RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SUPT5HO00267 1087 aaKnown RBP4.92□□□□□ -1.62
HMGN4-202ENST00000477243 HOXD11P31277 338 aaPredicted RBP4.92□□□□□ -1.62
HMGN4-202ENST00000477243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.91□□□□□ -1.62
HMGN4-202ENST00000477243 HNRNPUL2Q1KMD3 747 aaKnown RBP4.91□□□□□ -1.62
HMGN4-202ENST00000477243 PROM2Q8N271 834 aa4.91□□□□□ -1.62
HMGN4-202ENST00000477243 MAPK8IP2Q13387 824 aaPredicted RBP4.9□□□□□ -1.63
HMGN4-202ENST00000477243 PKD1L2Q7Z442 2459 aa4.9□□□□□ -1.63
HMGN4-202ENST00000477243 PITPNM2Q9BZ72 1349 aa4.9□□□□□ -1.63
HMGN4-202ENST00000477243 UNC79Q9P2D8 2635 aa4.9□□□□□ -1.63
HMGN4-202ENST00000477243 PRELPP51888 382 aa4.89□□□□□ -1.63
HMGN4-202ENST00000477243 APLP2Q06481 763 aa4.89□□□□□ -1.63
HMGN4-202ENST00000477243 SAMD1Q6SPF0 538 aaPredicted RBP4.88□□□□□ -1.63
HMGN4-202ENST00000477243 SPOCK2Q92563 424 aa4.88□□□□□ -1.63
HMGN4-202ENST00000477243 COL26A1Q96A83 441 aa4.88□□□□□ -1.63
HMGN4-202ENST00000477243 KDM6BO15054 1643 aa4.87□□□□□ -1.63
HMGN4-202ENST00000477243 KLHL34Q8N239 644 aa4.87□□□□□ -1.63
HMGN4-202ENST00000477243 TRIM26Q12899 539 aaPredicted RBP4.86□□□□□ -1.63
HMGN4-202ENST00000477243 ATF5Q9Y2D1 282 aaPredicted RBP4.86□□□□□ -1.63
HMGN4-202ENST00000477243 ERCC6Q03468 1493 aa4.83□□□□□ -1.64
HMGN4-202ENST00000477243 RGL2O15211 777 aa4.83□□□□□ -1.64
HMGN4-202ENST00000477243 CHGAP10645 457 aaKnown RBP4.83□□□□□ -1.64
HMGN4-202ENST00000477243 UBTFP17480 764 aaKnown RBP4.83□□□□□ -1.64
HMGN4-202ENST00000477243 CYB5RLQ6IPT4 315 aa4.83□□□□□ -1.64
HMGN4-202ENST00000477243 LTBP4Q8N2S1 1624 aa4.82□□□□□ -1.64
HMGN4-202ENST00000477243 CAPN15O75808 1086 aa4.81□□□□□ -1.64
HMGN4-202ENST00000477243 MSH5O43196 834 aa4.8□□□□□ -1.64
HMGN4-202ENST00000477243 HRCP23327 699 aa4.8□□□□□ -1.64
HMGN4-202ENST00000477243 RBM33Q96EV2 1170 aaKnown RBP4.8□□□□□ -1.64
HMGN4-202ENST00000477243 ZNF219Q9P2Y4 722 aaPredicted RBP4.8□□□□□ -1.64
HMGN4-202ENST00000477243 ARHGEF11O15085 1522 aa4.8□□□□□ -1.64
HMGN4-202ENST00000477243 CCDC9Q9Y3X0 531 aaKnown RBP4.79□□□□□ -1.64
HMGN4-202ENST00000477243 BRPF1P55201 1214 aaPredicted RBP4.78□□□□□ -1.64
HMGN4-202ENST00000477243 P3H3Q8IVL6 736 aa4.78□□□□□ -1.64
HMGN4-202ENST00000477243 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
HMGN4-202ENST00000477243 MED1Q15648 1581 aaPredicted RBP4.78□□□□□ -1.64
HMGN4-202ENST00000477243 ZBTB7CA1YPR0 619 aa4.77□□□□□ -1.65
HMGN4-202ENST00000477243 ZMYND15Q9H091 742 aa4.77□□□□□ -1.65
HMGN4-202ENST00000477243 YY1P25490 414 aa4.76□□□□□ -1.65
HMGN4-202ENST00000477243 HS6ST3Q8IZP7 471 aa4.76□□□□□ -1.65
HMGN4-202ENST00000477243 RSPH6AQ9H0K4 717 aa4.76□□□□□ -1.65
HMGN4-202ENST00000477243 BICRAQ9NZM4 1560 aa4.76□□□□□ -1.65
HMGN4-202ENST00000477243 NEUROD2Q15784 382 aa4.74□□□□□ -1.65
HMGN4-202ENST00000477243 LMOD2Q6P5Q4 547 aa4.74□□□□□ -1.65
HMGN4-202ENST00000477243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGN4-202ENST00000477243 DACH1Q9UI36 760 aa4.73□□□□□ -1.65
HMGN4-202ENST00000477243 STAG3Q9UJ98 1225 aa4.73□□□□□ -1.65
HMGN4-202ENST00000477243 CC2D2AQ9P2K1 1620 aa4.72□□□□□ -1.65
HMGN4-202ENST00000477243 PDIA4P13667 645 aaKnown RBP4.72□□□□□ -1.65
HMGN4-202ENST00000477243 SHROOM4Q9ULL8 1493 aa4.72□□□□□ -1.65
HMGN4-202ENST00000477243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGN4-202ENST00000477243 RYDENQ9NUL5 291 aaKnown RBP4.71□□□□□ -1.66
HMGN4-202ENST00000477243 BAZ1AQ9NRL2 1556 aaPredicted RBP4.7□□□□□ -1.66
HMGN4-202ENST00000477243 PLCD3Q8N3E9 789 aa4.7□□□□□ -1.66
HMGN4-202ENST00000477243 CIZ1Q9ULV3 898 aaPredicted RBP4.7□□□□□ -1.66
HMGN4-202ENST00000477243 HMGB1P09429 215 aaKnown RBP4.69□□□□□ -1.66
HMGN4-202ENST00000477243 MKRN4PQ13434 485 aaPredicted RBP4.69□□□□□ -1.66
HMGN4-202ENST00000477243 GTPBP6O43824 516 aaPredicted RBP4.68□□□□□ -1.66
HMGN4-202ENST00000477243 ZBTB47Q9UFB7 747 aaPredicted RBP4.68□□□□□ -1.66
HMGN4-202ENST00000477243 ADGRL1O94910 1474 aa4.68□□□□□ -1.66
HMGN4-202ENST00000477243 C1QTNF8P60827 252 aa4.67□□□□□ -1.66
HMGN4-202ENST00000477243 WDR70Q9NW82 654 aa4.67□□□□□ -1.66
HMGN4-202ENST00000477243 ARID3AQ99856 593 aa4.66□□□□□ -1.66
HMGN4-202ENST00000477243 PLEKHG5O94827 1062 aa4.65□□□□□ -1.67
HMGN4-202ENST00000477243 MIER1Q8N108 512 aa4.65□□□□□ -1.67
HMGN4-202ENST00000477243 ZC3H15Q8WU90 426 aaKnown RBP4.65□□□□□ -1.67
HMGN4-202ENST00000477243 NKX1-1Q15270 411 aaPredicted RBP4.63□□□□□ -1.67
HMGN4-202ENST00000477243 SLC24A3Q9HC58 644 aa4.63□□□□□ -1.67
HMGN4-202ENST00000477243 U3KPZ7 1027 aaPredicted RBP4.63□□□□□ -1.67
HMGN4-202ENST00000477243 APBB1O00213 710 aa4.6□□□□□ -1.67
HMGN4-202ENST00000477243 GSE1Q14687 1217 aa4.6□□□□□ -1.67
HMGN4-202ENST00000477243 TNS4Q8IZW8 715 aa4.6□□□□□ -1.67
HMGN4-202ENST00000477243 KCTD17Q8N5Z5 321 aa4.6□□□□□ -1.67
HMGN4-202ENST00000477243 SNX27Q96L92 541 aa4.6□□□□□ -1.67
HMGN4-202ENST00000477243 LOC105371045A0A1W2PR82 267 aa4.59□□□□□ -1.67
HMGN4-202ENST00000477243 RIOK3O14730 519 aaKnown RBP4.59□□□□□ -1.67
HMGN4-202ENST00000477243 EIF5BO60841 1220 aaKnown RBP4.59□□□□□ -1.67
HMGN4-202ENST00000477243 KCNV2Q8TDN2 545 aa4.59□□□□□ -1.67
HMGN4-202ENST00000477243 NISCHQ9Y2I1 1504 aa4.58□□□□□ -1.68
HMGN4-202ENST00000477243 SMYD5Q6GMV2 418 aa4.58□□□□□ -1.68
HMGN4-202ENST00000477243 ARHGEF1Q92888 912 aaKnown RBP4.58□□□□□ -1.68
HMGN4-202ENST00000477243 CEP350Q5VT06 3117 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 STK25O00506 426 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 DLL1O00548 723 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 ZMYND10O75800 440 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 FLIIQ13045 1269 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 C1orf115Q9H7X2 142 aa4.57□□□□□ -1.68
HMGN4-202ENST00000477243 ARAP1Q96P48 1450 aa4.56□□□□□ -1.68
HMGN4-202ENST00000477243 HSP90B1P14625 803 aaKnown RBP4.56□□□□□ -1.68
HMGN4-202ENST00000477243 IL27Q8NEV9 243 aa4.56□□□□□ -1.68
HMGN4-202ENST00000477243 NECTIN2Q92692 538 aa4.56□□□□□ -1.68
HMGN4-202ENST00000477243 DCAF8L1A6NGE4 600 aa4.55□□□□□ -1.68
HMGN4-202ENST00000477243 VGFO15240 615 aaPredicted RBP4.55□□□□□ -1.68
HMGN4-202ENST00000477243 RAD21O60216 631 aa4.55□□□□□ -1.68
HMGN4-202ENST00000477243 AK7Q96M32 723 aa4.55□□□□□ -1.68
HMGN4-202ENST00000477243 TRAIPQ9BWF2 469 aa4.55□□□□□ -1.68
HMGN4-202ENST00000477243 ZBTB12Q9Y330 459 aaPredicted RBP4.55□□□□□ -1.68
HMGN4-202ENST00000477243 CEP164Q9UPV0 1460 aa4.55□□□□□ -1.68
HMGN4-202ENST00000477243 CDK11BP21127 795 aaKnown RBP4.54□□□□□ -1.68
HMGN4-202ENST00000477243 RNF25Q96BH1 459 aaPredicted RBP4.54□□□□□ -1.68
HMGN4-202ENST00000477243 CDK11AQ9UQ88 783 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms