RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
PCCB-214ENST00000478469 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
PCCB-214ENST00000478469 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
PCCB-214ENST00000478469 FMN1Q68DA7 1419 aa17.08■□□□□ 0.33
PCCB-214ENST00000478469 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
PCCB-214ENST00000478469 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
PCCB-214ENST00000478469 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
PCCB-214ENST00000478469 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
PCCB-214ENST00000478469 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
PCCB-214ENST00000478469 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■■□ 22.2
PCCB-214ENST00000478469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCCB-214ENST00000478469 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
PCCB-214ENST00000478469 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
PCCB-214ENST00000478469 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
PCCB-214ENST00000478469 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.31
PCCB-214ENST00000478469 CUX1P39880 1505 aa17.01■□□□□ 0.31
PCCB-214ENST00000478469 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
PCCB-214ENST00000478469 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
PCCB-214ENST00000478469 KANK4Q5T7N3 995 aaPredicted RBP16.99■□□□□ 0.31
PCCB-214ENST00000478469 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
PCCB-214ENST00000478469 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
PCCB-214ENST00000478469 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PCCB-214ENST00000478469 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
PCCB-214ENST00000478469 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
PCCB-214ENST00000478469 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
PCCB-214ENST00000478469 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
PCCB-214ENST00000478469 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
PCCB-214ENST00000478469 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
PCCB-214ENST00000478469 BCANQ96GW7 911 aa16.92■□□□□ 0.3
PCCB-214ENST00000478469 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
PCCB-214ENST00000478469 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
PCCB-214ENST00000478469 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
PCCB-214ENST00000478469 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
PCCB-214ENST00000478469 PTPRGP23470 1445 aa16.88■□□□□ 0.29
PCCB-214ENST00000478469 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
PCCB-214ENST00000478469 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
PCCB-214ENST00000478469 NEFLP07196 543 aa16.84■□□□□ 0.29
PCCB-214ENST00000478469 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
PCCB-214ENST00000478469 PRXQ9BXM0 1461 aa16.82■□□□□ 0.28
PCCB-214ENST00000478469 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
PCCB-214ENST00000478469 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
PCCB-214ENST00000478469 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
PCCB-214ENST00000478469 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PCCB-214ENST00000478469 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
PCCB-214ENST00000478469 ANP32CO43423 234 aa16.77■□□□□ 0.28
PCCB-214ENST00000478469 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
PCCB-214ENST00000478469 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
PCCB-214ENST00000478469 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
PCCB-214ENST00000478469 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
PCCB-214ENST00000478469 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
PCCB-214ENST00000478469 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
PCCB-214ENST00000478469 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
PCCB-214ENST00000478469 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
PCCB-214ENST00000478469 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.261e-7■■■□□ 18.3
PCCB-214ENST00000478469 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
PCCB-214ENST00000478469 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
PCCB-214ENST00000478469 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
PCCB-214ENST00000478469 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
PCCB-214ENST00000478469 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
PCCB-214ENST00000478469 ANKRD30AQ9BXX3 1397 aa16.63■□□□□ 0.25
PCCB-214ENST00000478469 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
PCCB-214ENST00000478469 KANK1Q14678 1352 aa16.6■□□□□ 0.25
PCCB-214ENST00000478469 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
PCCB-214ENST00000478469 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
PCCB-214ENST00000478469 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCCB-214ENST00000478469 GGT6Q6P531 493 aa16.6■□□□□ 0.25
PCCB-214ENST00000478469 EFCAB5A4FU69 1503 aa16.59■□□□□ 0.25
PCCB-214ENST00000478469 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
PCCB-214ENST00000478469 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
PCCB-214ENST00000478469 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
PCCB-214ENST00000478469 SYNJ2O15056 1496 aa16.58■□□□□ 0.25
PCCB-214ENST00000478469 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
PCCB-214ENST00000478469 MLECQ14165 292 aa16.57■□□□□ 0.24
PCCB-214ENST00000478469 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
PCCB-214ENST00000478469 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
PCCB-214ENST00000478469 CUL7Q14999 1698 aa16.55■□□□□ 0.24
PCCB-214ENST00000478469 PKD2Q13563 968 aa16.55■□□□□ 0.24
PCCB-214ENST00000478469 NUP155O75694 1391 aa16.54■□□□□ 0.24
PCCB-214ENST00000478469 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
PCCB-214ENST00000478469 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
PCCB-214ENST00000478469 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
PCCB-214ENST00000478469 KIF3BO15066 747 aa16.53■□□□□ 0.24
PCCB-214ENST00000478469 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
PCCB-214ENST00000478469 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.23
PCCB-214ENST00000478469 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
PCCB-214ENST00000478469 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
PCCB-214ENST00000478469 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
PCCB-214ENST00000478469 FOXD1Q16676 465 aa16.49■□□□□ 0.23
PCCB-214ENST00000478469 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
PCCB-214ENST00000478469 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
PCCB-214ENST00000478469 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
PCCB-214ENST00000478469 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
PCCB-214ENST00000478469 FAM69CQ0P6D2 419 aa16.47■□□□□ 0.23
PCCB-214ENST00000478469 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
PCCB-214ENST00000478469 ZNF644Q9H582 1327 aaPredicted RBP16.46■□□□□ 0.23
PCCB-214ENST00000478469 NCOA2Q15596 1464 aa16.45■□□□□ 0.22
PCCB-214ENST00000478469 NEFMP07197 916 aa16.43■□□□□ 0.22
PCCB-214ENST00000478469 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
PCCB-214ENST00000478469 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
PCCB-214ENST00000478469 UACAQ9BZF9 1416 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms