RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
ABCF1-206ENST00000479542 KIAA0586Q9BVV6 1533 aa23.44■■□□□ 1.34
ABCF1-206ENST00000479542 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
ABCF1-206ENST00000479542 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
ABCF1-206ENST00000479542 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
ABCF1-206ENST00000479542 CUL7Q14999 1698 aa23.38■■□□□ 1.33
ABCF1-206ENST00000479542 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
ABCF1-206ENST00000479542 ABCC10Q5T3U5 1492 aa23.37■■□□□ 1.33
ABCF1-206ENST00000479542 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
ABCF1-206ENST00000479542 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
ABCF1-206ENST00000479542 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
ABCF1-206ENST00000479542 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
ABCF1-206ENST00000479542 PTPRGP23470 1445 aa23.22■■□□□ 1.31
ABCF1-206ENST00000479542 CARMIL2Q6F5E8 1435 aa23.2■■□□□ 1.3
ABCF1-206ENST00000479542 TNIKQ9UKE5 1360 aa23.19■■□□□ 1.3
ABCF1-206ENST00000479542 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
ABCF1-206ENST00000479542 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
ABCF1-206ENST00000479542 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
ABCF1-206ENST00000479542 PLB1Q6P1J6 1458 aa23.08■■□□□ 1.29
ABCF1-206ENST00000479542 UACAQ9BZF9 1416 aa23.05■■□□□ 1.28
ABCF1-206ENST00000479542 GLI2P10070 1586 aa23.05■■□□□ 1.28
ABCF1-206ENST00000479542 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
ABCF1-206ENST00000479542 KDM6BO15054 1643 aa23.04■■□□□ 1.28
ABCF1-206ENST00000479542 DISP1Q96F81 1524 aa23.04■■□□□ 1.28
ABCF1-206ENST00000479542 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
ABCF1-206ENST00000479542 ASXL2Q76L83 1435 aa23.01■■□□□ 1.27
ABCF1-206ENST00000479542 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
ABCF1-206ENST00000479542 TSPOAP1O95153 1857 aa22.95■■□□□ 1.26
ABCF1-206ENST00000479542 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
ABCF1-206ENST00000479542 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
ABCF1-206ENST00000479542 EPRSP07814 1512 aaKnown RBP22.89■■□□□ 1.26
ABCF1-206ENST00000479542 PPRC1Q5VV67 1664 aaKnown RBP22.89■■□□□ 1.25
ABCF1-206ENST00000479542 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
ABCF1-206ENST00000479542 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
ABCF1-206ENST00000479542 MAP3K4Q9Y6R4 1608 aa22.84■■□□□ 1.25
ABCF1-206ENST00000479542 TEX14Q8IWB6 1497 aa22.84■■□□□ 1.25
ABCF1-206ENST00000479542 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
ABCF1-206ENST00000479542 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
ABCF1-206ENST00000479542 WDR7Q9Y4E6 1490 aa22.79■■□□□ 1.24
ABCF1-206ENST00000479542 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
ABCF1-206ENST00000479542 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
ABCF1-206ENST00000479542 ABCA8O94911 1581 aa22.74■■□□□ 1.23
ABCF1-206ENST00000479542 MAGI3Q5TCQ9 1506 aa22.72■■□□□ 1.23
ABCF1-206ENST00000479542 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
ABCF1-206ENST00000479542 CD109Q6YHK3 1445 aa22.67■■□□□ 1.22
ABCF1-206ENST00000479542 ADGRL1O94910 1474 aa22.66■■□□□ 1.22
ABCF1-206ENST00000479542 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
ABCF1-206ENST00000479542 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
ABCF1-206ENST00000479542 KCNH8Q96L42 1107 aa22.59■■□□□ 1.21
ABCF1-206ENST00000479542 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.21
ABCF1-206ENST00000479542 ATP10BO94823 1461 aa22.56■■□□□ 1.2
ABCF1-206ENST00000479542 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
ABCF1-206ENST00000479542 EEA1Q15075 1411 aa22.52■■□□□ 1.2
ABCF1-206ENST00000479542 SAMD9Q5K651 1589 aa22.5■■□□□ 1.19
ABCF1-206ENST00000479542 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
ABCF1-206ENST00000479542 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
ABCF1-206ENST00000479542 NEO1Q92859 1461 aa22.42■■□□□ 1.18
ABCF1-206ENST00000479542 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
ABCF1-206ENST00000479542 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
ABCF1-206ENST00000479542 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
ABCF1-206ENST00000479542 ARID3CA6NKF2 412 aa22.34■■□□□ 1.17
ABCF1-206ENST00000479542 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
ABCF1-206ENST00000479542 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
ABCF1-206ENST00000479542 KIF21BO75037 1637 aa22.31■■□□□ 1.16
ABCF1-206ENST00000479542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
ABCF1-206ENST00000479542 RAPGEF3O95398 923 aa22.3■■□□□ 1.16
ABCF1-206ENST00000479542 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
ABCF1-206ENST00000479542 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
ABCF1-206ENST00000479542 FHOD3Q2V2M9 1422 aa22.27■■□□□ 1.16
ABCF1-206ENST00000479542 ADAMTSL3P82987 1691 aa22.26■■□□□ 1.15
ABCF1-206ENST00000479542 PTPRMP28827 1452 aa22.22■■□□□ 1.15
ABCF1-206ENST00000479542 FRMPD1Q5SYB0 1578 aa22.22■■□□□ 1.15
ABCF1-206ENST00000479542 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
ABCF1-206ENST00000479542 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
ABCF1-206ENST00000479542 CFAP74Q9C0B2 1584 aa22.19■■□□□ 1.14
ABCF1-206ENST00000479542 FANCAO15360 1455 aa22.18■■□□□ 1.14
ABCF1-206ENST00000479542 BCORL1Q5H9F3 1711 aa22.17■■□□□ 1.14
ABCF1-206ENST00000479542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
ABCF1-206ENST00000479542 MAGI2Q86UL8 1455 aa22.16■■□□□ 1.14
ABCF1-206ENST00000479542 RICTORQ6R327 1708 aa22.15■■□□□ 1.14
ABCF1-206ENST00000479542 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
ABCF1-206ENST00000479542 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
ABCF1-206ENST00000479542 ZMYM4Q5VZL5 1548 aa22.13■■□□□ 1.13
ABCF1-206ENST00000479542 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
ABCF1-206ENST00000479542 PLCH2O75038 1416 aa22.12■■□□□ 1.13
ABCF1-206ENST00000479542 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
ABCF1-206ENST00000479542 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
ABCF1-206ENST00000479542 CDK11AQ9UQ88 783 aaPredicted RBP22.08■■□□□ 1.13
ABCF1-206ENST00000479542 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.12
ABCF1-206ENST00000479542 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
ABCF1-206ENST00000479542 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
ABCF1-206ENST00000479542 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
ABCF1-206ENST00000479542 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
ABCF1-206ENST00000479542 ZFYVE16Q7Z3T8 1539 aa22.03■■□□□ 1.12
ABCF1-206ENST00000479542 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
ABCF1-206ENST00000479542 FBXO41Q8TF61 875 aa22.03■■□□□ 1.12
ABCF1-206ENST00000479542 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
ABCF1-206ENST00000479542 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
ABCF1-206ENST00000479542 LMTK3Q96Q04 1460 aa22.02■■□□□ 1.12
ABCF1-206ENST00000479542 HECW1Q76N89 1606 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms