RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 ARHGAP35Q9NRY4 1499 aa34.46■■■■□ 3.11
RUNX1-216ENST00000482318 EFCAB5A4FU69 1503 aa34.35■■■■□ 3.09
RUNX1-216ENST00000482318 PPARGC1BQ86YN6 1023 aaKnown RBP34.3■■■■□ 3.08
RUNX1-216ENST00000482318 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
RUNX1-216ENST00000482318 APLP2Q06481 763 aa34.29■■■■□ 3.08
RUNX1-216ENST00000482318 MAGI1Q96QZ7 1491 aaPredicted RBP34.28■■■■□ 3.08
RUNX1-216ENST00000482318 SAMD9Q5K651 1589 aa34.16■■■■□ 3.06
RUNX1-216ENST00000482318 IQGAP2Q13576 1575 aa34.15■■■■□ 3.06
RUNX1-216ENST00000482318 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
RUNX1-216ENST00000482318 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
RUNX1-216ENST00000482318 FHOD3Q2V2M9 1422 aa34.07■■■■□ 3.04
RUNX1-216ENST00000482318 TTBK1Q5TCY1 1321 aaPredicted RBP34.03■■■■□ 3.04
RUNX1-216ENST00000482318 MAP3K1Q13233 1512 aa34.02■■■■□ 3.04
RUNX1-216ENST00000482318 KIAA0586Q9BVV6 1533 aa34.02■■■■□ 3.04
RUNX1-216ENST00000482318 FMN1Q68DA7 1419 aa34.02■■■■□ 3.04
RUNX1-216ENST00000482318 P3H3Q8IVL6 736 aa34.01■■■■□ 3.03
RUNX1-216ENST00000482318 CHMP7Q8WUX9 453 aaPredicted RBP34■■■■□ 3.03
RUNX1-216ENST00000482318 PCF11O94913 1555 aaKnown RBP33.99■■■■□ 3.03
RUNX1-216ENST00000482318 FYCO1Q9BQS8 1478 aa33.97■■■■□ 3.03
RUNX1-216ENST00000482318 UGGT2Q9NYU1 1516 aa33.97■■■■□ 3.03
RUNX1-216ENST00000482318 TIAM1Q13009 1591 aa33.93■■■■□ 3.02
RUNX1-216ENST00000482318 CASKIN1Q8WXD9 1431 aa33.93■■■■□ 3.02
RUNX1-216ENST00000482318 CEP170Q5SW79 1584 aa33.9■■■■□ 3.02
RUNX1-216ENST00000482318 CFAP43Q8NDM7 1665 aa33.9■■■■□ 3.02
RUNX1-216ENST00000482318 NUP160Q12769 1436 aa33.87■■■■□ 3.01
RUNX1-216ENST00000482318 FBLN2P98095 1184 aa33.84■■■■□ 3.01
RUNX1-216ENST00000482318 KANK4Q5T7N3 995 aaPredicted RBP33.81■■■■□ 3
RUNX1-216ENST00000482318 KIAA0556O60303 1618 aa33.78■■■■□ 3
RUNX1-216ENST00000482318 LRRC9Q6ZRR7 1453 aa33.74■■■□□ 2.99
RUNX1-216ENST00000482318 CHD1O14646 1710 aa33.73■■■□□ 2.99
RUNX1-216ENST00000482318 DISP1Q96F81 1524 aa33.73■■■□□ 2.99
RUNX1-216ENST00000482318 HRCP23327 699 aa33.73■■■□□ 2.99
RUNX1-216ENST00000482318 ATP1B4Q9UN42 357 aaPredicted RBP33.71■■■□□ 2.99
RUNX1-216ENST00000482318 HECW1Q76N89 1606 aa33.67■■■□□ 2.98
RUNX1-216ENST00000482318 LRRIQ1Q96JM4 1722 aa33.64■■■□□ 2.98
RUNX1-216ENST00000482318 CARMIL2Q6F5E8 1435 aa33.62■■■□□ 2.97
RUNX1-216ENST00000482318 CCDC18Q5T9S5 1454 aa33.62■■■□□ 2.97
RUNX1-216ENST00000482318 RRBP1Q9P2E9 1410 aaKnown RBP33.58■■■□□ 2.97
RUNX1-216ENST00000482318 JPH4Q96JJ6 628 aa33.58■■■□□ 2.97
RUNX1-216ENST00000482318 RAPGEF6Q8TEU7 1601 aa33.49■■■□□ 2.95
RUNX1-216ENST00000482318 MTUS2Q5JR59 1369 aa33.48■■■□□ 2.95
RUNX1-216ENST00000482318 EHBP1L1Q8N3D4 1523 aa33.48■■■□□ 2.95
RUNX1-216ENST00000482318 EPRSP07814 1512 aaKnown RBP33.47■■■□□ 2.95
RUNX1-216ENST00000482318 CCNB3Q8WWL7 1395 aa33.45■■■□□ 2.95
RUNX1-216ENST00000482318 SHROOM2Q13796 1616 aa33.43■■■□□ 2.94
RUNX1-216ENST00000482318 SUPT6HQ7KZ85 1726 aaKnown RBP33.41■■■□□ 2.94
RUNX1-216ENST00000482318 PHLDB1Q86UU1 1377 aa33.39■■■□□ 2.94
RUNX1-216ENST00000482318 ZEB1P37275 1124 aaPredicted RBP33.38■■■□□ 2.93
RUNX1-216ENST00000482318 HNRNPUL2Q1KMD3 747 aaKnown RBP33.37■■■□□ 2.93
RUNX1-216ENST00000482318 PRG4Q92954 1404 aaPredicted RBP33.37■■■□□ 2.93
RUNX1-216ENST00000482318 NUP153P49790 1475 aaKnown RBP33.35■■■□□ 2.93
RUNX1-216ENST00000482318 CDK13Q14004 1512 aaKnown RBP33.34■■■□□ 2.93
RUNX1-216ENST00000482318 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
RUNX1-216ENST00000482318 MAGI3Q5TCQ9 1506 aa33.3■■■□□ 2.92
RUNX1-216ENST00000482318 NCOA2Q15596 1464 aa33.29■■■□□ 2.92
RUNX1-216ENST00000482318 PLB1Q6P1J6 1458 aa33.27■■■□□ 2.92
RUNX1-216ENST00000482318 ABCA8O94911 1581 aa33.26■■■□□ 2.92
RUNX1-216ENST00000482318 ARHGEF11O15085 1522 aa33.25■■■□□ 2.91
RUNX1-216ENST00000482318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.23■■■□□ 2.91
RUNX1-216ENST00000482318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.22■■■□□ 2.91
RUNX1-216ENST00000482318 CCER1Q8TC90 406 aaPredicted RBP33.21■■■□□ 2.91
RUNX1-216ENST00000482318 CDK11AQ9UQ88 783 aaPredicted RBP33.21■■■□□ 2.91
RUNX1-216ENST00000482318 FGD6Q6ZV73 1430 aa33.21■■■□□ 2.91
RUNX1-216ENST00000482318 PTPRGP23470 1445 aa33.2■■■□□ 2.91
RUNX1-216ENST00000482318 MYOM3Q5VTT5 1437 aa33.19■■■□□ 2.9
RUNX1-216ENST00000482318 ARID3CA6NKF2 412 aa33.13■■■□□ 2.89
RUNX1-216ENST00000482318 FAM50AQ14320 339 aaKnown RBP33.12■■■□□ 2.89
RUNX1-216ENST00000482318 TROQ12816 1431 aaPredicted RBP33.07■■■□□ 2.88
RUNX1-216ENST00000482318 ERCC6L2Q5T890 1561 aa33.06■■■□□ 2.88
RUNX1-216ENST00000482318 ADCY10Q96PN6 1610 aa33.04■■■□□ 2.88
RUNX1-216ENST00000482318 PTPN23Q9H3S7 1636 aa33.04■■■□□ 2.88
RUNX1-216ENST00000482318 ITGAEP38570 1179 aa33.03■■■□□ 2.88
RUNX1-216ENST00000482318 UACAQ9BZF9 1416 aa33.03■■■□□ 2.88
RUNX1-216ENST00000482318 MIA2Q96PC5 1412 aa33.02■■■□□ 2.88
RUNX1-216ENST00000482318 ATP10BO94823 1461 aa33.01■■■□□ 2.88
RUNX1-216ENST00000482318 TCOF1Q13428 1488 aaKnown RBP32.99■■■□□ 2.87
RUNX1-216ENST00000482318 ABCC2Q92887 1545 aa32.96■■■□□ 2.87
RUNX1-216ENST00000482318 ITSN2Q9NZM3 1697 aa32.94■■■□□ 2.86
RUNX1-216ENST00000482318 PLEKHD1A6NEE1 506 aa32.92■■■□□ 2.86
RUNX1-216ENST00000482318 KIF14Q15058 1648 aa32.91■■■□□ 2.86
RUNX1-216ENST00000482318 OSCARQ8IYS5 282 aa32.88■■■□□ 2.85
RUNX1-216ENST00000482318 SETD5Q9C0A6 1442 aa32.87■■■□□ 2.85
RUNX1-216ENST00000482318 UHRF1BP1LA0JNW5 1464 aa32.87■■■□□ 2.85
RUNX1-216ENST00000482318 RAB3GAP2Q9H2M9 1393 aa32.82■■■□□ 2.84
RUNX1-216ENST00000482318 CLSPNQ9HAW4 1339 aa32.79■■■□□ 2.84
RUNX1-216ENST00000482318 DHX57Q6P158 1386 aaKnown RBP32.77■■■□□ 2.84
RUNX1-216ENST00000482318 GPATCH8Q9UKJ3 1502 aaKnown RBP32.76■■■□□ 2.84
RUNX1-216ENST00000482318 ABCC10Q5T3U5 1492 aa32.75■■■□□ 2.83
RUNX1-216ENST00000482318 PTPRKQ15262 1439 aa32.74■■■□□ 2.83
RUNX1-216ENST00000482318 CDC42BPAQ5VT25 1732 aa32.74■■■□□ 2.83
RUNX1-216ENST00000482318 HFM1A2PYH4 1435 aa32.73■■■□□ 2.83
RUNX1-216ENST00000482318 ZCCHC11Q5TAX3 1644 aaKnown RBP32.73■■■□□ 2.83
RUNX1-216ENST00000482318 KDM5BQ9UGL1 1544 aa32.72■■■□□ 2.83
RUNX1-216ENST00000482318 DNMT1P26358 1616 aaKnown RBP32.7■■■□□ 2.83
RUNX1-216ENST00000482318 CFDP1Q9UEE9 299 aaPredicted RBP32.69■■■□□ 2.82
RUNX1-216ENST00000482318 AKNAQ7Z591 1439 aa32.68■■■□□ 2.82
RUNX1-216ENST00000482318 CAMSAP2Q08AD1 1489 aa32.67■■■□□ 2.82
RUNX1-216ENST00000482318 GCC2Q8IWJ2 1684 aa32.64■■■□□ 2.82
RUNX1-216ENST00000482318 DAPK1P53355 1430 aa32.63■■■□□ 2.81
RUNX1-216ENST00000482318 NAIPQ13075 1403 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms