RNA–Protein interactions for RNA: ENST00000476978.1

TCEA3-205, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-205ENST00000476978 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
TCEA3-205ENST00000476978 IGF1RP08069 1367 aa12.47□□□□□ -0.41
TCEA3-205ENST00000476978 PRG4Q92954 1404 aaPredicted RBP12.46□□□□□ -0.41
TCEA3-205ENST00000476978 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
TCEA3-205ENST00000476978 ABCC10Q5T3U5 1492 aa12.46□□□□□ -0.42
TCEA3-205ENST00000476978 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
TCEA3-205ENST00000476978 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
TCEA3-205ENST00000476978 KDM6BO15054 1643 aa12.44□□□□□ -0.42
TCEA3-205ENST00000476978 MAPKBP1O60336 1514 aa12.42□□□□□ -0.42
TCEA3-205ENST00000476978 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
TCEA3-205ENST00000476978 KIAA0586Q9BVV6 1533 aa12.4□□□□□ -0.42
TCEA3-205ENST00000476978 CUL7Q14999 1698 aa12.39□□□□□ -0.43
TCEA3-205ENST00000476978 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCEA3-205ENST00000476978 CARMIL1Q5VZK9 1371 aa12.39□□□□□ -0.43
TCEA3-205ENST00000476978 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
TCEA3-205ENST00000476978 TSPOAP1O95153 1857 aa12.37□□□□□ -0.43
TCEA3-205ENST00000476978 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
TCEA3-205ENST00000476978 PTPRGP23470 1445 aa12.28□□□□□ -0.44
TCEA3-205ENST00000476978 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
TCEA3-205ENST00000476978 CARMIL2Q6F5E8 1435 aa12.28□□□□□ -0.44
TCEA3-205ENST00000476978 ADGRL1O94910 1474 aa12.27□□□□□ -0.44
TCEA3-205ENST00000476978 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.45
TCEA3-205ENST00000476978 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
TCEA3-205ENST00000476978 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
TCEA3-205ENST00000476978 PPRC1Q5VV67 1664 aaKnown RBP12.26□□□□□ -0.45
TCEA3-205ENST00000476978 HECW2Q9P2P5 1572 aa12.25□□□□□ -0.45
TCEA3-205ENST00000476978 GLI2P10070 1586 aa12.22□□□□□ -0.45
TCEA3-205ENST00000476978 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
TCEA3-205ENST00000476978 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
TCEA3-205ENST00000476978 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
TCEA3-205ENST00000476978 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
TCEA3-205ENST00000476978 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
TCEA3-205ENST00000476978 PLB1Q6P1J6 1458 aa12.18□□□□□ -0.46
TCEA3-205ENST00000476978 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
TCEA3-205ENST00000476978 COL17A1Q9UMD9 1497 aaPredicted RBP12.17□□□□□ -0.46
TCEA3-205ENST00000476978 PRXQ9BXM0 1461 aa12.15□□□□□ -0.46
TCEA3-205ENST00000476978 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
TCEA3-205ENST00000476978 KIAA0556O60303 1618 aa12.13□□□□□ -0.47
TCEA3-205ENST00000476978 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
TCEA3-205ENST00000476978 GOLGA3Q08378 1498 aa12.12□□□□□ -0.47
TCEA3-205ENST00000476978 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
TCEA3-205ENST00000476978 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
TCEA3-205ENST00000476978 CTTNBP2Q8WZ74 1663 aa12.11□□□□□ -0.47
TCEA3-205ENST00000476978 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
TCEA3-205ENST00000476978 FBXO41Q8TF61 875 aa12.08□□□□□ -0.48
TCEA3-205ENST00000476978 FAM9AQ8IZU1 332 aaPredicted RBP12.07□□□□□ -0.48
TCEA3-205ENST00000476978 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
TCEA3-205ENST00000476978 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
TCEA3-205ENST00000476978 ABCA8O94911 1581 aa12.04□□□□□ -0.48
TCEA3-205ENST00000476978 EEA1Q15075 1411 aa12.03□□□□□ -0.48
TCEA3-205ENST00000476978 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
TCEA3-205ENST00000476978 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
TCEA3-205ENST00000476978 KIF21BO75037 1637 aa12.01□□□□□ -0.49
TCEA3-205ENST00000476978 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
TCEA3-205ENST00000476978 MAGI3Q5TCQ9 1506 aa11.98□□□□□ -0.49
TCEA3-205ENST00000476978 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
TCEA3-205ENST00000476978 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
TCEA3-205ENST00000476978 CD109Q6YHK3 1445 aa11.97□□□□□ -0.49
TCEA3-205ENST00000476978 ATP10BO94823 1461 aa11.96□□□□□ -0.49
TCEA3-205ENST00000476978 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
TCEA3-205ENST00000476978 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
TCEA3-205ENST00000476978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
TCEA3-205ENST00000476978 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
TCEA3-205ENST00000476978 PTPRMP28827 1452 aa11.93□□□□□ -0.5
TCEA3-205ENST00000476978 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
TCEA3-205ENST00000476978 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
TCEA3-205ENST00000476978 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
TCEA3-205ENST00000476978 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
TCEA3-205ENST00000476978 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
TCEA3-205ENST00000476978 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
TCEA3-205ENST00000476978 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
TCEA3-205ENST00000476978 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
TCEA3-205ENST00000476978 BCORL1Q5H9F3 1711 aa11.87□□□□□ -0.51
TCEA3-205ENST00000476978 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
TCEA3-205ENST00000476978 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
TCEA3-205ENST00000476978 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
TCEA3-205ENST00000476978 MADDQ8WXG6 1647 aa11.86□□□□□ -0.51
TCEA3-205ENST00000476978 EFCAB5A4FU69 1503 aa11.86□□□□□ -0.51
TCEA3-205ENST00000476978 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
TCEA3-205ENST00000476978 NEO1Q92859 1461 aa11.81□□□□□ -0.52
TCEA3-205ENST00000476978 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
TCEA3-205ENST00000476978 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
TCEA3-205ENST00000476978 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
TCEA3-205ENST00000476978 FMN1Q68DA7 1419 aa11.78□□□□□ -0.52
TCEA3-205ENST00000476978 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
TCEA3-205ENST00000476978 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
TCEA3-205ENST00000476978 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.52
TCEA3-205ENST00000476978 HSPA2P54652 639 aa11.77□□□□□ -0.53
TCEA3-205ENST00000476978 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
TCEA3-205ENST00000476978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.76□□□□□ -0.53
TCEA3-205ENST00000476978 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
TCEA3-205ENST00000476978 SOCS7O14512 581 aa11.75□□□□□ -0.53
TCEA3-205ENST00000476978 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
TCEA3-205ENST00000476978 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
TCEA3-205ENST00000476978 FANCAO15360 1455 aa11.75□□□□□ -0.53
TCEA3-205ENST00000476978 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
TCEA3-205ENST00000476978 DISP3Q9P2K9 1392 aa11.74□□□□□ -0.53
TCEA3-205ENST00000476978 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
TCEA3-205ENST00000476978 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
TCEA3-205ENST00000476978 HECW1Q76N89 1606 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms