RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-204ENST00000479620 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
GRIK3-204ENST00000479620 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
GRIK3-204ENST00000479620 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
GRIK3-204ENST00000479620 EEA1Q15075 1411 aa28.5■■■□□ 2.15
GRIK3-204ENST00000479620 PRXQ9BXM0 1461 aa28.48■■■□□ 2.15
GRIK3-204ENST00000479620 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
GRIK3-204ENST00000479620 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
GRIK3-204ENST00000479620 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
GRIK3-204ENST00000479620 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
GRIK3-204ENST00000479620 FAM9AQ8IZU1 332 aaPredicted RBP28.27■■■□□ 2.12
GRIK3-204ENST00000479620 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
GRIK3-204ENST00000479620 CTTNBP2Q8WZ74 1663 aa28.23■■■□□ 2.11
GRIK3-204ENST00000479620 CARMIL2Q6F5E8 1435 aa28.22■■■□□ 2.11
GRIK3-204ENST00000479620 KIF21BO75037 1637 aa28.17■■■□□ 2.1
GRIK3-204ENST00000479620 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
GRIK3-204ENST00000479620 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
GRIK3-204ENST00000479620 PTPRGP23470 1445 aa28.1■■■□□ 2.09
GRIK3-204ENST00000479620 GOLGA3Q08378 1498 aa28.07■■■□□ 2.08
GRIK3-204ENST00000479620 KIAA0556O60303 1618 aa28.06■■■□□ 2.08
GRIK3-204ENST00000479620 ADCY10Q96PN6 1610 aa27.97■■■□□ 2.07
GRIK3-204ENST00000479620 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
GRIK3-204ENST00000479620 UHRF1BP1LA0JNW5 1464 aa27.92■■■□□ 2.06
GRIK3-204ENST00000479620 NPM1P06748 294 aaKnown RBP eCLIP27.92■■■□□ 2.06
GRIK3-204ENST00000479620 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
GRIK3-204ENST00000479620 SAMD9Q5K651 1589 aa27.91■■■□□ 2.06
GRIK3-204ENST00000479620 UBTFP17480 764 aaKnown RBP27.9■■■□□ 2.06
GRIK3-204ENST00000479620 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
GRIK3-204ENST00000479620 ABCC2Q92887 1545 aa27.86■■■□□ 2.05
GRIK3-204ENST00000479620 EHMT2Q96KQ7 1210 aa27.84■■■□□ 2.05
GRIK3-204ENST00000479620 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
GRIK3-204ENST00000479620 P3H3Q8IVL6 736 aa27.83■■■□□ 2.05
GRIK3-204ENST00000479620 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
GRIK3-204ENST00000479620 PLB1Q6P1J6 1458 aa27.79■■■□□ 2.04
GRIK3-204ENST00000479620 ABCA8O94911 1581 aa27.78■■■□□ 2.04
GRIK3-204ENST00000479620 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
GRIK3-204ENST00000479620 RANGAP1P46060 587 aaPredicted RBP27.77■■■□□ 2.04
GRIK3-204ENST00000479620 FHOD3Q2V2M9 1422 aa27.71■■■□□ 2.03
GRIK3-204ENST00000479620 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.03
GRIK3-204ENST00000479620 ZCCHC11Q5TAX3 1644 aaKnown RBP27.66■■■□□ 2.02
GRIK3-204ENST00000479620 ASXL2Q76L83 1435 aa27.66■■■□□ 2.02
GRIK3-204ENST00000479620 ARHGAP35Q9NRY4 1499 aa27.65■■■□□ 2.02
GRIK3-204ENST00000479620 KIF13AQ9H1H9 1805 aa27.65■■■□□ 2.02
GRIK3-204ENST00000479620 DIP2BQ9P265 1576 aa27.62■■■□□ 2.01
GRIK3-204ENST00000479620 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
GRIK3-204ENST00000479620 RAPGEF6Q8TEU7 1601 aa27.62■■■□□ 2.01
GRIK3-204ENST00000479620 ATP10BO94823 1461 aa27.57■■■□□ 2
GRIK3-204ENST00000479620 FMN1Q68DA7 1419 aa27.55■■■□□ 2
GRIK3-204ENST00000479620 NUP153P49790 1475 aaKnown RBP27.54■■■□□ 2
GRIK3-204ENST00000479620 GLI2P10070 1586 aa27.52■■■□□ 2
GRIK3-204ENST00000479620 WDR7Q9Y4E6 1490 aa27.52■■■□□ 2
GRIK3-204ENST00000479620 EPRSP07814 1512 aaKnown RBP27.51■■□□□ 1.99
GRIK3-204ENST00000479620 CLIP1P30622 1438 aa27.49■■□□□ 1.99
GRIK3-204ENST00000479620 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
GRIK3-204ENST00000479620 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
GRIK3-204ENST00000479620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.98
GRIK3-204ENST00000479620 HNRNPUL2Q1KMD3 747 aaKnown RBP27.39■■□□□ 1.98
GRIK3-204ENST00000479620 KCNH8Q96L42 1107 aa27.38■■□□□ 1.97
GRIK3-204ENST00000479620 HECW1Q76N89 1606 aa27.37■■□□□ 1.97
GRIK3-204ENST00000479620 MAP3K4Q9Y6R4 1608 aa27.37■■□□□ 1.97
GRIK3-204ENST00000479620 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
GRIK3-204ENST00000479620 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
GRIK3-204ENST00000479620 PLEKHD1A6NEE1 506 aa27.33■■□□□ 1.97
GRIK3-204ENST00000479620 TSPOAP1O95153 1857 aa27.33■■□□□ 1.97
GRIK3-204ENST00000479620 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
GRIK3-204ENST00000479620 PPRC1Q5VV67 1664 aaKnown RBP27.3■■□□□ 1.96
GRIK3-204ENST00000479620 CDK13Q14004 1512 aaKnown RBP27.3■■□□□ 1.96
GRIK3-204ENST00000479620 CFAP43Q8NDM7 1665 aa27.29■■□□□ 1.96
GRIK3-204ENST00000479620 CD109Q6YHK3 1445 aa27.27■■□□□ 1.96
GRIK3-204ENST00000479620 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.96
GRIK3-204ENST00000479620 FYCO1Q9BQS8 1478 aa27.26■■□□□ 1.95
GRIK3-204ENST00000479620 ABCA9Q8IUA7 1624 aa27.25■■□□□ 1.95
GRIK3-204ENST00000479620 MAGI3Q5TCQ9 1506 aa27.25■■□□□ 1.95
GRIK3-204ENST00000479620 TEX14Q8IWB6 1497 aa27.25■■□□□ 1.95
GRIK3-204ENST00000479620 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
GRIK3-204ENST00000479620 LRRIQ1Q96JM4 1722 aa27.22■■□□□ 1.95
GRIK3-204ENST00000479620 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
GRIK3-204ENST00000479620 KDM6BO15054 1643 aa27.16■■□□□ 1.94
GRIK3-204ENST00000479620 TROQ12816 1431 aaPredicted RBP27.14■■□□□ 1.93
GRIK3-204ENST00000479620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
GRIK3-204ENST00000479620 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
GRIK3-204ENST00000479620 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
GRIK3-204ENST00000479620 TTC37Q6PGP7 1564 aa27.06■■□□□ 1.92
GRIK3-204ENST00000479620 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
GRIK3-204ENST00000479620 NEO1Q92859 1461 aa27.05■■□□□ 1.92
GRIK3-204ENST00000479620 KIF14Q15058 1648 aa27.04■■□□□ 1.92
GRIK3-204ENST00000479620 ARAP3Q8WWN8 1544 aa27.02■■□□□ 1.92
GRIK3-204ENST00000479620 PLCH2O75038 1416 aa27■■□□□ 1.91
GRIK3-204ENST00000479620 FANCAO15360 1455 aa26.95■■□□□ 1.91
GRIK3-204ENST00000479620 CFAP74Q9C0B2 1584 aa26.93■■□□□ 1.9
GRIK3-204ENST00000479620 AKNAQ7Z591 1439 aa26.93■■□□□ 1.9
GRIK3-204ENST00000479620 MYO5CQ9NQX4 1742 aa26.93■■□□□ 1.9
GRIK3-204ENST00000479620 MTUS2Q5JR59 1369 aa26.91■■□□□ 1.9
GRIK3-204ENST00000479620 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
GRIK3-204ENST00000479620 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
GRIK3-204ENST00000479620 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
GRIK3-204ENST00000479620 EHBP1L1Q8N3D4 1523 aa26.86■■□□□ 1.89
GRIK3-204ENST00000479620 DENND4BO75064 1496 aaPredicted RBP26.83■■□□□ 1.89
GRIK3-204ENST00000479620 CDC42BPBQ9Y5S2 1711 aa26.83■■□□□ 1.89
GRIK3-204ENST00000479620 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
GRIK3-204ENST00000479620 ARHGAP5Q13017 1502 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms