RNA–Protein interactions for RNA: ENST00000478640.6

CCT3-212, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 583 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-212ENST00000478640 IGF1RP08069 1367 aa19.41■□□□□ 0.7
CCT3-212ENST00000478640 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.69
CCT3-212ENST00000478640 ERCC6L2Q5T890 1561 aa19.38■□□□□ 0.69
CCT3-212ENST00000478640 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
CCT3-212ENST00000478640 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCT3-212ENST00000478640 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
CCT3-212ENST00000478640 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
CCT3-212ENST00000478640 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
CCT3-212ENST00000478640 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
CCT3-212ENST00000478640 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
CCT3-212ENST00000478640 PTPRGP23470 1445 aa19.14■□□□□ 0.65
CCT3-212ENST00000478640 CUL7Q14999 1698 aa19.13■□□□□ 0.65
CCT3-212ENST00000478640 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
CCT3-212ENST00000478640 RAPGEF2Q9Y4G8 1499 aa19.07■□□□□ 0.64
CCT3-212ENST00000478640 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
CCT3-212ENST00000478640 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
CCT3-212ENST00000478640 IQGAP2Q13576 1575 aa18.98■□□□□ 0.63
CCT3-212ENST00000478640 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
CCT3-212ENST00000478640 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
CCT3-212ENST00000478640 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
CCT3-212ENST00000478640 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
CCT3-212ENST00000478640 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
CCT3-212ENST00000478640 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
CCT3-212ENST00000478640 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
CCT3-212ENST00000478640 MAPKBP1O60336 1514 aa18.9■□□□□ 0.62
CCT3-212ENST00000478640 ARID3CA6NKF2 412 aa18.88■□□□□ 0.61
CCT3-212ENST00000478640 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
CCT3-212ENST00000478640 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
CCT3-212ENST00000478640 ABCC2Q92887 1545 aa18.88■□□□□ 0.61
CCT3-212ENST00000478640 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
CCT3-212ENST00000478640 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
CCT3-212ENST00000478640 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
CCT3-212ENST00000478640 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.6
CCT3-212ENST00000478640 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
CCT3-212ENST00000478640 UHRF1BP1LA0JNW5 1464 aa18.82■□□□□ 0.6
CCT3-212ENST00000478640 DIP2BQ9P265 1576 aa18.81■□□□□ 0.6
CCT3-212ENST00000478640 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
CCT3-212ENST00000478640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
CCT3-212ENST00000478640 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
CCT3-212ENST00000478640 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
CCT3-212ENST00000478640 KDM5BQ9UGL1 1544 aa18.74■□□□□ 0.59
CCT3-212ENST00000478640 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
CCT3-212ENST00000478640 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
CCT3-212ENST00000478640 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
CCT3-212ENST00000478640 EEA1Q15075 1411 aa18.69■□□□□ 0.58
CCT3-212ENST00000478640 KDM6BO15054 1643 aa18.68■□□□□ 0.58
CCT3-212ENST00000478640 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
CCT3-212ENST00000478640 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
CCT3-212ENST00000478640 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
CCT3-212ENST00000478640 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
CCT3-212ENST00000478640 GLI2P10070 1586 aa18.64■□□□□ 0.57
CCT3-212ENST00000478640 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
CCT3-212ENST00000478640 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
CCT3-212ENST00000478640 ABCA8O94911 1581 aa18.6■□□□□ 0.57
CCT3-212ENST00000478640 TEX14Q8IWB6 1497 aa18.6■□□□□ 0.57
CCT3-212ENST00000478640 ATP10BO94823 1461 aa18.58■□□□□ 0.57
CCT3-212ENST00000478640 COL17A1Q9UMD9 1497 aaPredicted RBP18.58■□□□□ 0.56
CCT3-212ENST00000478640 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
CCT3-212ENST00000478640 PLEKHD1A6NEE1 506 aa18.57■□□□□ 0.56
CCT3-212ENST00000478640 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
CCT3-212ENST00000478640 MAP3K4Q9Y6R4 1608 aa18.52■□□□□ 0.55
CCT3-212ENST00000478640 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
CCT3-212ENST00000478640 SAMD9Q5K651 1589 aa18.48■□□□□ 0.55
CCT3-212ENST00000478640 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
CCT3-212ENST00000478640 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
CCT3-212ENST00000478640 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
CCT3-212ENST00000478640 RAPGEF6Q8TEU7 1601 aa18.44■□□□□ 0.54
CCT3-212ENST00000478640 KIF21BO75037 1637 aa18.43■□□□□ 0.54
CCT3-212ENST00000478640 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
CCT3-212ENST00000478640 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
CCT3-212ENST00000478640 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
CCT3-212ENST00000478640 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
CCT3-212ENST00000478640 FOXD1Q16676 465 aa18.37■□□□□ 0.53
CCT3-212ENST00000478640 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
CCT3-212ENST00000478640 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
CCT3-212ENST00000478640 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
CCT3-212ENST00000478640 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.52
CCT3-212ENST00000478640 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
CCT3-212ENST00000478640 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
CCT3-212ENST00000478640 ABCA9Q8IUA7 1624 aa18.3■□□□□ 0.52
CCT3-212ENST00000478640 NEO1Q92859 1461 aa18.29■□□□□ 0.52
CCT3-212ENST00000478640 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CCT3-212ENST00000478640 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
CCT3-212ENST00000478640 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
CCT3-212ENST00000478640 FANCAO15360 1455 aa18.26■□□□□ 0.51
CCT3-212ENST00000478640 DENND4BO75064 1496 aaPredicted RBP18.24■□□□□ 0.51
CCT3-212ENST00000478640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCT3-212ENST00000478640 MLECQ14165 292 aa18.22■□□□□ 0.51
CCT3-212ENST00000478640 PLCH2O75038 1416 aa18.2■□□□□ 0.5
CCT3-212ENST00000478640 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
CCT3-212ENST00000478640 CLIP1P30622 1438 aa18.18■□□□□ 0.5
CCT3-212ENST00000478640 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
CCT3-212ENST00000478640 AFAP1Q8N556 730 aa18.16■□□□□ 0.5
CCT3-212ENST00000478640 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
CCT3-212ENST00000478640 TTC37Q6PGP7 1564 aa18.16■□□□□ 0.5
CCT3-212ENST00000478640 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
CCT3-212ENST00000478640 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
CCT3-212ENST00000478640 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
CCT3-212ENST00000478640 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
CCT3-212ENST00000478640 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms