RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
GRIA1-205ENST00000481559 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
GRIA1-205ENST00000481559 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
GRIA1-205ENST00000481559 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
GRIA1-205ENST00000481559 NUP160Q12769 1436 aa16.63■□□□□ 0.25
GRIA1-205ENST00000481559 CLIP1P30622 1438 aa16.62■□□□□ 0.25
GRIA1-205ENST00000481559 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
GRIA1-205ENST00000481559 TTBK1Q5TCY1 1321 aaPredicted RBP16.59■□□□□ 0.25
GRIA1-205ENST00000481559 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
GRIA1-205ENST00000481559 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
GRIA1-205ENST00000481559 ARAP1Q96P48 1450 aa16.57■□□□□ 0.24
GRIA1-205ENST00000481559 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
GRIA1-205ENST00000481559 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
GRIA1-205ENST00000481559 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
GRIA1-205ENST00000481559 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
GRIA1-205ENST00000481559 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
GRIA1-205ENST00000481559 PPARGC1BQ86YN6 1023 aaKnown RBP16.5■□□□□ 0.23
GRIA1-205ENST00000481559 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
GRIA1-205ENST00000481559 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
GRIA1-205ENST00000481559 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
GRIA1-205ENST00000481559 PRG4Q92954 1404 aaPredicted RBP16.46■□□□□ 0.23
GRIA1-205ENST00000481559 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
GRIA1-205ENST00000481559 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
GRIA1-205ENST00000481559 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
GRIA1-205ENST00000481559 EFCAB5A4FU69 1503 aa16.41■□□□□ 0.22
GRIA1-205ENST00000481559 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
GRIA1-205ENST00000481559 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
GRIA1-205ENST00000481559 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
GRIA1-205ENST00000481559 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
GRIA1-205ENST00000481559 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
GRIA1-205ENST00000481559 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.2
GRIA1-205ENST00000481559 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
GRIA1-205ENST00000481559 PTPRGP23470 1445 aa16.28■□□□□ 0.2
GRIA1-205ENST00000481559 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
GRIA1-205ENST00000481559 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
GRIA1-205ENST00000481559 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
GRIA1-205ENST00000481559 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
GRIA1-205ENST00000481559 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
GRIA1-205ENST00000481559 RAPGEF6Q8TEU7 1601 aa16.24■□□□□ 0.19
GRIA1-205ENST00000481559 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
GRIA1-205ENST00000481559 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
GRIA1-205ENST00000481559 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
GRIA1-205ENST00000481559 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
GRIA1-205ENST00000481559 ABCA8O94911 1581 aa16.22■□□□□ 0.19
GRIA1-205ENST00000481559 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
GRIA1-205ENST00000481559 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
GRIA1-205ENST00000481559 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
GRIA1-205ENST00000481559 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
GRIA1-205ENST00000481559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
GRIA1-205ENST00000481559 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
GRIA1-205ENST00000481559 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
GRIA1-205ENST00000481559 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
GRIA1-205ENST00000481559 ADCY10Q96PN6 1610 aa16.17■□□□□ 0.18
GRIA1-205ENST00000481559 APLP2Q06481 763 aa16.16■□□□□ 0.18
GRIA1-205ENST00000481559 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
GRIA1-205ENST00000481559 ATP10BO94823 1461 aa16.15■□□□□ 0.18
GRIA1-205ENST00000481559 ABCC2Q92887 1545 aa16.13■□□□□ 0.17
GRIA1-205ENST00000481559 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
GRIA1-205ENST00000481559 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
GRIA1-205ENST00000481559 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
GRIA1-205ENST00000481559 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
GRIA1-205ENST00000481559 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
GRIA1-205ENST00000481559 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
GRIA1-205ENST00000481559 KIF14Q15058 1648 aa16.04■□□□□ 0.16
GRIA1-205ENST00000481559 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
GRIA1-205ENST00000481559 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
GRIA1-205ENST00000481559 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
GRIA1-205ENST00000481559 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
GRIA1-205ENST00000481559 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
GRIA1-205ENST00000481559 NCOA2Q15596 1464 aa16■□□□□ 0.15
GRIA1-205ENST00000481559 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
GRIA1-205ENST00000481559 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
GRIA1-205ENST00000481559 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
GRIA1-205ENST00000481559 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
GRIA1-205ENST00000481559 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
GRIA1-205ENST00000481559 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
GRIA1-205ENST00000481559 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
GRIA1-205ENST00000481559 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
GRIA1-205ENST00000481559 ZNF644Q9H582 1327 aaPredicted RBP15.92■□□□□ 0.14
GRIA1-205ENST00000481559 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
GRIA1-205ENST00000481559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
GRIA1-205ENST00000481559 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
GRIA1-205ENST00000481559 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
GRIA1-205ENST00000481559 ITGAEP38570 1179 aa15.9■□□□□ 0.14
GRIA1-205ENST00000481559 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
GRIA1-205ENST00000481559 GPATCH8Q9UKJ3 1502 aaKnown RBP15.87■□□□□ 0.13
GRIA1-205ENST00000481559 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
GRIA1-205ENST00000481559 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
GRIA1-205ENST00000481559 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
GRIA1-205ENST00000481559 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
GRIA1-205ENST00000481559 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
GRIA1-205ENST00000481559 RRBP1Q9P2E9 1410 aaKnown RBP15.85■□□□□ 0.13
GRIA1-205ENST00000481559 CDC42BPBQ9Y5S2 1711 aa15.83■□□□□ 0.13
GRIA1-205ENST00000481559 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
GRIA1-205ENST00000481559 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
GRIA1-205ENST00000481559 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
GRIA1-205ENST00000481559 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
GRIA1-205ENST00000481559 FAM69CQ0P6D2 419 aa15.79■□□□□ 0.12
GRIA1-205ENST00000481559 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
GRIA1-205ENST00000481559 ABCA9Q8IUA7 1624 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms