SAMMSON-201ENST00000483525 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
SAMMSON-201ENST00000483525 GPATCH8Q9UKJ3 1502 aaKnown RBP16.44■□□□□ 0.22
SAMMSON-201ENST00000483525 NAIPQ13075 1403 aa16.43■□□□□ 0.22
SAMMSON-201ENST00000483525 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
SAMMSON-201ENST00000483525 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
SAMMSON-201ENST00000483525 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
SAMMSON-201ENST00000483525 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
SAMMSON-201ENST00000483525 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
SAMMSON-201ENST00000483525 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
SAMMSON-201ENST00000483525 CDC42BPAQ5VT25 1732 aa16.4■□□□□ 0.22
SAMMSON-201ENST00000483525 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms