RNA–Protein interactions for RNA: ENST00000477031.6

LCK-211, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 4

Gene LCK, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-211ENST00000477031 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
LCK-211ENST00000477031 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
LCK-211ENST00000477031 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
LCK-211ENST00000477031 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
LCK-211ENST00000477031 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
LCK-211ENST00000477031 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
LCK-211ENST00000477031 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
LCK-211ENST00000477031 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
LCK-211ENST00000477031 EEA1Q15075 1411 aa19.59■□□□□ 0.73
LCK-211ENST00000477031 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
LCK-211ENST00000477031 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
LCK-211ENST00000477031 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
LCK-211ENST00000477031 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
LCK-211ENST00000477031 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
LCK-211ENST00000477031 PTPRGP23470 1445 aa19.4■□□□□ 0.7
LCK-211ENST00000477031 KIF21BO75037 1637 aa19.36■□□□□ 0.69
LCK-211ENST00000477031 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
LCK-211ENST00000477031 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.68
LCK-211ENST00000477031 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
LCK-211ENST00000477031 KIAA0556O60303 1618 aa19.3■□□□□ 0.68
LCK-211ENST00000477031 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
LCK-211ENST00000477031 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
LCK-211ENST00000477031 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
LCK-211ENST00000477031 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
LCK-211ENST00000477031 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
LCK-211ENST00000477031 TRHP20396 242 aaPredicted RBP19.25■□□□□ 0.67
LCK-211ENST00000477031 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
LCK-211ENST00000477031 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
LCK-211ENST00000477031 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
LCK-211ENST00000477031 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
LCK-211ENST00000477031 PLB1Q6P1J6 1458 aa19.2■□□□□ 0.66
LCK-211ENST00000477031 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
LCK-211ENST00000477031 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
LCK-211ENST00000477031 MAPKBP1O60336 1514 aa19.15■□□□□ 0.66
LCK-211ENST00000477031 ABCA8O94911 1581 aa19.15■□□□□ 0.66
LCK-211ENST00000477031 FHOD3Q2V2M9 1422 aa19.14■□□□□ 0.65
LCK-211ENST00000477031 ABCC10Q5T3U5 1492 aa19.1■□□□□ 0.65
LCK-211ENST00000477031 ARHGAP35Q9NRY4 1499 aa19.1■□□□□ 0.65
LCK-211ENST00000477031 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
LCK-211ENST00000477031 FAM69CQ0P6D2 419 aa19.09■□□□□ 0.65
LCK-211ENST00000477031 ASXL2Q76L83 1435 aa19.08■□□□□ 0.65
LCK-211ENST00000477031 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.64
LCK-211ENST00000477031 ATP10BO94823 1461 aa19.06■□□□□ 0.64
LCK-211ENST00000477031 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
LCK-211ENST00000477031 ZCCHC11Q5TAX3 1644 aaKnown RBP19.01■□□□□ 0.63
LCK-211ENST00000477031 NUP153P49790 1475 aaKnown RBP19.01■□□□□ 0.63
LCK-211ENST00000477031 DIP2BQ9P265 1576 aa19■□□□□ 0.63
LCK-211ENST00000477031 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
LCK-211ENST00000477031 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
LCK-211ENST00000477031 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
LCK-211ENST00000477031 CLIP1P30622 1438 aa18.95■□□□□ 0.62
LCK-211ENST00000477031 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
LCK-211ENST00000477031 FMN1Q68DA7 1419 aa18.94■□□□□ 0.62
LCK-211ENST00000477031 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
LCK-211ENST00000477031 GLI2P10070 1586 aa18.93■□□□□ 0.62
LCK-211ENST00000477031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
LCK-211ENST00000477031 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
LCK-211ENST00000477031 CEP162Q5TB80 1403 aa18.87■□□□□ 0.61
LCK-211ENST00000477031 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
LCK-211ENST00000477031 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
LCK-211ENST00000477031 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
LCK-211ENST00000477031 CDK13Q14004 1512 aaKnown RBP18.84■□□□□ 0.61
LCK-211ENST00000477031 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
LCK-211ENST00000477031 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
LCK-211ENST00000477031 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
LCK-211ENST00000477031 COL17A1Q9UMD9 1497 aaPredicted RBP18.78■□□□□ 0.6
LCK-211ENST00000477031 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
LCK-211ENST00000477031 HECW1Q76N89 1606 aa18.77■□□□□ 0.6
LCK-211ENST00000477031 TSPOAP1O95153 1857 aa18.76■□□□□ 0.59
LCK-211ENST00000477031 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
LCK-211ENST00000477031 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
LCK-211ENST00000477031 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
LCK-211ENST00000477031 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
LCK-211ENST00000477031 ABCA9Q8IUA7 1624 aa18.73■□□□□ 0.59
LCK-211ENST00000477031 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
LCK-211ENST00000477031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.7■□□□□ 0.58
LCK-211ENST00000477031 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
LCK-211ENST00000477031 TEX14Q8IWB6 1497 aa18.7■□□□□ 0.58
LCK-211ENST00000477031 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
LCK-211ENST00000477031 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
LCK-211ENST00000477031 KDM6BO15054 1643 aa18.64■□□□□ 0.57
LCK-211ENST00000477031 PLCH2O75038 1416 aa18.64■□□□□ 0.57
LCK-211ENST00000477031 PHLDB1Q86UU1 1377 aa18.63■□□□□ 0.57
LCK-211ENST00000477031 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
LCK-211ENST00000477031 ARAP3Q8WWN8 1544 aa18.62■□□□□ 0.57
LCK-211ENST00000477031 KIF14Q15058 1648 aa18.61■□□□□ 0.57
LCK-211ENST00000477031 NEO1Q92859 1461 aa18.6■□□□□ 0.57
LCK-211ENST00000477031 RAPGEF3O95398 923 aa18.59■□□□□ 0.57
LCK-211ENST00000477031 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
LCK-211ENST00000477031 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
LCK-211ENST00000477031 FANCAO15360 1455 aa18.57■□□□□ 0.56
LCK-211ENST00000477031 EFCAB2Q5VUJ9 269 aa18.56■□□□□ 0.56
LCK-211ENST00000477031 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
LCK-211ENST00000477031 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
LCK-211ENST00000477031 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
LCK-211ENST00000477031 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
LCK-211ENST00000477031 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
LCK-211ENST00000477031 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
LCK-211ENST00000477031 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
LCK-211ENST00000477031 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms