RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
DDX39B-220ENST00000482195 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
DDX39B-220ENST00000482195 NUP160Q12769 1436 aa18.47■□□□□ 0.55
DDX39B-220ENST00000482195 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
DDX39B-220ENST00000482195 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
DDX39B-220ENST00000482195 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
DDX39B-220ENST00000482195 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
DDX39B-220ENST00000482195 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
DDX39B-220ENST00000482195 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
DDX39B-220ENST00000482195 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
DDX39B-220ENST00000482195 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
DDX39B-220ENST00000482195 CUL7Q14999 1698 aa18.21■□□□□ 0.51
DDX39B-220ENST00000482195 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
DDX39B-220ENST00000482195 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
DDX39B-220ENST00000482195 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
DDX39B-220ENST00000482195 MAPKBP1O60336 1514 aa18.16■□□□□ 0.5
DDX39B-220ENST00000482195 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
DDX39B-220ENST00000482195 ABCC10Q5T3U5 1492 aa18.15■□□□□ 0.5
DDX39B-220ENST00000482195 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
DDX39B-220ENST00000482195 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
DDX39B-220ENST00000482195 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
DDX39B-220ENST00000482195 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
DDX39B-220ENST00000482195 KDM6BO15054 1643 aa18.09■□□□□ 0.49
DDX39B-220ENST00000482195 IGF1RP08069 1367 aa18.08■□□□□ 0.49
DDX39B-220ENST00000482195 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
DDX39B-220ENST00000482195 IQGAP2Q13576 1575 aa18.02■□□□□ 0.48
DDX39B-220ENST00000482195 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
DDX39B-220ENST00000482195 PTPRGP23470 1445 aa18■□□□□ 0.47
DDX39B-220ENST00000482195 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
DDX39B-220ENST00000482195 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
DDX39B-220ENST00000482195 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
DDX39B-220ENST00000482195 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
DDX39B-220ENST00000482195 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
DDX39B-220ENST00000482195 PPRC1Q5VV67 1664 aaKnown RBP17.91■□□□□ 0.46
DDX39B-220ENST00000482195 PLB1Q6P1J6 1458 aa17.89■□□□□ 0.45
DDX39B-220ENST00000482195 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
DDX39B-220ENST00000482195 GLI2P10070 1586 aa17.87■□□□□ 0.45
DDX39B-220ENST00000482195 UACAQ9BZF9 1416 aa17.87■□□□□ 0.45
DDX39B-220ENST00000482195 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
DDX39B-220ENST00000482195 ZCCHC11Q5TAX3 1644 aaKnown RBP17.87■□□□□ 0.45
DDX39B-220ENST00000482195 KIAA0556O60303 1618 aa17.86■□□□□ 0.45
DDX39B-220ENST00000482195 CTTNBP2Q8WZ74 1663 aa17.85■□□□□ 0.45
DDX39B-220ENST00000482195 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
DDX39B-220ENST00000482195 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
DDX39B-220ENST00000482195 KDM4FA0A1W2PPD8 638 aa17.83■□□□□ 0.44
DDX39B-220ENST00000482195 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
DDX39B-220ENST00000482195 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
DDX39B-220ENST00000482195 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
DDX39B-220ENST00000482195 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
DDX39B-220ENST00000482195 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.44
DDX39B-220ENST00000482195 ADGRL1O94910 1474 aa17.76■□□□□ 0.43
DDX39B-220ENST00000482195 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
DDX39B-220ENST00000482195 WDR7Q9Y4E6 1490 aa17.72■□□□□ 0.43
DDX39B-220ENST00000482195 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
DDX39B-220ENST00000482195 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
DDX39B-220ENST00000482195 CFAP43Q8NDM7 1665 aa17.69■□□□□ 0.42
DDX39B-220ENST00000482195 ABCA8O94911 1581 aa17.66■□□□□ 0.42
DDX39B-220ENST00000482195 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
DDX39B-220ENST00000482195 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
DDX39B-220ENST00000482195 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
DDX39B-220ENST00000482195 MSH5O43196 834 aa17.61■□□□□ 0.41
DDX39B-220ENST00000482195 HECW2Q9P2P5 1572 aa17.6■□□□□ 0.41
DDX39B-220ENST00000482195 KIF21BO75037 1637 aa17.58■□□□□ 0.41
DDX39B-220ENST00000482195 MAGI3Q5TCQ9 1506 aa17.58■□□□□ 0.41
DDX39B-220ENST00000482195 PRXQ9BXM0 1461 aa17.58■□□□□ 0.41
DDX39B-220ENST00000482195 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
DDX39B-220ENST00000482195 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
DDX39B-220ENST00000482195 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
DDX39B-220ENST00000482195 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
DDX39B-220ENST00000482195 P3H3Q8IVL6 736 aa17.53■□□□□ 0.4
DDX39B-220ENST00000482195 ILDR1Q86SU0 546 aaPredicted RBP17.51■□□□□ 0.39
DDX39B-220ENST00000482195 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
DDX39B-220ENST00000482195 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
DDX39B-220ENST00000482195 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
DDX39B-220ENST00000482195 ATP10BO94823 1461 aa17.47■□□□□ 0.39
DDX39B-220ENST00000482195 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
DDX39B-220ENST00000482195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
DDX39B-220ENST00000482195 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
DDX39B-220ENST00000482195 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
DDX39B-220ENST00000482195 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
DDX39B-220ENST00000482195 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
DDX39B-220ENST00000482195 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
DDX39B-220ENST00000482195 NEO1Q92859 1461 aa17.37■□□□□ 0.37
DDX39B-220ENST00000482195 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
DDX39B-220ENST00000482195 PHLDB1Q86UU1 1377 aa17.36■□□□□ 0.37
DDX39B-220ENST00000482195 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
DDX39B-220ENST00000482195 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
DDX39B-220ENST00000482195 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
DDX39B-220ENST00000482195 MADDQ8WXG6 1647 aa17.33■□□□□ 0.37
DDX39B-220ENST00000482195 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
DDX39B-220ENST00000482195 ARID4BQ4LE39 1312 aaPredicted RBP17.33■□□□□ 0.36
DDX39B-220ENST00000482195 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
DDX39B-220ENST00000482195 PTPRMP28827 1452 aa17.32■□□□□ 0.36
DDX39B-220ENST00000482195 EEA1Q15075 1411 aa17.32■□□□□ 0.36
DDX39B-220ENST00000482195 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
DDX39B-220ENST00000482195 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
DDX39B-220ENST00000482195 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
DDX39B-220ENST00000482195 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
DDX39B-220ENST00000482195 DENND4BO75064 1496 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-220ENST00000482195 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms