RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
CCM2-212ENST00000480382 KIAA0586Q9BVV6 1533 aa20.26■□□□□ 0.83
CCM2-212ENST00000480382 EEA1Q15075 1411 aa20.26■□□□□ 0.83
CCM2-212ENST00000480382 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
CCM2-212ENST00000480382 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
CCM2-212ENST00000480382 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
CCM2-212ENST00000480382 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
CCM2-212ENST00000480382 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
CCM2-212ENST00000480382 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
CCM2-212ENST00000480382 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
CCM2-212ENST00000480382 JPH4Q96JJ6 628 aa20.17■□□□□ 0.82
CCM2-212ENST00000480382 KIF21BO75037 1637 aa20.13■□□□□ 0.81
CCM2-212ENST00000480382 UGGT2Q9NYU1 1516 aa20.08■□□□□ 0.81
CCM2-212ENST00000480382 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
CCM2-212ENST00000480382 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
CCM2-212ENST00000480382 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.8
CCM2-212ENST00000480382 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
CCM2-212ENST00000480382 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.79
CCM2-212ENST00000480382 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
CCM2-212ENST00000480382 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
CCM2-212ENST00000480382 SAMD9Q5K651 1589 aa19.93■□□□□ 0.78
CCM2-212ENST00000480382 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
CCM2-212ENST00000480382 PTPRGP23470 1445 aa19.93■□□□□ 0.78
CCM2-212ENST00000480382 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
CCM2-212ENST00000480382 ABCC2Q92887 1545 aa19.83■□□□□ 0.77
CCM2-212ENST00000480382 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.77
CCM2-212ENST00000480382 EFCAB5A4FU69 1503 aa19.82■□□□□ 0.76
CCM2-212ENST00000480382 UACAQ9BZF9 1416 aa19.82■□□□□ 0.76
CCM2-212ENST00000480382 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
CCM2-212ENST00000480382 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
CCM2-212ENST00000480382 PLB1Q6P1J6 1458 aa19.79■□□□□ 0.76
CCM2-212ENST00000480382 ABCA8O94911 1581 aa19.79■□□□□ 0.76
CCM2-212ENST00000480382 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
CCM2-212ENST00000480382 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.76
CCM2-212ENST00000480382 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
CCM2-212ENST00000480382 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
CCM2-212ENST00000480382 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCM2-212ENST00000480382 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
CCM2-212ENST00000480382 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
CCM2-212ENST00000480382 KDM5BQ9UGL1 1544 aa19.72■□□□□ 0.75
CCM2-212ENST00000480382 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
CCM2-212ENST00000480382 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
CCM2-212ENST00000480382 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
CCM2-212ENST00000480382 ABCC10Q5T3U5 1492 aa19.65■□□□□ 0.74
CCM2-212ENST00000480382 NUP153P49790 1475 aaKnown RBP19.61■□□□□ 0.73
CCM2-212ENST00000480382 CLIP1P30622 1438 aa19.59■□□□□ 0.73
CCM2-212ENST00000480382 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
CCM2-212ENST00000480382 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
CCM2-212ENST00000480382 ATP10BO94823 1461 aa19.58■□□□□ 0.72
CCM2-212ENST00000480382 WDR7Q9Y4E6 1490 aa19.57■□□□□ 0.72
CCM2-212ENST00000480382 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
CCM2-212ENST00000480382 FAM69CQ0P6D2 419 aa19.56■□□□□ 0.72
CCM2-212ENST00000480382 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
CCM2-212ENST00000480382 GLI2P10070 1586 aa19.55■□□□□ 0.72
CCM2-212ENST00000480382 EPRSP07814 1512 aaKnown RBP19.55■□□□□ 0.72
CCM2-212ENST00000480382 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
CCM2-212ENST00000480382 CEP162Q5TB80 1403 aa19.54■□□□□ 0.72
CCM2-212ENST00000480382 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
CCM2-212ENST00000480382 LRRIQ1Q96JM4 1722 aa19.53■□□□□ 0.72
CCM2-212ENST00000480382 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
CCM2-212ENST00000480382 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
CCM2-212ENST00000480382 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
CCM2-212ENST00000480382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
CCM2-212ENST00000480382 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
CCM2-212ENST00000480382 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
CCM2-212ENST00000480382 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
CCM2-212ENST00000480382 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
CCM2-212ENST00000480382 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
CCM2-212ENST00000480382 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
CCM2-212ENST00000480382 ABCA9Q8IUA7 1624 aa19.41■□□□□ 0.7
CCM2-212ENST00000480382 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.69
CCM2-212ENST00000480382 KDM6BO15054 1643 aa19.36■□□□□ 0.69
CCM2-212ENST00000480382 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
CCM2-212ENST00000480382 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
CCM2-212ENST00000480382 PLEKHD1A6NEE1 506 aa19.35■□□□□ 0.69
CCM2-212ENST00000480382 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
CCM2-212ENST00000480382 KIF14Q15058 1648 aa19.33■□□□□ 0.69
CCM2-212ENST00000480382 MAGI3Q5TCQ9 1506 aa19.33■□□□□ 0.68
CCM2-212ENST00000480382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.68
CCM2-212ENST00000480382 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
CCM2-212ENST00000480382 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
CCM2-212ENST00000480382 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
CCM2-212ENST00000480382 MYO5CQ9NQX4 1742 aa19.26■□□□□ 0.67
CCM2-212ENST00000480382 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
CCM2-212ENST00000480382 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
CCM2-212ENST00000480382 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
CCM2-212ENST00000480382 EHBP1L1Q8N3D4 1523 aa19.2■□□□□ 0.66
CCM2-212ENST00000480382 NEO1Q92859 1461 aa19.19■□□□□ 0.66
CCM2-212ENST00000480382 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
CCM2-212ENST00000480382 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
CCM2-212ENST00000480382 FANCAO15360 1455 aa19.17■□□□□ 0.66
CCM2-212ENST00000480382 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
CCM2-212ENST00000480382 ARAP3Q8WWN8 1544 aa19.16■□□□□ 0.66
CCM2-212ENST00000480382 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
CCM2-212ENST00000480382 PLCH2O75038 1416 aa19.16■□□□□ 0.66
CCM2-212ENST00000480382 ARHGAP5Q13017 1502 aa19.14■□□□□ 0.65
CCM2-212ENST00000480382 FRMPD1Q5SYB0 1578 aa19.13■□□□□ 0.65
CCM2-212ENST00000480382 SUPT6HQ7KZ85 1726 aaKnown RBP19.12■□□□□ 0.65
CCM2-212ENST00000480382 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
CCM2-212ENST00000480382 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms