RNA–Protein interactions for RNA: ENST00000482654.1

PLXNB3-207, Transcript of plexin B3, humanhuman

TSL 5

Gene PLXNB3, Length 717 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-207ENST00000482654 CUL7Q14999 1698 aa35.11■■■■□ 3.21
PLXNB3-207ENST00000482654 AEBP2Q6ZN18 517 aaPredicted RBP35.11■■■■□ 3.21
PLXNB3-207ENST00000482654 KIF27Q86VH2 1401 aa35.08■■■■□ 3.21
PLXNB3-207ENST00000482654 ADCY10Q96PN6 1610 aa35.06■■■■□ 3.2
PLXNB3-207ENST00000482654 IGF1RP08069 1367 aa35.06■■■■□ 3.2
PLXNB3-207ENST00000482654 KIAA0586Q9BVV6 1533 aa35.05■■■■□ 3.2
PLXNB3-207ENST00000482654 MAPKBP1O60336 1514 aa35■■■■□ 3.19
PLXNB3-207ENST00000482654 ABCC10Q5T3U5 1492 aa34.97■■■■□ 3.19
PLXNB3-207ENST00000482654 DIP2BQ9P265 1576 aa34.96■■■■□ 3.19
PLXNB3-207ENST00000482654 NPM1P06748 294 aaKnown RBP eCLIP34.89■■■■□ 3.18
PLXNB3-207ENST00000482654 FAM69CQ0P6D2 419 aa34.89■■■■□ 3.18
PLXNB3-207ENST00000482654 CARMIL1Q5VZK9 1371 aa34.84■■■■□ 3.17
PLXNB3-207ENST00000482654 IQGAP2Q13576 1575 aa34.76■■■■□ 3.16
PLXNB3-207ENST00000482654 PTPRGP23470 1445 aa34.74■■■■□ 3.15
PLXNB3-207ENST00000482654 TTBK1Q5TCY1 1321 aaPredicted RBP34.74■■■■□ 3.15
PLXNB3-207ENST00000482654 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
PLXNB3-207ENST00000482654 KDM6BO15054 1643 aa34.7■■■■□ 3.14
PLXNB3-207ENST00000482654 CARMIL2Q6F5E8 1435 aa34.68■■■■□ 3.14
PLXNB3-207ENST00000482654 TNIKQ9UKE5 1360 aa34.66■■■■□ 3.14
PLXNB3-207ENST00000482654 ABCC2Q92887 1545 aa34.64■■■■□ 3.14
PLXNB3-207ENST00000482654 DISP1Q96F81 1524 aa34.6■■■■□ 3.13
PLXNB3-207ENST00000482654 ASXL2Q76L83 1435 aa34.55■■■■□ 3.12
PLXNB3-207ENST00000482654 UHRF1BP1LA0JNW5 1464 aa34.52■■■■□ 3.12
PLXNB3-207ENST00000482654 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
PLXNB3-207ENST00000482654 UGGT2Q9NYU1 1516 aa34.5■■■■□ 3.11
PLXNB3-207ENST00000482654 UACAQ9BZF9 1416 aa34.49■■■■□ 3.11
PLXNB3-207ENST00000482654 PPRC1Q5VV67 1664 aaKnown RBP34.49■■■■□ 3.11
PLXNB3-207ENST00000482654 KIAA0556O60303 1618 aa34.48■■■■□ 3.11
PLXNB3-207ENST00000482654 PLB1Q6P1J6 1458 aa34.47■■■■□ 3.11
PLXNB3-207ENST00000482654 GLI2P10070 1586 aa34.45■■■■□ 3.11
PLXNB3-207ENST00000482654 ZCCHC11Q5TAX3 1644 aaKnown RBP34.39■■■■□ 3.1
PLXNB3-207ENST00000482654 KDM5BQ9UGL1 1544 aa34.39■■■■□ 3.1
PLXNB3-207ENST00000482654 CTTNBP2Q8WZ74 1663 aa34.37■■■■□ 3.09
PLXNB3-207ENST00000482654 KDM4FA0A1W2PPD8 638 aa34.34■■■■□ 3.09
PLXNB3-207ENST00000482654 EPRSP07814 1512 aaKnown RBP34.34■■■■□ 3.09
PLXNB3-207ENST00000482654 MAP3K4Q9Y6R4 1608 aa34.32■■■■□ 3.08
PLXNB3-207ENST00000482654 COL17A1Q9UMD9 1497 aaPredicted RBP34.21■■■■□ 3.07
PLXNB3-207ENST00000482654 WDR7Q9Y4E6 1490 aa34.19■■■■□ 3.06
PLXNB3-207ENST00000482654 TEX14Q8IWB6 1497 aa34.16■■■■□ 3.06
PLXNB3-207ENST00000482654 GOLGA3Q08378 1498 aa34.15■■■■□ 3.06
PLXNB3-207ENST00000482654 PRXQ9BXM0 1461 aa34.14■■■■□ 3.06
PLXNB3-207ENST00000482654 ABCA8O94911 1581 aa34.14■■■■□ 3.06
PLXNB3-207ENST00000482654 ADGRL1O94910 1474 aa34.12■■■■□ 3.05
PLXNB3-207ENST00000482654 CFAP43Q8NDM7 1665 aa34.01■■■■□ 3.04
PLXNB3-207ENST00000482654 MAGI3Q5TCQ9 1506 aa33.94■■■■□ 3.02
PLXNB3-207ENST00000482654 CD109Q6YHK3 1445 aa33.94■■■■□ 3.02
PLXNB3-207ENST00000482654 KCNH8Q96L42 1107 aa33.92■■■■□ 3.02
PLXNB3-207ENST00000482654 ARID3CA6NKF2 412 aa33.87■■■■□ 3.01
PLXNB3-207ENST00000482654 P3H3Q8IVL6 736 aa33.85■■■■□ 3.01
PLXNB3-207ENST00000482654 SAMD9Q5K651 1589 aa33.85■■■■□ 3.01
PLXNB3-207ENST00000482654 ATP10BO94823 1461 aa33.8■■■■□ 3
PLXNB3-207ENST00000482654 KIF21BO75037 1637 aa33.75■■■□□ 2.99
PLXNB3-207ENST00000482654 RAPGEF6Q8TEU7 1601 aa33.75■■■□□ 2.99
PLXNB3-207ENST00000482654 HECW2Q9P2P5 1572 aa33.73■■■□□ 2.99
PLXNB3-207ENST00000482654 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
PLXNB3-207ENST00000482654 ABCA9Q8IUA7 1624 aa33.71■■■□□ 2.99
PLXNB3-207ENST00000482654 ARAP3Q8WWN8 1544 aa33.68■■■□□ 2.98
PLXNB3-207ENST00000482654 FAM9AQ8IZU1 332 aaPredicted RBP33.65■■■□□ 2.98
PLXNB3-207ENST00000482654 NUP153P49790 1475 aaKnown RBP33.62■■■□□ 2.97
PLXNB3-207ENST00000482654 FHOD3Q2V2M9 1422 aa33.61■■■□□ 2.97
PLXNB3-207ENST00000482654 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
PLXNB3-207ENST00000482654 EEA1Q15075 1411 aa33.59■■■□□ 2.97
PLXNB3-207ENST00000482654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.53■■■□□ 2.96
PLXNB3-207ENST00000482654 HNRNPUL2Q1KMD3 747 aaKnown RBP33.53■■■□□ 2.96
PLXNB3-207ENST00000482654 FRMPD1Q5SYB0 1578 aa33.52■■■□□ 2.96
PLXNB3-207ENST00000482654 NEO1Q92859 1461 aa33.5■■■□□ 2.95
PLXNB3-207ENST00000482654 ILDR1Q86SU0 546 aaPredicted RBP33.49■■■□□ 2.95
PLXNB3-207ENST00000482654 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
PLXNB3-207ENST00000482654 RAPGEF3O95398 923 aa33.46■■■□□ 2.95
PLXNB3-207ENST00000482654 EFCAB5A4FU69 1503 aa33.43■■■□□ 2.94
PLXNB3-207ENST00000482654 ADAMTSL3P82987 1691 aa33.42■■■□□ 2.94
PLXNB3-207ENST00000482654 TTC37Q6PGP7 1564 aa33.36■■■□□ 2.93
PLXNB3-207ENST00000482654 ARHGEF40Q8TER5 1519 aa33.35■■■□□ 2.93
PLXNB3-207ENST00000482654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.34■■■□□ 2.93
PLXNB3-207ENST00000482654 BCORL1Q5H9F3 1711 aa33.34■■■□□ 2.93
PLXNB3-207ENST00000482654 PTPRMP28827 1452 aa33.34■■■□□ 2.93
PLXNB3-207ENST00000482654 RICTORQ6R327 1708 aa33.33■■■□□ 2.93
PLXNB3-207ENST00000482654 CDK13Q14004 1512 aaKnown RBP33.32■■■□□ 2.92
PLXNB3-207ENST00000482654 MADDQ8WXG6 1647 aa33.31■■■□□ 2.92
PLXNB3-207ENST00000482654 CFAP74Q9C0B2 1584 aa33.3■■■□□ 2.92
PLXNB3-207ENST00000482654 PLEKHD1A6NEE1 506 aa33.29■■■□□ 2.92
PLXNB3-207ENST00000482654 FANCAO15360 1455 aa33.29■■■□□ 2.92
PLXNB3-207ENST00000482654 DENND4BO75064 1496 aaPredicted RBP33.28■■■□□ 2.92
PLXNB3-207ENST00000482654 AKNAQ7Z591 1439 aa33.26■■■□□ 2.91
PLXNB3-207ENST00000482654 ARID4BQ4LE39 1312 aaPredicted RBP33.23■■■□□ 2.91
PLXNB3-207ENST00000482654 EHMT2Q96KQ7 1210 aa33.22■■■□□ 2.91
PLXNB3-207ENST00000482654 ZMYM4Q5VZL5 1548 aa33.19■■■□□ 2.9
PLXNB3-207ENST00000482654 RIMS1Q86UR5 1692 aaKnown RBP33.19■■■□□ 2.9
PLXNB3-207ENST00000482654 HECW1Q76N89 1606 aa33.16■■■□□ 2.9
PLXNB3-207ENST00000482654 SIGLEC1Q9BZZ2 1709 aa33.16■■■□□ 2.9
PLXNB3-207ENST00000482654 ZFYVE16Q7Z3T8 1539 aa33.14■■■□□ 2.9
PLXNB3-207ENST00000482654 YEATS2Q9ULM3 1422 aa33.12■■■□□ 2.89
PLXNB3-207ENST00000482654 PCF11O94913 1555 aaKnown RBP33.12■■■□□ 2.89
PLXNB3-207ENST00000482654 ARHGAP35Q9NRY4 1499 aa33.12■■■□□ 2.89
PLXNB3-207ENST00000482654 LMTK3Q96Q04 1460 aa33.08■■■□□ 2.89
PLXNB3-207ENST00000482654 UBTFP17480 764 aaKnown RBP33.08■■■□□ 2.89
PLXNB3-207ENST00000482654 FMN1Q68DA7 1419 aa33.08■■■□□ 2.89
PLXNB3-207ENST00000482654 POGZQ7Z3K3 1410 aa33.06■■■□□ 2.88
PLXNB3-207ENST00000482654 PLCH2O75038 1416 aa33.05■■■□□ 2.88
PLXNB3-207ENST00000482654 KIF14Q15058 1648 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms