RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 JPH4Q96JJ6 628 aa34.17■■■■□ 3.06
VPS36-204ENST00000480923 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
VPS36-204ENST00000480923 KIAA0586Q9BVV6 1533 aa34.1■■■■□ 3.05
VPS36-204ENST00000480923 RAPGEF2Q9Y4G8 1499 aa34.02■■■■□ 3.04
VPS36-204ENST00000480923 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
VPS36-204ENST00000480923 IQGAP2Q13576 1575 aa33.87■■■■□ 3.01
VPS36-204ENST00000480923 PRXQ9BXM0 1461 aa33.82■■■■□ 3.01
VPS36-204ENST00000480923 CSRNP3Q8WYN3 585 aa33.79■■■■□ 3
VPS36-204ENST00000480923 CARMIL2Q6F5E8 1435 aa33.79■■■■□ 3
VPS36-204ENST00000480923 CHIC1Q5VXU3 224 aa33.78■■■■□ 3
VPS36-204ENST00000480923 EEA1Q15075 1411 aa33.74■■■□□ 2.99
VPS36-204ENST00000480923 TTBK1Q5TCY1 1321 aaPredicted RBP33.71■■■□□ 2.99
VPS36-204ENST00000480923 FAM9AQ8IZU1 332 aaPredicted RBP33.69■■■□□ 2.98
VPS36-204ENST00000480923 PTPRGP23470 1445 aa33.69■■■□□ 2.98
VPS36-204ENST00000480923 TNIKQ9UKE5 1360 aa33.68■■■□□ 2.98
VPS36-204ENST00000480923 UGGT2Q9NYU1 1516 aa33.67■■■□□ 2.98
VPS36-204ENST00000480923 DISP1Q96F81 1524 aa33.64■■■□□ 2.98
VPS36-204ENST00000480923 CTTNBP2Q8WZ74 1663 aa33.64■■■□□ 2.98
VPS36-204ENST00000480923 NPM1P06748 294 aaKnown RBP eCLIP33.62■■■□□ 2.97
VPS36-204ENST00000480923 ADCY10Q96PN6 1610 aa33.58■■■□□ 2.97
VPS36-204ENST00000480923 KIAA0556O60303 1618 aa33.54■■■□□ 2.96
VPS36-204ENST00000480923 GOLGA3Q08378 1498 aa33.5■■■□□ 2.95
VPS36-204ENST00000480923 UACAQ9BZF9 1416 aa33.45■■■□□ 2.94
VPS36-204ENST00000480923 MAPKBP1O60336 1514 aa33.42■■■□□ 2.94
VPS36-204ENST00000480923 UHRF1BP1LA0JNW5 1464 aa33.39■■■□□ 2.94
VPS36-204ENST00000480923 ABCC2Q92887 1545 aa33.38■■■□□ 2.93
VPS36-204ENST00000480923 KIF21BO75037 1637 aa33.38■■■□□ 2.93
VPS36-204ENST00000480923 ABCC10Q5T3U5 1492 aa33.32■■■□□ 2.92
VPS36-204ENST00000480923 FAM69CQ0P6D2 419 aa33.32■■■□□ 2.92
VPS36-204ENST00000480923 P3H3Q8IVL6 736 aa33.32■■■□□ 2.92
VPS36-204ENST00000480923 EHMT2Q96KQ7 1210 aa33.31■■■□□ 2.92
VPS36-204ENST00000480923 RANGAP1P46060 587 aaPredicted RBP33.3■■■□□ 2.92
VPS36-204ENST00000480923 PLB1Q6P1J6 1458 aa33.27■■■□□ 2.92
VPS36-204ENST00000480923 KIF13AQ9H1H9 1805 aa33.26■■■□□ 2.92
VPS36-204ENST00000480923 DIP2BQ9P265 1576 aa33.24■■■□□ 2.91
VPS36-204ENST00000480923 KDM5BQ9UGL1 1544 aa33.23■■■□□ 2.91
VPS36-204ENST00000480923 ASXL2Q76L83 1435 aa33.22■■■□□ 2.91
VPS36-204ENST00000480923 SAMD9Q5K651 1589 aa33.21■■■□□ 2.91
VPS36-204ENST00000480923 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
VPS36-204ENST00000480923 ABCA8O94911 1581 aa33.18■■■□□ 2.9
VPS36-204ENST00000480923 ZCCHC11Q5TAX3 1644 aaKnown RBP33.15■■■□□ 2.9
VPS36-204ENST00000480923 FHOD3Q2V2M9 1422 aa33.09■■■□□ 2.89
VPS36-204ENST00000480923 EFCAB5A4FU69 1503 aa33.05■■■□□ 2.88
VPS36-204ENST00000480923 ARID3CA6NKF2 412 aa33.03■■■□□ 2.88
VPS36-204ENST00000480923 EPRSP07814 1512 aaKnown RBP33.02■■■□□ 2.88
VPS36-204ENST00000480923 WDR7Q9Y4E6 1490 aa33■■■□□ 2.87
VPS36-204ENST00000480923 GLI2P10070 1586 aa33■■■□□ 2.87
VPS36-204ENST00000480923 RAPGEF6Q8TEU7 1601 aa32.97■■■□□ 2.87
VPS36-204ENST00000480923 ATP10BO94823 1461 aa32.94■■■□□ 2.86
VPS36-204ENST00000480923 TSPOAP1O95153 1857 aa32.94■■■□□ 2.86
VPS36-204ENST00000480923 KCNH8Q96L42 1107 aa32.91■■■□□ 2.86
VPS36-204ENST00000480923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.89■■■□□ 2.86
VPS36-204ENST00000480923 HNRNPUL2Q1KMD3 747 aaKnown RBP32.89■■■□□ 2.86
VPS36-204ENST00000480923 NUP153P49790 1475 aaKnown RBP32.86■■■□□ 2.85
VPS36-204ENST00000480923 ARHGAP35Q9NRY4 1499 aa32.86■■■□□ 2.85
VPS36-204ENST00000480923 MAP3K4Q9Y6R4 1608 aa32.82■■■□□ 2.84
VPS36-204ENST00000480923 PPRC1Q5VV67 1664 aaKnown RBP32.79■■■□□ 2.84
VPS36-204ENST00000480923 KDM6BO15054 1643 aa32.79■■■□□ 2.84
VPS36-204ENST00000480923 FMN1Q68DA7 1419 aa32.78■■■□□ 2.84
VPS36-204ENST00000480923 TEX14Q8IWB6 1497 aa32.75■■■□□ 2.83
VPS36-204ENST00000480923 CD109Q6YHK3 1445 aa32.75■■■□□ 2.83
VPS36-204ENST00000480923 ATP1B4Q9UN42 357 aaPredicted RBP32.73■■■□□ 2.83
VPS36-204ENST00000480923 CFAP43Q8NDM7 1665 aa32.69■■■□□ 2.82
VPS36-204ENST00000480923 PLEKHD1A6NEE1 506 aa32.68■■■□□ 2.82
VPS36-204ENST00000480923 MAGI3Q5TCQ9 1506 aa32.66■■■□□ 2.82
VPS36-204ENST00000480923 HECW1Q76N89 1606 aa32.63■■■□□ 2.81
VPS36-204ENST00000480923 CDK13Q14004 1512 aaKnown RBP32.63■■■□□ 2.81
VPS36-204ENST00000480923 CLIP1P30622 1438 aa32.63■■■□□ 2.81
VPS36-204ENST00000480923 ABCA9Q8IUA7 1624 aa32.59■■■□□ 2.81
VPS36-204ENST00000480923 COL17A1Q9UMD9 1497 aaPredicted RBP32.57■■■□□ 2.8
VPS36-204ENST00000480923 CDK11AQ9UQ88 783 aaPredicted RBP32.49■■■□□ 2.79
VPS36-204ENST00000480923 CASKIN1Q8WXD9 1431 aa32.49■■■□□ 2.79
VPS36-204ENST00000480923 PCF11O94913 1555 aaKnown RBP32.47■■■□□ 2.79
VPS36-204ENST00000480923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.43■■■□□ 2.78
VPS36-204ENST00000480923 LOC105371045A0A1W2PR82 267 aa32.42■■■□□ 2.78
VPS36-204ENST00000480923 CEP162Q5TB80 1403 aa32.42■■■□□ 2.78
VPS36-204ENST00000480923 PHLDB1Q86UU1 1377 aa32.41■■■□□ 2.78
VPS36-204ENST00000480923 NEO1Q92859 1461 aa32.39■■■□□ 2.78
VPS36-204ENST00000480923 FYCO1Q9BQS8 1478 aa32.39■■■□□ 2.78
VPS36-204ENST00000480923 CCDC18Q5T9S5 1454 aa32.38■■■□□ 2.77
VPS36-204ENST00000480923 AEBP2Q6ZN18 517 aaPredicted RBP32.38■■■□□ 2.77
VPS36-204ENST00000480923 TTC37Q6PGP7 1564 aa32.37■■■□□ 2.77
VPS36-204ENST00000480923 ARAP3Q8WWN8 1544 aa32.37■■■□□ 2.77
VPS36-204ENST00000480923 TROQ12816 1431 aaPredicted RBP32.36■■■□□ 2.77
VPS36-204ENST00000480923 LRRIQ1Q96JM4 1722 aa32.36■■■□□ 2.77
VPS36-204ENST00000480923 FANCAO15360 1455 aa32.3■■■□□ 2.76
VPS36-204ENST00000480923 KIF14Q15058 1648 aa32.29■■■□□ 2.76
VPS36-204ENST00000480923 RAPGEF3O95398 923 aa32.26■■■□□ 2.75
VPS36-204ENST00000480923 PLCH2O75038 1416 aa32.26■■■□□ 2.75
VPS36-204ENST00000480923 AKNAQ7Z591 1439 aa32.26■■■□□ 2.75
VPS36-204ENST00000480923 CFAP74Q9C0B2 1584 aa32.24■■■□□ 2.75
VPS36-204ENST00000480923 DENND4BO75064 1496 aaPredicted RBP32.19■■■□□ 2.74
VPS36-204ENST00000480923 KDM4FA0A1W2PPD8 638 aa32.17■■■□□ 2.74
VPS36-204ENST00000480923 EFCAB2Q5VUJ9 269 aa32.17■■■□□ 2.74
VPS36-204ENST00000480923 MYO5CQ9NQX4 1742 aa32.16■■■□□ 2.74
VPS36-204ENST00000480923 FRMPD1Q5SYB0 1578 aa32.13■■■□□ 2.73
VPS36-204ENST00000480923 ADGRL1O94910 1474 aa32.12■■■□□ 2.73
VPS36-204ENST00000480923 ARHGAP5Q13017 1502 aa32.11■■■□□ 2.73
VPS36-204ENST00000480923 SCAPERQ9BY12 1400 aa32.09■■■□□ 2.73
VPS36-204ENST00000480923 MTUS2Q5JR59 1369 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms