RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
SEC13-214ENST00000476597 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
SEC13-214ENST00000476597 CUL7Q14999 1698 aa18.52■□□□□ 0.56
SEC13-214ENST00000476597 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
SEC13-214ENST00000476597 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
SEC13-214ENST00000476597 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
SEC13-214ENST00000476597 PTPRGP23470 1445 aa18.38■□□□□ 0.53
SEC13-214ENST00000476597 CARMIL2Q6F5E8 1435 aa18.37■□□□□ 0.53
SEC13-214ENST00000476597 TNIKQ9UKE5 1360 aa18.35■□□□□ 0.53
SEC13-214ENST00000476597 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
SEC13-214ENST00000476597 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
SEC13-214ENST00000476597 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
SEC13-214ENST00000476597 ADCY10Q96PN6 1610 aa18.29■□□□□ 0.52
SEC13-214ENST00000476597 ABCC10Q5T3U5 1492 aa18.28■□□□□ 0.52
SEC13-214ENST00000476597 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
SEC13-214ENST00000476597 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
SEC13-214ENST00000476597 MAPKBP1O60336 1514 aa18.27■□□□□ 0.51
SEC13-214ENST00000476597 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
SEC13-214ENST00000476597 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
SEC13-214ENST00000476597 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
SEC13-214ENST00000476597 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
SEC13-214ENST00000476597 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
SEC13-214ENST00000476597 KIF13AQ9H1H9 1805 aa18.18■□□□□ 0.5
SEC13-214ENST00000476597 DIP2BQ9P265 1576 aa18.16■□□□□ 0.5
SEC13-214ENST00000476597 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
SEC13-214ENST00000476597 ASXL2Q76L83 1435 aa18.14■□□□□ 0.49
SEC13-214ENST00000476597 GOLGA3Q08378 1498 aa18.14■□□□□ 0.49
SEC13-214ENST00000476597 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
SEC13-214ENST00000476597 EEA1Q15075 1411 aa18.12■□□□□ 0.49
SEC13-214ENST00000476597 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
SEC13-214ENST00000476597 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
SEC13-214ENST00000476597 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
SEC13-214ENST00000476597 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
SEC13-214ENST00000476597 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
SEC13-214ENST00000476597 GLI2P10070 1586 aa18.04■□□□□ 0.48
SEC13-214ENST00000476597 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
SEC13-214ENST00000476597 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
SEC13-214ENST00000476597 ABCA8O94911 1581 aa18■□□□□ 0.47
SEC13-214ENST00000476597 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
SEC13-214ENST00000476597 WDR7Q9Y4E6 1490 aa17.96■□□□□ 0.47
SEC13-214ENST00000476597 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
SEC13-214ENST00000476597 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
SEC13-214ENST00000476597 KDM6BO15054 1643 aa17.94■□□□□ 0.46
SEC13-214ENST00000476597 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
SEC13-214ENST00000476597 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
SEC13-214ENST00000476597 ARID3CA6NKF2 412 aa17.92■□□□□ 0.46
SEC13-214ENST00000476597 ATP10BO94823 1461 aa17.92■□□□□ 0.46
SEC13-214ENST00000476597 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
SEC13-214ENST00000476597 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
SEC13-214ENST00000476597 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
SEC13-214ENST00000476597 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
SEC13-214ENST00000476597 KIF21BO75037 1637 aa17.88■□□□□ 0.45
SEC13-214ENST00000476597 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
SEC13-214ENST00000476597 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
SEC13-214ENST00000476597 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
SEC13-214ENST00000476597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
SEC13-214ENST00000476597 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
SEC13-214ENST00000476597 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
SEC13-214ENST00000476597 MAGI3Q5TCQ9 1506 aa17.84■□□□□ 0.45
SEC13-214ENST00000476597 KDM4FA0A1W2PPD8 638 aa17.83■□□□□ 0.44
SEC13-214ENST00000476597 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
SEC13-214ENST00000476597 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
SEC13-214ENST00000476597 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
SEC13-214ENST00000476597 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
SEC13-214ENST00000476597 CFAP43Q8NDM7 1665 aa17.77■□□□□ 0.43
SEC13-214ENST00000476597 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
SEC13-214ENST00000476597 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
SEC13-214ENST00000476597 ABCA9Q8IUA7 1624 aa17.7■□□□□ 0.42
SEC13-214ENST00000476597 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
SEC13-214ENST00000476597 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
SEC13-214ENST00000476597 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
SEC13-214ENST00000476597 NEO1Q92859 1461 aa17.65■□□□□ 0.42
SEC13-214ENST00000476597 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
SEC13-214ENST00000476597 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
SEC13-214ENST00000476597 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
SEC13-214ENST00000476597 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
SEC13-214ENST00000476597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEC13-214ENST00000476597 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
SEC13-214ENST00000476597 FANCAO15360 1455 aa17.56■□□□□ 0.4
SEC13-214ENST00000476597 PLCH2O75038 1416 aa17.55■□□□□ 0.4
SEC13-214ENST00000476597 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
SEC13-214ENST00000476597 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
SEC13-214ENST00000476597 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
SEC13-214ENST00000476597 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
SEC13-214ENST00000476597 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
SEC13-214ENST00000476597 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
SEC13-214ENST00000476597 CLIP1P30622 1438 aa17.5■□□□□ 0.39
SEC13-214ENST00000476597 FRMPD1Q5SYB0 1578 aa17.48■□□□□ 0.39
SEC13-214ENST00000476597 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
SEC13-214ENST00000476597 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.38
SEC13-214ENST00000476597 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
SEC13-214ENST00000476597 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
SEC13-214ENST00000476597 KIF14Q15058 1648 aa17.42■□□□□ 0.38
SEC13-214ENST00000476597 PCF11O94913 1555 aaKnown RBP17.41■□□□□ 0.38
SEC13-214ENST00000476597 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
SEC13-214ENST00000476597 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
SEC13-214ENST00000476597 POGZQ7Z3K3 1410 aa17.4■□□□□ 0.38
SEC13-214ENST00000476597 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
SEC13-214ENST00000476597 RICTORQ6R327 1708 aa17.4■□□□□ 0.38
SEC13-214ENST00000476597 LRRIQ1Q96JM4 1722 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms