RNA–Protein interactions for RNA: ENST00000477008.1

SEC24C-204, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 2

Gene SEC24C, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-204ENST00000477008 ABCA5Q8WWZ7 1642 aa13.43□□□□□ -0.26
SEC24C-204ENST00000477008 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
SEC24C-204ENST00000477008 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
SEC24C-204ENST00000477008 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
SEC24C-204ENST00000477008 KDM6BO15054 1643 aa13.4□□□□□ -0.26
SEC24C-204ENST00000477008 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SEC24C-204ENST00000477008 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
SEC24C-204ENST00000477008 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
SEC24C-204ENST00000477008 DIP2BQ9P265 1576 aa13.34□□□□□ -0.27
SEC24C-204ENST00000477008 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
SEC24C-204ENST00000477008 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
SEC24C-204ENST00000477008 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
SEC24C-204ENST00000477008 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
SEC24C-204ENST00000477008 ADRA2BP18089 450 aa13.25□□□□□ -0.29
SEC24C-204ENST00000477008 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
SEC24C-204ENST00000477008 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
SEC24C-204ENST00000477008 HECW2Q9P2P5 1572 aa13.21□□□□□ -0.29
SEC24C-204ENST00000477008 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
SEC24C-204ENST00000477008 PTPRGP23470 1445 aa13.19□□□□□ -0.3
SEC24C-204ENST00000477008 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
SEC24C-204ENST00000477008 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
SEC24C-204ENST00000477008 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
SEC24C-204ENST00000477008 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
SEC24C-204ENST00000477008 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
SEC24C-204ENST00000477008 GLI2P10070 1586 aa13.14□□□□□ -0.31
SEC24C-204ENST00000477008 ASXL2Q76L83 1435 aa13.13□□□□□ -0.31
SEC24C-204ENST00000477008 ABCC2Q92887 1545 aa13.12□□□□□ -0.31
SEC24C-204ENST00000477008 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
SEC24C-204ENST00000477008 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
SEC24C-204ENST00000477008 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
SEC24C-204ENST00000477008 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
SEC24C-204ENST00000477008 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.31
SEC24C-204ENST00000477008 IGF1RP08069 1367 aa13.06□□□□□ -0.32
SEC24C-204ENST00000477008 UHRF1BP1LA0JNW5 1464 aa13.05□□□□□ -0.32
SEC24C-204ENST00000477008 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
SEC24C-204ENST00000477008 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
SEC24C-204ENST00000477008 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
SEC24C-204ENST00000477008 MAP3K4Q9Y6R4 1608 aa13.01□□□□□ -0.33
SEC24C-204ENST00000477008 CUL7Q14999 1698 aa13.01□□□□□ -0.33
SEC24C-204ENST00000477008 KIF27Q86VH2 1401 aa13□□□□□ -0.33
SEC24C-204ENST00000477008 LMTK3Q96Q04 1460 aa12.99□□□□□ -0.33
SEC24C-204ENST00000477008 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
SEC24C-204ENST00000477008 CARMIL1Q5VZK9 1371 aa12.97□□□□□ -0.33
SEC24C-204ENST00000477008 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
SEC24C-204ENST00000477008 CD109Q6YHK3 1445 aa12.95□□□□□ -0.34
SEC24C-204ENST00000477008 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
SEC24C-204ENST00000477008 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
SEC24C-204ENST00000477008 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
SEC24C-204ENST00000477008 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
SEC24C-204ENST00000477008 SOCS7O14512 581 aa12.91□□□□□ -0.34
SEC24C-204ENST00000477008 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
SEC24C-204ENST00000477008 PTPRMP28827 1452 aa12.9□□□□□ -0.34
SEC24C-204ENST00000477008 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
SEC24C-204ENST00000477008 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
SEC24C-204ENST00000477008 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
SEC24C-204ENST00000477008 KIF21BO75037 1637 aa12.86□□□□□ -0.35
SEC24C-204ENST00000477008 CFAP43Q8NDM7 1665 aa12.86□□□□□ -0.35
SEC24C-204ENST00000477008 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
SEC24C-204ENST00000477008 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
SEC24C-204ENST00000477008 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
SEC24C-204ENST00000477008 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.35
SEC24C-204ENST00000477008 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
SEC24C-204ENST00000477008 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
SEC24C-204ENST00000477008 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
SEC24C-204ENST00000477008 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
SEC24C-204ENST00000477008 KIAA0556O60303 1618 aa12.79□□□□□ -0.36
SEC24C-204ENST00000477008 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
SEC24C-204ENST00000477008 HSPA2P54652 639 aa12.78□□□□□ -0.36
SEC24C-204ENST00000477008 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
SEC24C-204ENST00000477008 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
SEC24C-204ENST00000477008 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
SEC24C-204ENST00000477008 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
SEC24C-204ENST00000477008 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
SEC24C-204ENST00000477008 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
SEC24C-204ENST00000477008 ABCA8O94911 1581 aa12.71□□□□□ -0.37
SEC24C-204ENST00000477008 NEO1Q92859 1461 aa12.71□□□□□ -0.38
SEC24C-204ENST00000477008 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.38
SEC24C-204ENST00000477008 ARID3CA6NKF2 412 aa12.68□□□□□ -0.38
SEC24C-204ENST00000477008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
SEC24C-204ENST00000477008 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
SEC24C-204ENST00000477008 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
SEC24C-204ENST00000477008 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
SEC24C-204ENST00000477008 ATP10BO94823 1461 aa12.65□□□□□ -0.38
SEC24C-204ENST00000477008 FANCAO15360 1455 aa12.63□□□□□ -0.39
SEC24C-204ENST00000477008 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
SEC24C-204ENST00000477008 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
SEC24C-204ENST00000477008 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
SEC24C-204ENST00000477008 MLECQ14165 292 aa12.62□□□□□ -0.39
SEC24C-204ENST00000477008 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
SEC24C-204ENST00000477008 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
SEC24C-204ENST00000477008 CTTNBP2Q8WZ74 1663 aa12.6□□□□□ -0.39
SEC24C-204ENST00000477008 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
SEC24C-204ENST00000477008 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
SEC24C-204ENST00000477008 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
SEC24C-204ENST00000477008 FRMPD1Q5SYB0 1578 aa12.58□□□□□ -0.4
SEC24C-204ENST00000477008 MSH5O43196 834 aa12.56□□□□□ -0.4
SEC24C-204ENST00000477008 MAGI2Q86UL8 1455 aa12.55□□□□□ -0.4
SEC24C-204ENST00000477008 EFCAB5A4FU69 1503 aa12.54□□□□□ -0.4
SEC24C-204ENST00000477008 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
SEC24C-204ENST00000477008 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms