RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 EEA1Q15075 1411 aa15.72■□□□□ 0.11
GFM1-207ENST00000478254 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
GFM1-207ENST00000478254 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
GFM1-207ENST00000478254 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
GFM1-207ENST00000478254 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
GFM1-207ENST00000478254 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
GFM1-207ENST00000478254 ANP32AP39687 249 aaKnown RBP15.7■□□□□ 0.1
GFM1-207ENST00000478254 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
GFM1-207ENST00000478254 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
GFM1-207ENST00000478254 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
GFM1-207ENST00000478254 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
GFM1-207ENST00000478254 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
GFM1-207ENST00000478254 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
GFM1-207ENST00000478254 CCER2I3L3R5 266 aa15.64■□□□□ 0.09
GFM1-207ENST00000478254 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
GFM1-207ENST00000478254 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
GFM1-207ENST00000478254 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
GFM1-207ENST00000478254 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
GFM1-207ENST00000478254 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
GFM1-207ENST00000478254 NEFMP07197 916 aa15.54■□□□□ 0.08
GFM1-207ENST00000478254 KIF21BO75037 1637 aa15.54■□□□□ 0.08
GFM1-207ENST00000478254 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
GFM1-207ENST00000478254 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
GFM1-207ENST00000478254 SETD5Q9C0A6 1442 aa15.5■□□□□ 0.07
GFM1-207ENST00000478254 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
GFM1-207ENST00000478254 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
GFM1-207ENST00000478254 ARID3CA6NKF2 412 aa15.47■□□□□ 0.07
GFM1-207ENST00000478254 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
GFM1-207ENST00000478254 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
GFM1-207ENST00000478254 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
GFM1-207ENST00000478254 ARXQ96QS3 562 aa15.44■□□□□ 0.06
GFM1-207ENST00000478254 RRP7BPQ9NSQ0 103 aa15.44■□□□□ 0.06
GFM1-207ENST00000478254 FOXD1Q16676 465 aa15.43■□□□□ 0.06
GFM1-207ENST00000478254 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
GFM1-207ENST00000478254 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
GFM1-207ENST00000478254 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
GFM1-207ENST00000478254 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
GFM1-207ENST00000478254 NACADO15069 1562 aa15.39■□□□□ 0.05
GFM1-207ENST00000478254 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
GFM1-207ENST00000478254 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
GFM1-207ENST00000478254 WASHC2AQ641Q2 1341 aa15.36■□□□□ 0.05
GFM1-207ENST00000478254 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
GFM1-207ENST00000478254 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
GFM1-207ENST00000478254 TIMELESSQ9UNS1 1208 aa15.35■□□□□ 0.05
GFM1-207ENST00000478254 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
GFM1-207ENST00000478254 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
GFM1-207ENST00000478254 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.04
GFM1-207ENST00000478254 PRKRIP1Q9H875 184 aaPredicted RBP15.31■□□□□ 0.04
GFM1-207ENST00000478254 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
GFM1-207ENST00000478254 ERICH6BQ5W0A0 696 aa15.3■□□□□ 0.04
GFM1-207ENST00000478254 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
GFM1-207ENST00000478254 SMARCA4P51532 1647 aa15.27■□□□□ 0.03
GFM1-207ENST00000478254 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
GFM1-207ENST00000478254 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
GFM1-207ENST00000478254 PDE4AP27815 886 aa15.23■□□□□ 0.03
GFM1-207ENST00000478254 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
GFM1-207ENST00000478254 PLIN1O60240 522 aa15.22■□□□□ 0.03
GFM1-207ENST00000478254 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
GFM1-207ENST00000478254 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
GFM1-207ENST00000478254 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
GFM1-207ENST00000478254 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
GFM1-207ENST00000478254 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
GFM1-207ENST00000478254 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
GFM1-207ENST00000478254 RGS3P49796 1198 aa15.15■□□□□ 0.02
GFM1-207ENST00000478254 GSE1Q14687 1217 aa15.15■□□□□ 0.02
GFM1-207ENST00000478254 ARID4BQ4LE39 1312 aaPredicted RBP15.15■□□□□ 0.02
GFM1-207ENST00000478254 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
GFM1-207ENST00000478254 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
GFM1-207ENST00000478254 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
GFM1-207ENST00000478254 KIF7Q2M1P5 1343 aa15.09■□□□□ 0.01
GFM1-207ENST00000478254 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
GFM1-207ENST00000478254 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
GFM1-207ENST00000478254 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
GFM1-207ENST00000478254 CUX2O14529 1486 aa15.09■□□□□ 0.01
GFM1-207ENST00000478254 PRXQ9BXM0 1461 aa15.08■□□□□ 0.01
GFM1-207ENST00000478254 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0.01
GFM1-207ENST00000478254 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0
GFM1-207ENST00000478254 CCDC7Q96M83 1385 aa15.08■□□□□ 0
GFM1-207ENST00000478254 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
GFM1-207ENST00000478254 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
GFM1-207ENST00000478254 MPHOSPH9Q99550 1183 aa15.07■□□□□ 0
GFM1-207ENST00000478254 FRAT2O75474 233 aaPredicted RBP15.06■□□□□ 0
GFM1-207ENST00000478254 CARMIL1Q5VZK9 1371 aa15.05■□□□□ 0
GFM1-207ENST00000478254 RRP1P56182 461 aaKnown RBP15.05■□□□□ 0
GFM1-207ENST00000478254 UBE2Q2Q8WVN8 375 aa15.05■□□□□ 0
GFM1-207ENST00000478254 CDCA7LQ96GN5 454 aa15.05■□□□□ 0
GFM1-207ENST00000478254 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
GFM1-207ENST00000478254 DDRGK1Q96HY6 314 aa15.05■□□□□ -0
GFM1-207ENST00000478254 NAP1L5Q96NT1 182 aaPredicted RBP15.04■□□□□ -0
GFM1-207ENST00000478254 BACH2Q9BYV9 841 aa15.04■□□□□ -0
GFM1-207ENST00000478254 SLKQ9H2G2 1235 aaPredicted RBP15.04■□□□□ -0
GFM1-207ENST00000478254 USP35Q9P2H5 1018 aa15.04■□□□□ -0
GFM1-207ENST00000478254 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
GFM1-207ENST00000478254 CRBNQ96SW2 442 aa15.02□□□□□ -0.01
GFM1-207ENST00000478254 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
GFM1-207ENST00000478254 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
GFM1-207ENST00000478254 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
GFM1-207ENST00000478254 CC2D1BQ5T0F9 858 aaKnown RBP15□□□□□ -0.01
GFM1-207ENST00000478254 AQRO60306 1485 aaKnown RBP eCLIP14.99□□□□□ -0.01
GFM1-207ENST00000478254 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms