RNA–Protein interactions for RNA: ENST00000481161.5

GCA-209, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-209ENST00000481161 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
GCA-209ENST00000481161 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
GCA-209ENST00000481161 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
GCA-209ENST00000481161 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
GCA-209ENST00000481161 IGF1RP08069 1367 aa17.12■□□□□ 0.33
GCA-209ENST00000481161 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
GCA-209ENST00000481161 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
GCA-209ENST00000481161 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
GCA-209ENST00000481161 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
GCA-209ENST00000481161 CUL7Q14999 1698 aa17.06■□□□□ 0.32
GCA-209ENST00000481161 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
GCA-209ENST00000481161 FOXD1Q16676 465 aa17.05■□□□□ 0.32
GCA-209ENST00000481161 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
GCA-209ENST00000481161 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
GCA-209ENST00000481161 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
GCA-209ENST00000481161 NUP160Q12769 1436 aa17■□□□□ 0.31
GCA-209ENST00000481161 SHROOM2Q13796 1616 aa16.98■□□□□ 0.31
GCA-209ENST00000481161 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
GCA-209ENST00000481161 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
GCA-209ENST00000481161 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
GCA-209ENST00000481161 CLIP1P30622 1438 aa16.93■□□□□ 0.3
GCA-209ENST00000481161 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
GCA-209ENST00000481161 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
GCA-209ENST00000481161 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
GCA-209ENST00000481161 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
GCA-209ENST00000481161 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
GCA-209ENST00000481161 ILDR1Q86SU0 546 aaPredicted RBP16.86■□□□□ 0.29
GCA-209ENST00000481161 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
GCA-209ENST00000481161 MAPKBP1O60336 1514 aa16.83■□□□□ 0.28
GCA-209ENST00000481161 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
GCA-209ENST00000481161 KDM6BO15054 1643 aa16.81■□□□□ 0.28
GCA-209ENST00000481161 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
GCA-209ENST00000481161 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
GCA-209ENST00000481161 TSPOAP1O95153 1857 aa16.76■□□□□ 0.27
GCA-209ENST00000481161 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
GCA-209ENST00000481161 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
GCA-209ENST00000481161 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
GCA-209ENST00000481161 APLP2Q06481 763 aa16.69■□□□□ 0.26
GCA-209ENST00000481161 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
GCA-209ENST00000481161 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
GCA-209ENST00000481161 KIAA0586Q9BVV6 1533 aa16.65■□□□□ 0.26
GCA-209ENST00000481161 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
GCA-209ENST00000481161 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
GCA-209ENST00000481161 P3H3Q8IVL6 736 aa16.6■□□□□ 0.25
GCA-209ENST00000481161 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
GCA-209ENST00000481161 PTPRGP23470 1445 aa16.59■□□□□ 0.25
GCA-209ENST00000481161 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
GCA-209ENST00000481161 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
GCA-209ENST00000481161 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
GCA-209ENST00000481161 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
GCA-209ENST00000481161 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
GCA-209ENST00000481161 GLI2P10070 1586 aa16.55■□□□□ 0.24
GCA-209ENST00000481161 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
GCA-209ENST00000481161 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
GCA-209ENST00000481161 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
GCA-209ENST00000481161 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
GCA-209ENST00000481161 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
GCA-209ENST00000481161 PPRC1Q5VV67 1664 aaKnown RBP16.53■□□□□ 0.24
GCA-209ENST00000481161 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
GCA-209ENST00000481161 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.23
GCA-209ENST00000481161 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.23
GCA-209ENST00000481161 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
GCA-209ENST00000481161 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
GCA-209ENST00000481161 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
GCA-209ENST00000481161 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
GCA-209ENST00000481161 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
GCA-209ENST00000481161 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
GCA-209ENST00000481161 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
GCA-209ENST00000481161 TEX14Q8IWB6 1497 aa16.46■□□□□ 0.23
GCA-209ENST00000481161 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
GCA-209ENST00000481161 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
GCA-209ENST00000481161 MAP3K4Q9Y6R4 1608 aa16.43■□□□□ 0.22
GCA-209ENST00000481161 EPRSP07814 1512 aaKnown RBP16.43■□□□□ 0.22
GCA-209ENST00000481161 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
GCA-209ENST00000481161 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
GCA-209ENST00000481161 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
GCA-209ENST00000481161 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
GCA-209ENST00000481161 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
GCA-209ENST00000481161 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
GCA-209ENST00000481161 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
GCA-209ENST00000481161 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
GCA-209ENST00000481161 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.21
GCA-209ENST00000481161 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
GCA-209ENST00000481161 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
GCA-209ENST00000481161 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
GCA-209ENST00000481161 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
GCA-209ENST00000481161 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
GCA-209ENST00000481161 ABCA8O94911 1581 aa16.26■□□□□ 0.19
GCA-209ENST00000481161 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
GCA-209ENST00000481161 SUPT6HQ7KZ85 1726 aaKnown RBP16.26■□□□□ 0.19
GCA-209ENST00000481161 NUP153P49790 1475 aaKnown RBP16.26■□□□□ 0.19
GCA-209ENST00000481161 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
GCA-209ENST00000481161 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
GCA-209ENST00000481161 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
GCA-209ENST00000481161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
GCA-209ENST00000481161 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
GCA-209ENST00000481161 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
GCA-209ENST00000481161 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
GCA-209ENST00000481161 NCOA2Q15596 1464 aa16.18■□□□□ 0.18
GCA-209ENST00000481161 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms