RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
CNKSR3-204ENST00000479339 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
CNKSR3-204ENST00000479339 NUP160Q12769 1436 aa20.33■□□□□ 0.84
CNKSR3-204ENST00000479339 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
CNKSR3-204ENST00000479339 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
CNKSR3-204ENST00000479339 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
CNKSR3-204ENST00000479339 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
CNKSR3-204ENST00000479339 IGF1RP08069 1367 aa20.21■□□□□ 0.83
CNKSR3-204ENST00000479339 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
CNKSR3-204ENST00000479339 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
CNKSR3-204ENST00000479339 CUL7Q14999 1698 aa20.14■□□□□ 0.82
CNKSR3-204ENST00000479339 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.82
CNKSR3-204ENST00000479339 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
CNKSR3-204ENST00000479339 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
CNKSR3-204ENST00000479339 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
CNKSR3-204ENST00000479339 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.8
CNKSR3-204ENST00000479339 PRG4Q92954 1404 aaPredicted RBP20.07■□□□□ 0.8
CNKSR3-204ENST00000479339 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
CNKSR3-204ENST00000479339 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
CNKSR3-204ENST00000479339 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
CNKSR3-204ENST00000479339 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
CNKSR3-204ENST00000479339 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
CNKSR3-204ENST00000479339 CARMIL2Q6F5E8 1435 aa19.84■□□□□ 0.77
CNKSR3-204ENST00000479339 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
CNKSR3-204ENST00000479339 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 PTPRGP23470 1445 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
CNKSR3-204ENST00000479339 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
CNKSR3-204ENST00000479339 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
CNKSR3-204ENST00000479339 MAPKBP1O60336 1514 aa19.75■□□□□ 0.75
CNKSR3-204ENST00000479339 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
CNKSR3-204ENST00000479339 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
CNKSR3-204ENST00000479339 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
CNKSR3-204ENST00000479339 EEA1Q15075 1411 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 KIAA0556O60303 1618 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 KIF13AQ9H1H9 1805 aa19.68■□□□□ 0.74
CNKSR3-204ENST00000479339 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
CNKSR3-204ENST00000479339 ABCC2Q92887 1545 aa19.67■□□□□ 0.74
CNKSR3-204ENST00000479339 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
CNKSR3-204ENST00000479339 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
CNKSR3-204ENST00000479339 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
CNKSR3-204ENST00000479339 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
CNKSR3-204ENST00000479339 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
CNKSR3-204ENST00000479339 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
CNKSR3-204ENST00000479339 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.72
CNKSR3-204ENST00000479339 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
CNKSR3-204ENST00000479339 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
CNKSR3-204ENST00000479339 ABCA8O94911 1581 aa19.52■□□□□ 0.71
CNKSR3-204ENST00000479339 GLI2P10070 1586 aa19.51■□□□□ 0.71
CNKSR3-204ENST00000479339 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
CNKSR3-204ENST00000479339 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
CNKSR3-204ENST00000479339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
CNKSR3-204ENST00000479339 KIF21BO75037 1637 aa19.48■□□□□ 0.71
CNKSR3-204ENST00000479339 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
CNKSR3-204ENST00000479339 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
CNKSR3-204ENST00000479339 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
CNKSR3-204ENST00000479339 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
CNKSR3-204ENST00000479339 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
CNKSR3-204ENST00000479339 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
CNKSR3-204ENST00000479339 PPRC1Q5VV67 1664 aaKnown RBP19.38■□□□□ 0.69
CNKSR3-204ENST00000479339 KDM6BO15054 1643 aa19.38■□□□□ 0.69
CNKSR3-204ENST00000479339 MAP3K4Q9Y6R4 1608 aa19.37■□□□□ 0.69
CNKSR3-204ENST00000479339 ATP10BO94823 1461 aa19.35■□□□□ 0.69
CNKSR3-204ENST00000479339 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
CNKSR3-204ENST00000479339 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
CNKSR3-204ENST00000479339 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.69
CNKSR3-204ENST00000479339 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
CNKSR3-204ENST00000479339 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
CNKSR3-204ENST00000479339 TEX14Q8IWB6 1497 aa19.32■□□□□ 0.68
CNKSR3-204ENST00000479339 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
CNKSR3-204ENST00000479339 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
CNKSR3-204ENST00000479339 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
CNKSR3-204ENST00000479339 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
CNKSR3-204ENST00000479339 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
CNKSR3-204ENST00000479339 CD109Q6YHK3 1445 aa19.27■□□□□ 0.67
CNKSR3-204ENST00000479339 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.67
CNKSR3-204ENST00000479339 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
CNKSR3-204ENST00000479339 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 PRKCSHP14314 528 aaPredicted RBP19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 MIER1Q8N108 512 aa19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
CNKSR3-204ENST00000479339 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
CNKSR3-204ENST00000479339 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
CNKSR3-204ENST00000479339 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
CNKSR3-204ENST00000479339 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
CNKSR3-204ENST00000479339 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
CNKSR3-204ENST00000479339 PHLDB1Q86UU1 1377 aa19.13■□□□□ 0.65
CNKSR3-204ENST00000479339 ARAP3Q8WWN8 1544 aa19.11■□□□□ 0.65
CNKSR3-204ENST00000479339 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 HECW1Q76N89 1606 aa19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 NEO1Q92859 1461 aa19.08■□□□□ 0.65
CNKSR3-204ENST00000479339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
CNKSR3-204ENST00000479339 ATP1B4Q9UN42 357 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms