RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
LINC02004-201ENST00000482019 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
LINC02004-201ENST00000482019 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
LINC02004-201ENST00000482019 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
LINC02004-201ENST00000482019 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
LINC02004-201ENST00000482019 PRXQ9BXM0 1461 aa17.38■□□□□ 0.37
LINC02004-201ENST00000482019 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
LINC02004-201ENST00000482019 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
LINC02004-201ENST00000482019 EEA1Q15075 1411 aa17.35■□□□□ 0.37
LINC02004-201ENST00000482019 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
LINC02004-201ENST00000482019 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
LINC02004-201ENST00000482019 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
LINC02004-201ENST00000482019 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
LINC02004-201ENST00000482019 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
LINC02004-201ENST00000482019 PTPRGP23470 1445 aa17.29■□□□□ 0.36
LINC02004-201ENST00000482019 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
LINC02004-201ENST00000482019 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
LINC02004-201ENST00000482019 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
LINC02004-201ENST00000482019 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
LINC02004-201ENST00000482019 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
LINC02004-201ENST00000482019 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
LINC02004-201ENST00000482019 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
LINC02004-201ENST00000482019 UHRF1BP1LA0JNW5 1464 aa17.19■□□□□ 0.34
LINC02004-201ENST00000482019 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
LINC02004-201ENST00000482019 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
LINC02004-201ENST00000482019 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
LINC02004-201ENST00000482019 KIF21BO75037 1637 aa17.17■□□□□ 0.34
LINC02004-201ENST00000482019 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
LINC02004-201ENST00000482019 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
LINC02004-201ENST00000482019 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
LINC02004-201ENST00000482019 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
LINC02004-201ENST00000482019 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
LINC02004-201ENST00000482019 FAM69CQ0P6D2 419 aa17.08■□□□□ 0.32
LINC02004-201ENST00000482019 ABCA8O94911 1581 aa17.07■□□□□ 0.32
LINC02004-201ENST00000482019 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
LINC02004-201ENST00000482019 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
LINC02004-201ENST00000482019 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
LINC02004-201ENST00000482019 P3H3Q8IVL6 736 aa17.02■□□□□ 0.32
LINC02004-201ENST00000482019 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
LINC02004-201ENST00000482019 GLI2P10070 1586 aa17.01■□□□□ 0.31
LINC02004-201ENST00000482019 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
LINC02004-201ENST00000482019 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
LINC02004-201ENST00000482019 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.31
LINC02004-201ENST00000482019 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
LINC02004-201ENST00000482019 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.3
LINC02004-201ENST00000482019 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.3
LINC02004-201ENST00000482019 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
LINC02004-201ENST00000482019 ATP10BO94823 1461 aa16.92■□□□□ 0.3
LINC02004-201ENST00000482019 MAP3K4Q9Y6R4 1608 aa16.91■□□□□ 0.3
LINC02004-201ENST00000482019 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
LINC02004-201ENST00000482019 PPRC1Q5VV67 1664 aaKnown RBP16.88■□□□□ 0.29
LINC02004-201ENST00000482019 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
LINC02004-201ENST00000482019 KDM6BO15054 1643 aa16.88■□□□□ 0.29
LINC02004-201ENST00000482019 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
LINC02004-201ENST00000482019 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
LINC02004-201ENST00000482019 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
LINC02004-201ENST00000482019 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
LINC02004-201ENST00000482019 CFAP43Q8NDM7 1665 aa16.85■□□□□ 0.29
LINC02004-201ENST00000482019 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
LINC02004-201ENST00000482019 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
LINC02004-201ENST00000482019 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
LINC02004-201ENST00000482019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
LINC02004-201ENST00000482019 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
LINC02004-201ENST00000482019 HECW1Q76N89 1606 aa16.78■□□□□ 0.28
LINC02004-201ENST00000482019 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
LINC02004-201ENST00000482019 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
LINC02004-201ENST00000482019 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
LINC02004-201ENST00000482019 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
LINC02004-201ENST00000482019 CLIP1P30622 1438 aa16.72■□□□□ 0.27
LINC02004-201ENST00000482019 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
LINC02004-201ENST00000482019 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
LINC02004-201ENST00000482019 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
LINC02004-201ENST00000482019 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
LINC02004-201ENST00000482019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC02004-201ENST00000482019 ARAP3Q8WWN8 1544 aa16.67■□□□□ 0.26
LINC02004-201ENST00000482019 CDK11AQ9UQ88 783 aaPredicted RBP16.67■□□□□ 0.26
LINC02004-201ENST00000482019 NEO1Q92859 1461 aa16.67■□□□□ 0.26
LINC02004-201ENST00000482019 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
LINC02004-201ENST00000482019 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
LINC02004-201ENST00000482019 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
LINC02004-201ENST00000482019 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
LINC02004-201ENST00000482019 CFAP74Q9C0B2 1584 aa16.63■□□□□ 0.25
LINC02004-201ENST00000482019 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
LINC02004-201ENST00000482019 KIF14Q15058 1648 aa16.62■□□□□ 0.25
LINC02004-201ENST00000482019 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
LINC02004-201ENST00000482019 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
LINC02004-201ENST00000482019 FANCAO15360 1455 aa16.6■□□□□ 0.25
LINC02004-201ENST00000482019 PLCH2O75038 1416 aa16.57■□□□□ 0.24
LINC02004-201ENST00000482019 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
LINC02004-201ENST00000482019 MYO5CQ9NQX4 1742 aa16.55■□□□□ 0.24
LINC02004-201ENST00000482019 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
LINC02004-201ENST00000482019 DENND4BO75064 1496 aaPredicted RBP16.54■□□□□ 0.24
LINC02004-201ENST00000482019 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
LINC02004-201ENST00000482019 RAPGEF3O95398 923 aa16.52■□□□□ 0.24
LINC02004-201ENST00000482019 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
LINC02004-201ENST00000482019 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
LINC02004-201ENST00000482019 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
LINC02004-201ENST00000482019 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
LINC02004-201ENST00000482019 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
LINC02004-201ENST00000482019 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms