RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
CNKSR3-204ENST00000479339 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
CNKSR3-204ENST00000479339 NUP160Q12769 1436 aa20.33■□□□□ 0.84
CNKSR3-204ENST00000479339 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
CNKSR3-204ENST00000479339 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
CNKSR3-204ENST00000479339 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
CNKSR3-204ENST00000479339 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
CNKSR3-204ENST00000479339 IGF1RP08069 1367 aa20.21■□□□□ 0.83
CNKSR3-204ENST00000479339 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
CNKSR3-204ENST00000479339 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
CNKSR3-204ENST00000479339 CUL7Q14999 1698 aa20.14■□□□□ 0.82
CNKSR3-204ENST00000479339 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.82
CNKSR3-204ENST00000479339 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
CNKSR3-204ENST00000479339 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
CNKSR3-204ENST00000479339 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
CNKSR3-204ENST00000479339 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.8
CNKSR3-204ENST00000479339 PRG4Q92954 1404 aaPredicted RBP20.07■□□□□ 0.8
CNKSR3-204ENST00000479339 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
CNKSR3-204ENST00000479339 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
CNKSR3-204ENST00000479339 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
CNKSR3-204ENST00000479339 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
CNKSR3-204ENST00000479339 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
CNKSR3-204ENST00000479339 CARMIL2Q6F5E8 1435 aa19.84■□□□□ 0.77
CNKSR3-204ENST00000479339 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
CNKSR3-204ENST00000479339 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 PTPRGP23470 1445 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
CNKSR3-204ENST00000479339 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
CNKSR3-204ENST00000479339 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
CNKSR3-204ENST00000479339 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
CNKSR3-204ENST00000479339 MAPKBP1O60336 1514 aa19.75■□□□□ 0.75
CNKSR3-204ENST00000479339 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
CNKSR3-204ENST00000479339 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
CNKSR3-204ENST00000479339 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
CNKSR3-204ENST00000479339 EEA1Q15075 1411 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 KIAA0556O60303 1618 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
CNKSR3-204ENST00000479339 KIF13AQ9H1H9 1805 aa19.68■□□□□ 0.74
CNKSR3-204ENST00000479339 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
CNKSR3-204ENST00000479339 ABCC2Q92887 1545 aa19.67■□□□□ 0.74
CNKSR3-204ENST00000479339 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
CNKSR3-204ENST00000479339 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
CNKSR3-204ENST00000479339 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
CNKSR3-204ENST00000479339 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
CNKSR3-204ENST00000479339 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
CNKSR3-204ENST00000479339 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
CNKSR3-204ENST00000479339 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.72
CNKSR3-204ENST00000479339 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
CNKSR3-204ENST00000479339 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
CNKSR3-204ENST00000479339 ABCA8O94911 1581 aa19.52■□□□□ 0.71
CNKSR3-204ENST00000479339 GLI2P10070 1586 aa19.51■□□□□ 0.71
CNKSR3-204ENST00000479339 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
CNKSR3-204ENST00000479339 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
CNKSR3-204ENST00000479339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
CNKSR3-204ENST00000479339 KIF21BO75037 1637 aa19.48■□□□□ 0.71
CNKSR3-204ENST00000479339 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
CNKSR3-204ENST00000479339 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
CNKSR3-204ENST00000479339 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
CNKSR3-204ENST00000479339 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
CNKSR3-204ENST00000479339 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
CNKSR3-204ENST00000479339 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
CNKSR3-204ENST00000479339 PPRC1Q5VV67 1664 aaKnown RBP19.38■□□□□ 0.69
CNKSR3-204ENST00000479339 KDM6BO15054 1643 aa19.38■□□□□ 0.69
CNKSR3-204ENST00000479339 MAP3K4Q9Y6R4 1608 aa19.37■□□□□ 0.69
CNKSR3-204ENST00000479339 ATP10BO94823 1461 aa19.35■□□□□ 0.69
CNKSR3-204ENST00000479339 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
CNKSR3-204ENST00000479339 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
CNKSR3-204ENST00000479339 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.69
CNKSR3-204ENST00000479339 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
CNKSR3-204ENST00000479339 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
CNKSR3-204ENST00000479339 TEX14Q8IWB6 1497 aa19.32■□□□□ 0.68
CNKSR3-204ENST00000479339 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
CNKSR3-204ENST00000479339 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
CNKSR3-204ENST00000479339 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
CNKSR3-204ENST00000479339 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
CNKSR3-204ENST00000479339 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
CNKSR3-204ENST00000479339 CD109Q6YHK3 1445 aa19.27■□□□□ 0.67
CNKSR3-204ENST00000479339 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.67
CNKSR3-204ENST00000479339 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
CNKSR3-204ENST00000479339 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
CNKSR3-204ENST00000479339 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 PRKCSHP14314 528 aaPredicted RBP19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 MIER1Q8N108 512 aa19.22■□□□□ 0.67
CNKSR3-204ENST00000479339 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
CNKSR3-204ENST00000479339 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
CNKSR3-204ENST00000479339 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
CNKSR3-204ENST00000479339 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
CNKSR3-204ENST00000479339 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
CNKSR3-204ENST00000479339 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
CNKSR3-204ENST00000479339 PHLDB1Q86UU1 1377 aa19.13■□□□□ 0.65
CNKSR3-204ENST00000479339 ARAP3Q8WWN8 1544 aa19.11■□□□□ 0.65
CNKSR3-204ENST00000479339 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 HECW1Q76N89 1606 aa19.09■□□□□ 0.65
CNKSR3-204ENST00000479339 NEO1Q92859 1461 aa19.08■□□□□ 0.65
CNKSR3-204ENST00000479339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
CNKSR3-204ENST00000479339 ATP1B4Q9UN42 357 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms