RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
SPTLC1-206ENST00000482632 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
SPTLC1-206ENST00000482632 KIF27Q86VH2 1401 aa16.96■□□□□ 0.3
SPTLC1-206ENST00000482632 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
SPTLC1-206ENST00000482632 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
SPTLC1-206ENST00000482632 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SPTLC1-206ENST00000482632 CUL7Q14999 1698 aa16.88■□□□□ 0.29
SPTLC1-206ENST00000482632 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
SPTLC1-206ENST00000482632 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
SPTLC1-206ENST00000482632 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
SPTLC1-206ENST00000482632 ARHGEF11O15085 1522 aa16.83■□□□□ 0.28
SPTLC1-206ENST00000482632 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
SPTLC1-206ENST00000482632 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
SPTLC1-206ENST00000482632 IGF1RP08069 1367 aa16.82■□□□□ 0.28
SPTLC1-206ENST00000482632 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
SPTLC1-206ENST00000482632 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
SPTLC1-206ENST00000482632 NUP160Q12769 1436 aa16.77■□□□□ 0.27
SPTLC1-206ENST00000482632 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
SPTLC1-206ENST00000482632 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
SPTLC1-206ENST00000482632 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
SPTLC1-206ENST00000482632 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
SPTLC1-206ENST00000482632 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
SPTLC1-206ENST00000482632 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
SPTLC1-206ENST00000482632 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
SPTLC1-206ENST00000482632 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
SPTLC1-206ENST00000482632 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
SPTLC1-206ENST00000482632 EEA1Q15075 1411 aa16.62■□□□□ 0.25
SPTLC1-206ENST00000482632 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
SPTLC1-206ENST00000482632 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
SPTLC1-206ENST00000482632 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
SPTLC1-206ENST00000482632 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
SPTLC1-206ENST00000482632 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
SPTLC1-206ENST00000482632 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
SPTLC1-206ENST00000482632 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
SPTLC1-206ENST00000482632 CARMIL2Q6F5E8 1435 aa16.51■□□□□ 0.23
SPTLC1-206ENST00000482632 KIF21BO75037 1637 aa16.49■□□□□ 0.23
SPTLC1-206ENST00000482632 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
SPTLC1-206ENST00000482632 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
SPTLC1-206ENST00000482632 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
SPTLC1-206ENST00000482632 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
SPTLC1-206ENST00000482632 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
SPTLC1-206ENST00000482632 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
SPTLC1-206ENST00000482632 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
SPTLC1-206ENST00000482632 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
SPTLC1-206ENST00000482632 PTPRGP23470 1445 aa16.42■□□□□ 0.22
SPTLC1-206ENST00000482632 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
SPTLC1-206ENST00000482632 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
SPTLC1-206ENST00000482632 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
SPTLC1-206ENST00000482632 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPTLC1-206ENST00000482632 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
SPTLC1-206ENST00000482632 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
SPTLC1-206ENST00000482632 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
SPTLC1-206ENST00000482632 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
SPTLC1-206ENST00000482632 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
SPTLC1-206ENST00000482632 PLB1Q6P1J6 1458 aa16.27■□□□□ 0.19
SPTLC1-206ENST00000482632 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.19
SPTLC1-206ENST00000482632 EFCAB5A4FU69 1503 aa16.25■□□□□ 0.19
SPTLC1-206ENST00000482632 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
SPTLC1-206ENST00000482632 UHRF1BP1LA0JNW5 1464 aa16.24■□□□□ 0.19
SPTLC1-206ENST00000482632 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
SPTLC1-206ENST00000482632 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
SPTLC1-206ENST00000482632 ABCA8O94911 1581 aa16.22■□□□□ 0.19
SPTLC1-206ENST00000482632 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
SPTLC1-206ENST00000482632 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
SPTLC1-206ENST00000482632 RNF39Q9H2S5 420 aa16.2■□□□□ 0.18
SPTLC1-206ENST00000482632 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
SPTLC1-206ENST00000482632 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
SPTLC1-206ENST00000482632 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
SPTLC1-206ENST00000482632 DIP2BQ9P265 1576 aa16.17■□□□□ 0.18
SPTLC1-206ENST00000482632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
SPTLC1-206ENST00000482632 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
SPTLC1-206ENST00000482632 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
SPTLC1-206ENST00000482632 ARHGAP35Q9NRY4 1499 aa16.16■□□□□ 0.18
SPTLC1-206ENST00000482632 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
SPTLC1-206ENST00000482632 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
SPTLC1-206ENST00000482632 CLIP1P30622 1438 aa16.11■□□□□ 0.17
SPTLC1-206ENST00000482632 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
SPTLC1-206ENST00000482632 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
SPTLC1-206ENST00000482632 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
SPTLC1-206ENST00000482632 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
SPTLC1-206ENST00000482632 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
SPTLC1-206ENST00000482632 HECW1Q76N89 1606 aa16.08■□□□□ 0.17
SPTLC1-206ENST00000482632 ATP10BO94823 1461 aa16.08■□□□□ 0.16
SPTLC1-206ENST00000482632 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
SPTLC1-206ENST00000482632 KDM4FA0A1W2PPD8 638 aa16.06■□□□□ 0.16
SPTLC1-206ENST00000482632 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
SPTLC1-206ENST00000482632 PCF11O94913 1555 aaKnown RBP16.04■□□□□ 0.16
SPTLC1-206ENST00000482632 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
SPTLC1-206ENST00000482632 GLI2P10070 1586 aa16.04■□□□□ 0.16
SPTLC1-206ENST00000482632 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
SPTLC1-206ENST00000482632 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
SPTLC1-206ENST00000482632 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
SPTLC1-206ENST00000482632 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
SPTLC1-206ENST00000482632 PPRC1Q5VV67 1664 aaKnown RBP15.99■□□□□ 0.15
SPTLC1-206ENST00000482632 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
SPTLC1-206ENST00000482632 ZBTB22O15209 634 aa15.96■□□□□ 0.15
SPTLC1-206ENST00000482632 KDM6BO15054 1643 aa15.96■□□□□ 0.15
SPTLC1-206ENST00000482632 CD109Q6YHK3 1445 aa15.95■□□□□ 0.14
SPTLC1-206ENST00000482632 CASKIN1Q8WXD9 1431 aa15.95■□□□□ 0.14
SPTLC1-206ENST00000482632 FYCO1Q9BQS8 1478 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms