RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
SYN3-212ENST00000483062 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
SYN3-212ENST00000483062 KIF13AQ9H1H9 1805 aa14.47□□□□□ -0.09
SYN3-212ENST00000483062 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
SYN3-212ENST00000483062 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
SYN3-212ENST00000483062 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
SYN3-212ENST00000483062 FAM69CQ0P6D2 419 aa14.45□□□□□ -0.1
SYN3-212ENST00000483062 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
SYN3-212ENST00000483062 PRG4Q92954 1404 aaPredicted RBP14.43□□□□□ -0.1
SYN3-212ENST00000483062 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
SYN3-212ENST00000483062 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
SYN3-212ENST00000483062 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
SYN3-212ENST00000483062 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
SYN3-212ENST00000483062 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
SYN3-212ENST00000483062 ADCY10Q96PN6 1610 aa14.3□□□□□ -0.12
SYN3-212ENST00000483062 KDM6BO15054 1643 aa14.29□□□□□ -0.12
SYN3-212ENST00000483062 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
SYN3-212ENST00000483062 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
SYN3-212ENST00000483062 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
SYN3-212ENST00000483062 KIAA0586Q9BVV6 1533 aa14.21□□□□□ -0.13
SYN3-212ENST00000483062 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
SYN3-212ENST00000483062 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
SYN3-212ENST00000483062 IGF1RP08069 1367 aa14.17□□□□□ -0.14
SYN3-212ENST00000483062 PTPRGP23470 1445 aa14.15□□□□□ -0.14
SYN3-212ENST00000483062 GLI2P10070 1586 aa14.14□□□□□ -0.15
SYN3-212ENST00000483062 ABCC2Q92887 1545 aa14.14□□□□□ -0.15
SYN3-212ENST00000483062 ASXL2Q76L83 1435 aa14.14□□□□□ -0.15
SYN3-212ENST00000483062 TSPOAP1O95153 1857 aa14.13□□□□□ -0.15
SYN3-212ENST00000483062 PLB1Q6P1J6 1458 aa14.12□□□□□ -0.15
SYN3-212ENST00000483062 PPRC1Q5VV67 1664 aaKnown RBP14.12□□□□□ -0.15
SYN3-212ENST00000483062 HECW2Q9P2P5 1572 aa14.1□□□□□ -0.15
SYN3-212ENST00000483062 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
SYN3-212ENST00000483062 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
SYN3-212ENST00000483062 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
SYN3-212ENST00000483062 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
SYN3-212ENST00000483062 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
SYN3-212ENST00000483062 UACAQ9BZF9 1416 aa14.03□□□□□ -0.16
SYN3-212ENST00000483062 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.16
SYN3-212ENST00000483062 KIF27Q86VH2 1401 aa14.02□□□□□ -0.16
SYN3-212ENST00000483062 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
SYN3-212ENST00000483062 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
SYN3-212ENST00000483062 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
SYN3-212ENST00000483062 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
SYN3-212ENST00000483062 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
SYN3-212ENST00000483062 CUL7Q14999 1698 aa13.99□□□□□ -0.17
SYN3-212ENST00000483062 DISP1Q96F81 1524 aa13.99□□□□□ -0.17
SYN3-212ENST00000483062 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
SYN3-212ENST00000483062 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
SYN3-212ENST00000483062 WDR7Q9Y4E6 1490 aa13.91□□□□□ -0.18
SYN3-212ENST00000483062 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
SYN3-212ENST00000483062 ZCCHC11Q5TAX3 1644 aaKnown RBP13.88□□□□□ -0.19
SYN3-212ENST00000483062 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
SYN3-212ENST00000483062 ARAP3Q8WWN8 1544 aa13.82□□□□□ -0.2
SYN3-212ENST00000483062 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
SYN3-212ENST00000483062 PTPRMP28827 1452 aa13.81□□□□□ -0.2
SYN3-212ENST00000483062 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
SYN3-212ENST00000483062 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
SYN3-212ENST00000483062 CFAP43Q8NDM7 1665 aa13.78□□□□□ -0.2
SYN3-212ENST00000483062 KIF21BO75037 1637 aa13.77□□□□□ -0.21
SYN3-212ENST00000483062 ABCA8O94911 1581 aa13.77□□□□□ -0.21
SYN3-212ENST00000483062 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
SYN3-212ENST00000483062 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
SYN3-212ENST00000483062 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
SYN3-212ENST00000483062 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
SYN3-212ENST00000483062 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
SYN3-212ENST00000483062 ATP10BO94823 1461 aa13.69□□□□□ -0.22
SYN3-212ENST00000483062 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
SYN3-212ENST00000483062 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
SYN3-212ENST00000483062 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
SYN3-212ENST00000483062 NEO1Q92859 1461 aa13.66□□□□□ -0.22
SYN3-212ENST00000483062 BCORL1Q5H9F3 1711 aa13.65□□□□□ -0.22
SYN3-212ENST00000483062 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
SYN3-212ENST00000483062 HSPA2P54652 639 aa13.64□□□□□ -0.23
SYN3-212ENST00000483062 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
SYN3-212ENST00000483062 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
SYN3-212ENST00000483062 SOCS7O14512 581 aa13.63□□□□□ -0.23
SYN3-212ENST00000483062 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
SYN3-212ENST00000483062 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
SYN3-212ENST00000483062 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
SYN3-212ENST00000483062 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
SYN3-212ENST00000483062 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
SYN3-212ENST00000483062 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
SYN3-212ENST00000483062 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
SYN3-212ENST00000483062 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
SYN3-212ENST00000483062 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
SYN3-212ENST00000483062 AKNAQ7Z591 1439 aa13.53□□□□□ -0.24
SYN3-212ENST00000483062 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
SYN3-212ENST00000483062 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
SYN3-212ENST00000483062 YEATS2Q9ULM3 1422 aa13.51□□□□□ -0.25
SYN3-212ENST00000483062 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
SYN3-212ENST00000483062 NUP153P49790 1475 aaKnown RBP13.5□□□□□ -0.25
SYN3-212ENST00000483062 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
SYN3-212ENST00000483062 FANCAO15360 1455 aa13.49□□□□□ -0.25
SYN3-212ENST00000483062 RICTORQ6R327 1708 aa13.49□□□□□ -0.25
SYN3-212ENST00000483062 SIGLEC1Q9BZZ2 1709 aa13.49□□□□□ -0.25
SYN3-212ENST00000483062 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
SYN3-212ENST00000483062 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
SYN3-212ENST00000483062 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.26
SYN3-212ENST00000483062 TTC37Q6PGP7 1564 aa13.45□□□□□ -0.26
SYN3-212ENST00000483062 ARHGEF12Q9NZN5 1544 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms