RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
PSMD4-211ENST00000476855 IGF1RP08069 1367 aa26.28■■□□□ 1.8
PSMD4-211ENST00000476855 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
PSMD4-211ENST00000476855 KIF21BO75037 1637 aa26.25■■□□□ 1.79
PSMD4-211ENST00000476855 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
PSMD4-211ENST00000476855 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
PSMD4-211ENST00000476855 PRXQ9BXM0 1461 aa26.2■■□□□ 1.78
PSMD4-211ENST00000476855 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
PSMD4-211ENST00000476855 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.78
PSMD4-211ENST00000476855 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
PSMD4-211ENST00000476855 JPH4Q96JJ6 628 aa26.1■■□□□ 1.77
PSMD4-211ENST00000476855 RAPGEF2Q9Y4G8 1499 aa26.1■■□□□ 1.77
PSMD4-211ENST00000476855 FAM69CQ0P6D2 419 aa26.05■■□□□ 1.76
PSMD4-211ENST00000476855 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
PSMD4-211ENST00000476855 NPM1P06748 294 aaKnown RBP eCLIP26.02■■□□□ 1.76
PSMD4-211ENST00000476855 ABCC10Q5T3U5 1492 aa26.02■■□□□ 1.76
PSMD4-211ENST00000476855 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
PSMD4-211ENST00000476855 MAPKBP1O60336 1514 aa25.95■■□□□ 1.74
PSMD4-211ENST00000476855 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
PSMD4-211ENST00000476855 LOC105371045A0A1W2PR82 267 aa25.91■■□□□ 1.74
PSMD4-211ENST00000476855 ADCY10Q96PN6 1610 aa25.88■■□□□ 1.73
PSMD4-211ENST00000476855 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
PSMD4-211ENST00000476855 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
PSMD4-211ENST00000476855 KDM6BO15054 1643 aa25.83■■□□□ 1.73
PSMD4-211ENST00000476855 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
PSMD4-211ENST00000476855 KIAA0586Q9BVV6 1533 aa25.79■■□□□ 1.72
PSMD4-211ENST00000476855 IQGAP2Q13576 1575 aa25.78■■□□□ 1.72
PSMD4-211ENST00000476855 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
PSMD4-211ENST00000476855 TSPOAP1O95153 1857 aa25.72■■□□□ 1.71
PSMD4-211ENST00000476855 PTPRGP23470 1445 aa25.67■■□□□ 1.7
PSMD4-211ENST00000476855 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
PSMD4-211ENST00000476855 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
PSMD4-211ENST00000476855 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
PSMD4-211ENST00000476855 TTBK1Q5TCY1 1321 aaPredicted RBP25.62■■□□□ 1.69
PSMD4-211ENST00000476855 ABCC2Q92887 1545 aa25.59■■□□□ 1.69
PSMD4-211ENST00000476855 ILDR1Q86SU0 546 aaPredicted RBP25.59■■□□□ 1.69
PSMD4-211ENST00000476855 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
PSMD4-211ENST00000476855 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
PSMD4-211ENST00000476855 ASXL2Q76L83 1435 aa25.56■■□□□ 1.68
PSMD4-211ENST00000476855 PLB1Q6P1J6 1458 aa25.56■■□□□ 1.68
PSMD4-211ENST00000476855 CLIP1P30622 1438 aa25.55■■□□□ 1.68
PSMD4-211ENST00000476855 ARHGAP35Q9NRY4 1499 aa25.55■■□□□ 1.68
PSMD4-211ENST00000476855 KIAA0556O60303 1618 aa25.55■■□□□ 1.68
PSMD4-211ENST00000476855 DISP1Q96F81 1524 aa25.53■■□□□ 1.68
PSMD4-211ENST00000476855 GLI2P10070 1586 aa25.52■■□□□ 1.68
PSMD4-211ENST00000476855 PPRC1Q5VV67 1664 aaKnown RBP25.49■■□□□ 1.67
PSMD4-211ENST00000476855 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
PSMD4-211ENST00000476855 UHRF1BP1LA0JNW5 1464 aa25.48■■□□□ 1.67
PSMD4-211ENST00000476855 RANGAP1P46060 587 aaPredicted RBP25.47■■□□□ 1.67
PSMD4-211ENST00000476855 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
PSMD4-211ENST00000476855 COL17A1Q9UMD9 1497 aaPredicted RBP25.41■■□□□ 1.66
PSMD4-211ENST00000476855 FHOD3Q2V2M9 1422 aa25.4■■□□□ 1.66
PSMD4-211ENST00000476855 EPRSP07814 1512 aaKnown RBP25.4■■□□□ 1.66
PSMD4-211ENST00000476855 KDM5BQ9UGL1 1544 aa25.37■■□□□ 1.65
PSMD4-211ENST00000476855 TEX14Q8IWB6 1497 aa25.36■■□□□ 1.65
PSMD4-211ENST00000476855 MAP3K4Q9Y6R4 1608 aa25.36■■□□□ 1.65
PSMD4-211ENST00000476855 P3H3Q8IVL6 736 aa25.33■■□□□ 1.65
PSMD4-211ENST00000476855 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
PSMD4-211ENST00000476855 ZCCHC11Q5TAX3 1644 aaKnown RBP25.29■■□□□ 1.64
PSMD4-211ENST00000476855 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
PSMD4-211ENST00000476855 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
PSMD4-211ENST00000476855 FMN1Q68DA7 1419 aa25.26■■□□□ 1.63
PSMD4-211ENST00000476855 LRRIQ1Q96JM4 1722 aa25.25■■□□□ 1.63
PSMD4-211ENST00000476855 RAPGEF6Q8TEU7 1601 aa25.23■■□□□ 1.63
PSMD4-211ENST00000476855 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
PSMD4-211ENST00000476855 ABCA8O94911 1581 aa25.22■■□□□ 1.63
PSMD4-211ENST00000476855 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
PSMD4-211ENST00000476855 CASKIN1Q8WXD9 1431 aa25.17■■□□□ 1.62
PSMD4-211ENST00000476855 HECW1Q76N89 1606 aa25.16■■□□□ 1.62
PSMD4-211ENST00000476855 CD109Q6YHK3 1445 aa25.13■■□□□ 1.61
PSMD4-211ENST00000476855 MAGI3Q5TCQ9 1506 aa25.13■■□□□ 1.61
PSMD4-211ENST00000476855 CFAP43Q8NDM7 1665 aa25.12■■□□□ 1.61
PSMD4-211ENST00000476855 KCNH8Q96L42 1107 aa25.1■■□□□ 1.61
PSMD4-211ENST00000476855 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
PSMD4-211ENST00000476855 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
PSMD4-211ENST00000476855 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
PSMD4-211ENST00000476855 CCDC18Q5T9S5 1454 aa25.01■■□□□ 1.59
PSMD4-211ENST00000476855 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
PSMD4-211ENST00000476855 ARAP3Q8WWN8 1544 aa24.95■■□□□ 1.58
PSMD4-211ENST00000476855 ATP10BO94823 1461 aa24.95■■□□□ 1.58
PSMD4-211ENST00000476855 FBXO41Q8TF61 875 aa24.94■■□□□ 1.58
PSMD4-211ENST00000476855 ATP1B4Q9UN42 357 aaPredicted RBP24.92■■□□□ 1.58
PSMD4-211ENST00000476855 PTPRMP28827 1452 aa24.86■■□□□ 1.57
PSMD4-211ENST00000476855 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
PSMD4-211ENST00000476855 ARID3CA6NKF2 412 aa24.86■■□□□ 1.57
PSMD4-211ENST00000476855 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
PSMD4-211ENST00000476855 EHBP1L1Q8N3D4 1523 aa24.84■■□□□ 1.57
PSMD4-211ENST00000476855 APLP2Q06481 763 aa24.82■■□□□ 1.56
PSMD4-211ENST00000476855 ADAMTSL3P82987 1691 aa24.81■■□□□ 1.56
PSMD4-211ENST00000476855 RAPGEF3O95398 923 aa24.81■■□□□ 1.56
PSMD4-211ENST00000476855 ABCA9Q8IUA7 1624 aa24.8■■□□□ 1.56
PSMD4-211ENST00000476855 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
PSMD4-211ENST00000476855 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
PSMD4-211ENST00000476855 TROQ12816 1431 aaPredicted RBP24.76■■□□□ 1.55
PSMD4-211ENST00000476855 NEO1Q92859 1461 aa24.76■■□□□ 1.55
PSMD4-211ENST00000476855 KIF14Q15058 1648 aa24.75■■□□□ 1.55
PSMD4-211ENST00000476855 ARID4BQ4LE39 1312 aaPredicted RBP24.74■■□□□ 1.55
PSMD4-211ENST00000476855 MTUS2Q5JR59 1369 aa24.74■■□□□ 1.55
PSMD4-211ENST00000476855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
PSMD4-211ENST00000476855 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms