RNA–Protein interactions for RNA: ENST00000479356.1

SDK2-204, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 1 (best)

Gene SDK2, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-204ENST00000479356 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
SDK2-204ENST00000479356 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
SDK2-204ENST00000479356 MIER1Q8N108 512 aa16.97■□□□□ 0.31
SDK2-204ENST00000479356 CLIP1P30622 1438 aa16.96■□□□□ 0.31
SDK2-204ENST00000479356 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
SDK2-204ENST00000479356 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
SDK2-204ENST00000479356 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
SDK2-204ENST00000479356 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
SDK2-204ENST00000479356 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
SDK2-204ENST00000479356 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
SDK2-204ENST00000479356 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
SDK2-204ENST00000479356 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
SDK2-204ENST00000479356 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
SDK2-204ENST00000479356 EEA1Q15075 1411 aa16.86■□□□□ 0.29
SDK2-204ENST00000479356 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
SDK2-204ENST00000479356 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
SDK2-204ENST00000479356 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
SDK2-204ENST00000479356 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
SDK2-204ENST00000479356 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
SDK2-204ENST00000479356 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
SDK2-204ENST00000479356 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
SDK2-204ENST00000479356 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
SDK2-204ENST00000479356 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
SDK2-204ENST00000479356 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
SDK2-204ENST00000479356 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
SDK2-204ENST00000479356 GOLGA6L6A8MZA4 724 aa16.78■□□□□ 0.28
SDK2-204ENST00000479356 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
SDK2-204ENST00000479356 NRDCO43847 1150 aa16.77■□□□□ 0.27
SDK2-204ENST00000479356 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
SDK2-204ENST00000479356 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
SDK2-204ENST00000479356 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
SDK2-204ENST00000479356 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
SDK2-204ENST00000479356 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
SDK2-204ENST00000479356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
SDK2-204ENST00000479356 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
SDK2-204ENST00000479356 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
SDK2-204ENST00000479356 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
SDK2-204ENST00000479356 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
SDK2-204ENST00000479356 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
SDK2-204ENST00000479356 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
SDK2-204ENST00000479356 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
SDK2-204ENST00000479356 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
SDK2-204ENST00000479356 HSP90AA2PQ14568 343 aaPredicted RBP16.7■□□□□ 0.26
SDK2-204ENST00000479356 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
SDK2-204ENST00000479356 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
SDK2-204ENST00000479356 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
SDK2-204ENST00000479356 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
SDK2-204ENST00000479356 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
SDK2-204ENST00000479356 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
SDK2-204ENST00000479356 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
SDK2-204ENST00000479356 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
SDK2-204ENST00000479356 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
SDK2-204ENST00000479356 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
SDK2-204ENST00000479356 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
SDK2-204ENST00000479356 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
SDK2-204ENST00000479356 ARID3AQ99856 593 aa16.58■□□□□ 0.24
SDK2-204ENST00000479356 SOGA1O94964 1423 aa16.57■□□□□ 0.24
SDK2-204ENST00000479356 PTMSP20962 102 aa16.56■□□□□ 0.24
SDK2-204ENST00000479356 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
SDK2-204ENST00000479356 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
SDK2-204ENST00000479356 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
SDK2-204ENST00000479356 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
SDK2-204ENST00000479356 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
SDK2-204ENST00000479356 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
SDK2-204ENST00000479356 RGS3P49796 1198 aa16.53■□□□□ 0.24
SDK2-204ENST00000479356 SMARCA2P51531 1590 aa16.52■□□□□ 0.23
SDK2-204ENST00000479356 CALRP27797 417 aaKnown RBP16.51■□□□□ 0.23
SDK2-204ENST00000479356 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
SDK2-204ENST00000479356 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
SDK2-204ENST00000479356 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
SDK2-204ENST00000479356 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
SDK2-204ENST00000479356 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
SDK2-204ENST00000479356 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
SDK2-204ENST00000479356 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
SDK2-204ENST00000479356 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
SDK2-204ENST00000479356 GBP4Q96PP9 640 aa16.46■□□□□ 0.23
SDK2-204ENST00000479356 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
SDK2-204ENST00000479356 CUX2O14529 1486 aa16.44■□□□□ 0.22
SDK2-204ENST00000479356 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
SDK2-204ENST00000479356 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
SDK2-204ENST00000479356 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
SDK2-204ENST00000479356 GOLGA6L1Q8N7Z2 621 aa16.43■□□□□ 0.22
SDK2-204ENST00000479356 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
SDK2-204ENST00000479356 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
SDK2-204ENST00000479356 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
SDK2-204ENST00000479356 PKNOX2Q96KN3 472 aa16.41■□□□□ 0.22
SDK2-204ENST00000479356 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
SDK2-204ENST00000479356 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
SDK2-204ENST00000479356 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
SDK2-204ENST00000479356 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
SDK2-204ENST00000479356 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
SDK2-204ENST00000479356 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
SDK2-204ENST00000479356 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
SDK2-204ENST00000479356 PODXL2Q9NZ53 605 aa16.36■□□□□ 0.21
SDK2-204ENST00000479356 MS4A1P11836 297 aa16.35■□□□□ 0.21
SDK2-204ENST00000479356 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
SDK2-204ENST00000479356 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
SDK2-204ENST00000479356 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
SDK2-204ENST00000479356 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
SDK2-204ENST00000479356 WIZO95785 1651 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms