RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 IGF1RP08069 1367 aa19.91■□□□□ 0.78
HDLBP-236ENST00000477477 CUL7Q14999 1698 aa19.86■□□□□ 0.77
HDLBP-236ENST00000477477 KIAA0586Q9BVV6 1533 aa19.84■□□□□ 0.77
HDLBP-236ENST00000477477 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
HDLBP-236ENST00000477477 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
HDLBP-236ENST00000477477 NPM1P06748 294 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDLBP-236ENST00000477477 KIF13AQ9H1H9 1805 aa19.71■□□□□ 0.75
HDLBP-236ENST00000477477 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
HDLBP-236ENST00000477477 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
HDLBP-236ENST00000477477 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
HDLBP-236ENST00000477477 PTPRGP23470 1445 aa19.65■□□□□ 0.74
HDLBP-236ENST00000477477 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
HDLBP-236ENST00000477477 IQGAP2Q13576 1575 aa19.64■□□□□ 0.73
HDLBP-236ENST00000477477 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
HDLBP-236ENST00000477477 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
HDLBP-236ENST00000477477 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
HDLBP-236ENST00000477477 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
HDLBP-236ENST00000477477 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
HDLBP-236ENST00000477477 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
HDLBP-236ENST00000477477 ABCC2Q92887 1545 aa19.55■□□□□ 0.72
HDLBP-236ENST00000477477 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
HDLBP-236ENST00000477477 UHRF1BP1LA0JNW5 1464 aa19.53■□□□□ 0.72
HDLBP-236ENST00000477477 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
HDLBP-236ENST00000477477 ASXL2Q76L83 1435 aa19.48■□□□□ 0.71
HDLBP-236ENST00000477477 PLB1Q6P1J6 1458 aa19.48■□□□□ 0.71
HDLBP-236ENST00000477477 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
HDLBP-236ENST00000477477 KDM6BO15054 1643 aa19.44■□□□□ 0.7
HDLBP-236ENST00000477477 KDM5BQ9UGL1 1544 aa19.43■□□□□ 0.7
HDLBP-236ENST00000477477 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
HDLBP-236ENST00000477477 GLI2P10070 1586 aa19.42■□□□□ 0.7
HDLBP-236ENST00000477477 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
HDLBP-236ENST00000477477 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
HDLBP-236ENST00000477477 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
HDLBP-236ENST00000477477 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
HDLBP-236ENST00000477477 EPRSP07814 1512 aaKnown RBP19.36■□□□□ 0.69
HDLBP-236ENST00000477477 PPRC1Q5VV67 1664 aaKnown RBP19.35■□□□□ 0.69
HDLBP-236ENST00000477477 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
HDLBP-236ENST00000477477 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
HDLBP-236ENST00000477477 ABCA8O94911 1581 aa19.3■□□□□ 0.68
HDLBP-236ENST00000477477 TEX14Q8IWB6 1497 aa19.27■□□□□ 0.67
HDLBP-236ENST00000477477 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
HDLBP-236ENST00000477477 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-236ENST00000477477 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
HDLBP-236ENST00000477477 EEA1Q15075 1411 aa19.19■□□□□ 0.66
HDLBP-236ENST00000477477 MAGI3Q5TCQ9 1506 aa19.17■□□□□ 0.66
HDLBP-236ENST00000477477 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
HDLBP-236ENST00000477477 CD109Q6YHK3 1445 aa19.17■□□□□ 0.66
HDLBP-236ENST00000477477 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
HDLBP-236ENST00000477477 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
HDLBP-236ENST00000477477 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
HDLBP-236ENST00000477477 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.66
HDLBP-236ENST00000477477 ATP10BO94823 1461 aa19.13■□□□□ 0.65
HDLBP-236ENST00000477477 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
HDLBP-236ENST00000477477 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
HDLBP-236ENST00000477477 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
HDLBP-236ENST00000477477 FHOD3Q2V2M9 1422 aa19.04■□□□□ 0.64
HDLBP-236ENST00000477477 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
HDLBP-236ENST00000477477 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
HDLBP-236ENST00000477477 KIF21BO75037 1637 aa19.02■□□□□ 0.64
HDLBP-236ENST00000477477 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.64
HDLBP-236ENST00000477477 ARAP3Q8WWN8 1544 aa19■□□□□ 0.63
HDLBP-236ENST00000477477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
HDLBP-236ENST00000477477 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
HDLBP-236ENST00000477477 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
HDLBP-236ENST00000477477 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
HDLBP-236ENST00000477477 NEO1Q92859 1461 aa18.94■□□□□ 0.62
HDLBP-236ENST00000477477 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
HDLBP-236ENST00000477477 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
HDLBP-236ENST00000477477 RAPGEF3O95398 923 aa18.88■□□□□ 0.61
HDLBP-236ENST00000477477 FRMPD1Q5SYB0 1578 aa18.85■□□□□ 0.61
HDLBP-236ENST00000477477 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
HDLBP-236ENST00000477477 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
HDLBP-236ENST00000477477 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
HDLBP-236ENST00000477477 CDK13Q14004 1512 aaKnown RBP18.84■□□□□ 0.61
HDLBP-236ENST00000477477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDLBP-236ENST00000477477 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
HDLBP-236ENST00000477477 FANCAO15360 1455 aa18.81■□□□□ 0.6
HDLBP-236ENST00000477477 DENND4BO75064 1496 aaPredicted RBP18.81■□□□□ 0.6
HDLBP-236ENST00000477477 FMN1Q68DA7 1419 aa18.81■□□□□ 0.6
HDLBP-236ENST00000477477 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
HDLBP-236ENST00000477477 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
HDLBP-236ENST00000477477 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
HDLBP-236ENST00000477477 HECW1Q76N89 1606 aa18.78■□□□□ 0.6
HDLBP-236ENST00000477477 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
HDLBP-236ENST00000477477 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
HDLBP-236ENST00000477477 RICTORQ6R327 1708 aa18.75■□□□□ 0.59
HDLBP-236ENST00000477477 PTPRMP28827 1452 aa18.74■□□□□ 0.59
HDLBP-236ENST00000477477 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
HDLBP-236ENST00000477477 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
HDLBP-236ENST00000477477 PLCH2O75038 1416 aa18.73■□□□□ 0.59
HDLBP-236ENST00000477477 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
HDLBP-236ENST00000477477 BCORL1Q5H9F3 1711 aa18.71■□□□□ 0.59
HDLBP-236ENST00000477477 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
HDLBP-236ENST00000477477 MADDQ8WXG6 1647 aa18.68■□□□□ 0.58
HDLBP-236ENST00000477477 MAGI2Q86UL8 1455 aa18.68■□□□□ 0.58
HDLBP-236ENST00000477477 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
HDLBP-236ENST00000477477 TROQ12816 1431 aaPredicted RBP18.67■□□□□ 0.58
HDLBP-236ENST00000477477 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
HDLBP-236ENST00000477477 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
HDLBP-236ENST00000477477 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms