RNA–Protein interactions for RNA: ENST00000477613.6

RPL13A-208, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-208ENST00000477613 KIAA0586Q9BVV6 1533 aa29.86■■■□□ 2.37
RPL13A-208ENST00000477613 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
RPL13A-208ENST00000477613 PRG4Q92954 1404 aaPredicted RBP29.84■■■□□ 2.37
RPL13A-208ENST00000477613 RAPGEF2Q9Y4G8 1499 aa29.74■■■□□ 2.35
RPL13A-208ENST00000477613 IQGAP2Q13576 1575 aa29.67■■■□□ 2.34
RPL13A-208ENST00000477613 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
RPL13A-208ENST00000477613 PRXQ9BXM0 1461 aa29.57■■■□□ 2.32
RPL13A-208ENST00000477613 CARMIL2Q6F5E8 1435 aa29.54■■■□□ 2.32
RPL13A-208ENST00000477613 EEA1Q15075 1411 aa29.5■■■□□ 2.31
RPL13A-208ENST00000477613 UGGT2Q9NYU1 1516 aa29.5■■■□□ 2.31
RPL13A-208ENST00000477613 CTTNBP2Q8WZ74 1663 aa29.5■■■□□ 2.31
RPL13A-208ENST00000477613 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
RPL13A-208ENST00000477613 DISP1Q96F81 1524 aa29.45■■■□□ 2.31
RPL13A-208ENST00000477613 ADCY10Q96PN6 1610 aa29.45■■■□□ 2.3
RPL13A-208ENST00000477613 PTPRGP23470 1445 aa29.45■■■□□ 2.3
RPL13A-208ENST00000477613 CSRNP3Q8WYN3 585 aa29.44■■■□□ 2.3
RPL13A-208ENST00000477613 KIAA0556O60303 1618 aa29.38■■■□□ 2.29
RPL13A-208ENST00000477613 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
RPL13A-208ENST00000477613 NPM1P06748 294 aaKnown RBP eCLIP29.36■■■□□ 2.29
RPL13A-208ENST00000477613 MAPKBP1O60336 1514 aa29.33■■■□□ 2.29
RPL13A-208ENST00000477613 TTBK1Q5TCY1 1321 aaPredicted RBP29.32■■■□□ 2.28
RPL13A-208ENST00000477613 GOLGA3Q08378 1498 aa29.31■■■□□ 2.28
RPL13A-208ENST00000477613 UHRF1BP1LA0JNW5 1464 aa29.27■■■□□ 2.28
RPL13A-208ENST00000477613 UACAQ9BZF9 1416 aa29.26■■■□□ 2.27
RPL13A-208ENST00000477613 ABCC2Q92887 1545 aa29.25■■■□□ 2.27
RPL13A-208ENST00000477613 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
RPL13A-208ENST00000477613 FAM9AQ8IZU1 332 aaPredicted RBP29.24■■■□□ 2.27
RPL13A-208ENST00000477613 KIF21BO75037 1637 aa29.21■■■□□ 2.27
RPL13A-208ENST00000477613 ABCC10Q5T3U5 1492 aa29.21■■■□□ 2.27
RPL13A-208ENST00000477613 DIP2BQ9P265 1576 aa29.17■■■□□ 2.26
RPL13A-208ENST00000477613 KDM5BQ9UGL1 1544 aa29.12■■■□□ 2.25
RPL13A-208ENST00000477613 FAM69CQ0P6D2 419 aa29.11■■■□□ 2.25
RPL13A-208ENST00000477613 SAMD9Q5K651 1589 aa29.1■■■□□ 2.25
RPL13A-208ENST00000477613 PLB1Q6P1J6 1458 aa29.09■■■□□ 2.25
RPL13A-208ENST00000477613 ABCA8O94911 1581 aa29.07■■■□□ 2.24
RPL13A-208ENST00000477613 ASXL2Q76L83 1435 aa29.07■■■□□ 2.24
RPL13A-208ENST00000477613 ZCCHC11Q5TAX3 1644 aaKnown RBP29.06■■■□□ 2.24
RPL13A-208ENST00000477613 P3H3Q8IVL6 736 aa29■■■□□ 2.23
RPL13A-208ENST00000477613 GLI2P10070 1586 aa28.96■■■□□ 2.23
RPL13A-208ENST00000477613 EFCAB5A4FU69 1503 aa28.94■■■□□ 2.22
RPL13A-208ENST00000477613 EPRSP07814 1512 aaKnown RBP28.91■■■□□ 2.22
RPL13A-208ENST00000477613 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
RPL13A-208ENST00000477613 WDR7Q9Y4E6 1490 aa28.91■■■□□ 2.22
RPL13A-208ENST00000477613 FHOD3Q2V2M9 1422 aa28.89■■■□□ 2.22
RPL13A-208ENST00000477613 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.22
RPL13A-208ENST00000477613 TSPOAP1O95153 1857 aa28.89■■■□□ 2.21
RPL13A-208ENST00000477613 RAPGEF6Q8TEU7 1601 aa28.87■■■□□ 2.21
RPL13A-208ENST00000477613 EHMT2Q96KQ7 1210 aa28.87■■■□□ 2.21
RPL13A-208ENST00000477613 MAP3K4Q9Y6R4 1608 aa28.82■■■□□ 2.2
RPL13A-208ENST00000477613 ATP10BO94823 1461 aa28.8■■■□□ 2.2
RPL13A-208ENST00000477613 PPRC1Q5VV67 1664 aaKnown RBP28.8■■■□□ 2.2
RPL13A-208ENST00000477613 KDM6BO15054 1643 aa28.76■■■□□ 2.2
RPL13A-208ENST00000477613 NUP153P49790 1475 aaKnown RBP28.75■■■□□ 2.19
RPL13A-208ENST00000477613 ARID3CA6NKF2 412 aa28.74■■■□□ 2.19
RPL13A-208ENST00000477613 ARHGAP35Q9NRY4 1499 aa28.72■■■□□ 2.19
RPL13A-208ENST00000477613 TEX14Q8IWB6 1497 aa28.71■■■□□ 2.19
RPL13A-208ENST00000477613 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.19
RPL13A-208ENST00000477613 KCNH8Q96L42 1107 aa28.68■■■□□ 2.18
RPL13A-208ENST00000477613 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
RPL13A-208ENST00000477613 CD109Q6YHK3 1445 aa28.64■■■□□ 2.18
RPL13A-208ENST00000477613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.63■■■□□ 2.17
RPL13A-208ENST00000477613 HNRNPUL2Q1KMD3 747 aaKnown RBP28.63■■■□□ 2.17
RPL13A-208ENST00000477613 MAGI3Q5TCQ9 1506 aa28.63■■■□□ 2.17
RPL13A-208ENST00000477613 ABCA9Q8IUA7 1624 aa28.58■■■□□ 2.17
RPL13A-208ENST00000477613 HECW1Q76N89 1606 aa28.57■■■□□ 2.16
RPL13A-208ENST00000477613 CDK13Q14004 1512 aaKnown RBP28.52■■■□□ 2.16
RPL13A-208ENST00000477613 COL17A1Q9UMD9 1497 aaPredicted RBP28.52■■■□□ 2.16
RPL13A-208ENST00000477613 PLEKHD1A6NEE1 506 aa28.51■■■□□ 2.15
RPL13A-208ENST00000477613 CLIP1P30622 1438 aa28.46■■■□□ 2.15
RPL13A-208ENST00000477613 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
RPL13A-208ENST00000477613 PCF11O94913 1555 aaKnown RBP28.41■■■□□ 2.14
RPL13A-208ENST00000477613 PHLDB1Q86UU1 1377 aa28.39■■■□□ 2.14
RPL13A-208ENST00000477613 CASKIN1Q8WXD9 1431 aa28.39■■■□□ 2.14
RPL13A-208ENST00000477613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.38■■■□□ 2.131e-44■□□□□ 9.7
RPL13A-208ENST00000477613 ARAP3Q8WWN8 1544 aa28.38■■■□□ 2.13
RPL13A-208ENST00000477613 NEO1Q92859 1461 aa28.38■■■□□ 2.13
RPL13A-208ENST00000477613 LRRIQ1Q96JM4 1722 aa28.36■■■□□ 2.13
RPL13A-208ENST00000477613 CDK11AQ9UQ88 783 aaPredicted RBP28.36■■■□□ 2.13
RPL13A-208ENST00000477613 TTC37Q6PGP7 1564 aa28.36■■■□□ 2.13
RPL13A-208ENST00000477613 CCDC18Q5T9S5 1454 aa28.34■■■□□ 2.13
RPL13A-208ENST00000477613 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
RPL13A-208ENST00000477613 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
RPL13A-208ENST00000477613 CFAP74Q9C0B2 1584 aa28.29■■■□□ 2.12
RPL13A-208ENST00000477613 TROQ12816 1431 aaPredicted RBP28.29■■■□□ 2.12
RPL13A-208ENST00000477613 KIF14Q15058 1648 aa28.28■■■□□ 2.12
RPL13A-208ENST00000477613 CEP162Q5TB80 1403 aa28.26■■■□□ 2.12
RPL13A-208ENST00000477613 FANCAO15360 1455 aa28.26■■■□□ 2.11
RPL13A-208ENST00000477613 PLCH2O75038 1416 aa28.21■■■□□ 2.11
RPL13A-208ENST00000477613 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
RPL13A-208ENST00000477613 MYO5CQ9NQX4 1742 aa28.21■■■□□ 2.11
RPL13A-208ENST00000477613 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
RPL13A-208ENST00000477613 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
RPL13A-208ENST00000477613 DENND4BO75064 1496 aaPredicted RBP28.16■■■□□ 2.1
RPL13A-208ENST00000477613 RAPGEF3O95398 923 aa28.16■■■□□ 2.1
RPL13A-208ENST00000477613 ADGRL1O94910 1474 aa28.14■■■□□ 2.09
RPL13A-208ENST00000477613 RICTORQ6R327 1708 aa28.13■■■□□ 2.09
RPL13A-208ENST00000477613 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
RPL13A-208ENST00000477613 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
RPL13A-208ENST00000477613 ARHGAP5Q13017 1502 aa28.08■■■□□ 2.08
RPL13A-208ENST00000477613 ZMYM4Q5VZL5 1548 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms