RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
CCDC13-205ENST00000479576 POTEHQ6S545 545 aa12.48□□□□□ -0.41
CCDC13-205ENST00000479576 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC13-205ENST00000479576 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
CCDC13-205ENST00000479576 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
CCDC13-205ENST00000479576 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
CCDC13-205ENST00000479576 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
CCDC13-205ENST00000479576 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
CCDC13-205ENST00000479576 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
CCDC13-205ENST00000479576 NUBP1P53384 320 aa12.34□□□□□ -0.43
CCDC13-205ENST00000479576 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
CCDC13-205ENST00000479576 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
CCDC13-205ENST00000479576 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
CCDC13-205ENST00000479576 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
CCDC13-205ENST00000479576 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
CCDC13-205ENST00000479576 HAX1O00165 279 aa12.28□□□□□ -0.44
CCDC13-205ENST00000479576 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
CCDC13-205ENST00000479576 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
CCDC13-205ENST00000479576 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
CCDC13-205ENST00000479576 WIZO95785 1651 aa12.26□□□□□ -0.45
CCDC13-205ENST00000479576 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
CCDC13-205ENST00000479576 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
CCDC13-205ENST00000479576 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
CCDC13-205ENST00000479576 GSE1Q14687 1217 aa12.22□□□□□ -0.45
CCDC13-205ENST00000479576 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
CCDC13-205ENST00000479576 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
CCDC13-205ENST00000479576 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
CCDC13-205ENST00000479576 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
CCDC13-205ENST00000479576 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
CCDC13-205ENST00000479576 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
CCDC13-205ENST00000479576 EVX2Q03828 476 aa12.15□□□□□ -0.46
CCDC13-205ENST00000479576 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
CCDC13-205ENST00000479576 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
CCDC13-205ENST00000479576 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
CCDC13-205ENST00000479576 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
CCDC13-205ENST00000479576 PKD2Q13563 968 aa12.1□□□□□ -0.47
CCDC13-205ENST00000479576 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
CCDC13-205ENST00000479576 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
CCDC13-205ENST00000479576 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
CCDC13-205ENST00000479576 CUX2O14529 1486 aa12.08□□□□□ -0.47
CCDC13-205ENST00000479576 PYGBP11216 843 aa12.07□□□□□ -0.48
CCDC13-205ENST00000479576 MYT1Q01538 1121 aa12.05□□□□□ -0.48
CCDC13-205ENST00000479576 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
CCDC13-205ENST00000479576 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
CCDC13-205ENST00000479576 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
CCDC13-205ENST00000479576 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
CCDC13-205ENST00000479576 MAP3K13O43283 966 aa11.99□□□□□ -0.49
CCDC13-205ENST00000479576 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
CCDC13-205ENST00000479576 CLCN6P51797 869 aa11.98□□□□□ -0.49
CCDC13-205ENST00000479576 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
CCDC13-205ENST00000479576 NESP48681 1621 aa11.97□□□□□ -0.49
CCDC13-205ENST00000479576 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
CCDC13-205ENST00000479576 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
CCDC13-205ENST00000479576 GABBR2O75899 941 aa11.93□□□□□ -0.5
CCDC13-205ENST00000479576 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
CCDC13-205ENST00000479576 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
CCDC13-205ENST00000479576 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
CCDC13-205ENST00000479576 RGL2O15211 777 aa11.92□□□□□ -0.5
CCDC13-205ENST00000479576 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
CCDC13-205ENST00000479576 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
CCDC13-205ENST00000479576 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
CCDC13-205ENST00000479576 CFTRP13569 1480 aa11.91□□□□□ -0.5
CCDC13-205ENST00000479576 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
CCDC13-205ENST00000479576 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
CCDC13-205ENST00000479576 PRDM2Q13029 1718 aa11.87□□□□□ -0.51
CCDC13-205ENST00000479576 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
CCDC13-205ENST00000479576 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
CCDC13-205ENST00000479576 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
CCDC13-205ENST00000479576 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
CCDC13-205ENST00000479576 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
CCDC13-205ENST00000479576 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
CCDC13-205ENST00000479576 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
CCDC13-205ENST00000479576 PSEN1P49768 467 aa11.79□□□□□ -0.52
CCDC13-205ENST00000479576 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
CCDC13-205ENST00000479576 TIE1P35590 1138 aa11.78□□□□□ -0.52
CCDC13-205ENST00000479576 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
CCDC13-205ENST00000479576 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
CCDC13-205ENST00000479576 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
CCDC13-205ENST00000479576 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
CCDC13-205ENST00000479576 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
CCDC13-205ENST00000479576 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
CCDC13-205ENST00000479576 CEP164Q9UPV0 1460 aa11.75□□□□□ -0.53
CCDC13-205ENST00000479576 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
CCDC13-205ENST00000479576 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
CCDC13-205ENST00000479576 STK25O00506 426 aa11.71□□□□□ -0.53
CCDC13-205ENST00000479576 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
CCDC13-205ENST00000479576 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
CCDC13-205ENST00000479576 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
CCDC13-205ENST00000479576 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
CCDC13-205ENST00000479576 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
CCDC13-205ENST00000479576 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
CCDC13-205ENST00000479576 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
CCDC13-205ENST00000479576 WDR62O43379 1518 aa11.68□□□□□ -0.54
CCDC13-205ENST00000479576 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
CCDC13-205ENST00000479576 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
CCDC13-205ENST00000479576 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
CCDC13-205ENST00000479576 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
CCDC13-205ENST00000479576 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
CCDC13-205ENST00000479576 CUX1P39880 1505 aa11.61□□□□□ -0.55
CCDC13-205ENST00000479576 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms