RNA–Protein interactions for RNA: ENST00000482841.6

ATP7B-208, Transcript of ATPase copper transporting beta, humanhuman

TSL 2

Gene ATP7B, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-208ENST00000482841 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
ATP7B-208ENST00000482841 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
ATP7B-208ENST00000482841 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
ATP7B-208ENST00000482841 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.519e-8■■■□□ 17.2
ATP7B-208ENST00000482841 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
ATP7B-208ENST00000482841 FYCO1Q9BQS8 1478 aa24.48■■□□□ 1.51
ATP7B-208ENST00000482841 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
ATP7B-208ENST00000482841 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
ATP7B-208ENST00000482841 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
ATP7B-208ENST00000482841 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
ATP7B-208ENST00000482841 ZNF316A6NFI3 1004 aaPredicted RBP24.45■■□□□ 1.5
ATP7B-208ENST00000482841 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
ATP7B-208ENST00000482841 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
ATP7B-208ENST00000482841 FHOD3Q2V2M9 1422 aa24.42■■□□□ 1.5
ATP7B-208ENST00000482841 SAMD9Q5K651 1589 aa24.41■■□□□ 1.5
ATP7B-208ENST00000482841 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
ATP7B-208ENST00000482841 FMN1Q68DA7 1419 aa24.38■■□□□ 1.49
ATP7B-208ENST00000482841 PHLDB1Q86UU1 1377 aa24.34■■□□□ 1.49
ATP7B-208ENST00000482841 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
ATP7B-208ENST00000482841 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
ATP7B-208ENST00000482841 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
ATP7B-208ENST00000482841 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
ATP7B-208ENST00000482841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
ATP7B-208ENST00000482841 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
ATP7B-208ENST00000482841 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
ATP7B-208ENST00000482841 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
ATP7B-208ENST00000482841 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
ATP7B-208ENST00000482841 SETD5Q9C0A6 1442 aa24.2■■□□□ 1.46
ATP7B-208ENST00000482841 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
ATP7B-208ENST00000482841 WDR62O43379 1518 aa24.18■■□□□ 1.46
ATP7B-208ENST00000482841 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
ATP7B-208ENST00000482841 MAPKBP1O60336 1514 aa24.14■■□□□ 1.46
ATP7B-208ENST00000482841 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
ATP7B-208ENST00000482841 ITGAEP38570 1179 aa24.12■■□□□ 1.45
ATP7B-208ENST00000482841 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
ATP7B-208ENST00000482841 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
ATP7B-208ENST00000482841 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
ATP7B-208ENST00000482841 CCDC18Q5T9S5 1454 aa24.08■■□□□ 1.44
ATP7B-208ENST00000482841 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
ATP7B-208ENST00000482841 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
ATP7B-208ENST00000482841 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
ATP7B-208ENST00000482841 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
ATP7B-208ENST00000482841 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
ATP7B-208ENST00000482841 HECW1Q76N89 1606 aa24.04■■□□□ 1.44
ATP7B-208ENST00000482841 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
ATP7B-208ENST00000482841 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
ATP7B-208ENST00000482841 NCOA2Q15596 1464 aa24.03■■□□□ 1.44
ATP7B-208ENST00000482841 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
ATP7B-208ENST00000482841 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
ATP7B-208ENST00000482841 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
ATP7B-208ENST00000482841 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
ATP7B-208ENST00000482841 MAGI3Q5TCQ9 1506 aa23.95■■□□□ 1.43
ATP7B-208ENST00000482841 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
ATP7B-208ENST00000482841 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
ATP7B-208ENST00000482841 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
ATP7B-208ENST00000482841 MIER1Q8N108 512 aa23.93■■□□□ 1.42
ATP7B-208ENST00000482841 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
ATP7B-208ENST00000482841 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
ATP7B-208ENST00000482841 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
ATP7B-208ENST00000482841 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
ATP7B-208ENST00000482841 PTPRKQ15262 1439 aa23.89■■□□□ 1.42
ATP7B-208ENST00000482841 KIAA0556O60303 1618 aa23.89■■□□□ 1.41
ATP7B-208ENST00000482841 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
ATP7B-208ENST00000482841 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
ATP7B-208ENST00000482841 MAGI1Q96QZ7 1491 aaPredicted RBP23.86■■□□□ 1.41
ATP7B-208ENST00000482841 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
ATP7B-208ENST00000482841 NAIPQ13075 1403 aa23.82■■□□□ 1.4
ATP7B-208ENST00000482841 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
ATP7B-208ENST00000482841 MIA2Q96PC5 1412 aa23.82■■□□□ 1.4
ATP7B-208ENST00000482841 CDK13Q14004 1512 aaKnown RBP23.8■■□□□ 1.4
ATP7B-208ENST00000482841 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
ATP7B-208ENST00000482841 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
ATP7B-208ENST00000482841 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
ATP7B-208ENST00000482841 RAPGEF6Q8TEU7 1601 aa23.75■■□□□ 1.39
ATP7B-208ENST00000482841 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
ATP7B-208ENST00000482841 NUP153P49790 1475 aaKnown RBP23.73■■□□□ 1.39
ATP7B-208ENST00000482841 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
ATP7B-208ENST00000482841 NUP160Q12769 1436 aa23.68■■□□□ 1.38
ATP7B-208ENST00000482841 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
ATP7B-208ENST00000482841 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
ATP7B-208ENST00000482841 YTHDC1Q96MU7 727 aaKnown RBP23.62■■□□□ 1.37
ATP7B-208ENST00000482841 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
ATP7B-208ENST00000482841 DNMT1P26358 1616 aaKnown RBP23.6■■□□□ 1.37
ATP7B-208ENST00000482841 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
ATP7B-208ENST00000482841 CDK11AQ9UQ88 783 aaPredicted RBP23.59■■□□□ 1.37
ATP7B-208ENST00000482841 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.37
ATP7B-208ENST00000482841 TONSLQ96HA7 1378 aa23.57■■□□□ 1.36
ATP7B-208ENST00000482841 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
ATP7B-208ENST00000482841 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
ATP7B-208ENST00000482841 DAPK1P53355 1430 aa23.55■■□□□ 1.36
ATP7B-208ENST00000482841 DENND4BO75064 1496 aaPredicted RBP23.55■■□□□ 1.36
ATP7B-208ENST00000482841 KDM6BO15054 1643 aa23.54■■□□□ 1.36
ATP7B-208ENST00000482841 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
ATP7B-208ENST00000482841 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
ATP7B-208ENST00000482841 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
ATP7B-208ENST00000482841 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
ATP7B-208ENST00000482841 ABCC5O15440 1437 aa23.51■■□□□ 1.35
ATP7B-208ENST00000482841 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
ATP7B-208ENST00000482841 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
ATP7B-208ENST00000482841 CHIC2Q9UKJ5 165 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms