RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
RAB5A-208ENST00000476544 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
RAB5A-208ENST00000476544 CUL7Q14999 1698 aa23.08■■□□□ 1.29
RAB5A-208ENST00000476544 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
RAB5A-208ENST00000476544 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
RAB5A-208ENST00000476544 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
RAB5A-208ENST00000476544 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
RAB5A-208ENST00000476544 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
RAB5A-208ENST00000476544 TRHP20396 242 aaPredicted RBP22.86■■□□□ 1.25
RAB5A-208ENST00000476544 PTPRGP23470 1445 aa22.85■■□□□ 1.25
RAB5A-208ENST00000476544 EEA1Q15075 1411 aa22.85■■□□□ 1.25
RAB5A-208ENST00000476544 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
RAB5A-208ENST00000476544 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
RAB5A-208ENST00000476544 IQGAP2Q13576 1575 aa22.83■■□□□ 1.25
RAB5A-208ENST00000476544 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
RAB5A-208ENST00000476544 UGGT2Q9NYU1 1516 aa22.8■■□□□ 1.24
RAB5A-208ENST00000476544 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
RAB5A-208ENST00000476544 P3H3Q8IVL6 736 aa22.7■■□□□ 1.22
RAB5A-208ENST00000476544 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
RAB5A-208ENST00000476544 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
RAB5A-208ENST00000476544 ADCY10Q96PN6 1610 aa22.67■■□□□ 1.22
RAB5A-208ENST00000476544 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
RAB5A-208ENST00000476544 KIAA0556O60303 1618 aa22.62■■□□□ 1.21
RAB5A-208ENST00000476544 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
RAB5A-208ENST00000476544 UHRF1BP1LA0JNW5 1464 aa22.61■■□□□ 1.21
RAB5A-208ENST00000476544 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
RAB5A-208ENST00000476544 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
RAB5A-208ENST00000476544 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
RAB5A-208ENST00000476544 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
RAB5A-208ENST00000476544 PLB1Q6P1J6 1458 aa22.57■■□□□ 1.2
RAB5A-208ENST00000476544 KIF21BO75037 1637 aa22.56■■□□□ 1.2
RAB5A-208ENST00000476544 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
RAB5A-208ENST00000476544 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
RAB5A-208ENST00000476544 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
RAB5A-208ENST00000476544 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.19
RAB5A-208ENST00000476544 ASXL2Q76L83 1435 aa22.48■■□□□ 1.19
RAB5A-208ENST00000476544 ABCA8O94911 1581 aa22.47■■□□□ 1.19
RAB5A-208ENST00000476544 ARID3CA6NKF2 412 aa22.45■■□□□ 1.18
RAB5A-208ENST00000476544 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
RAB5A-208ENST00000476544 SAMD9Q5K651 1589 aa22.45■■□□□ 1.18
RAB5A-208ENST00000476544 ATP10BO94823 1461 aa22.41■■□□□ 1.18
RAB5A-208ENST00000476544 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
RAB5A-208ENST00000476544 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
RAB5A-208ENST00000476544 ARHGAP35Q9NRY4 1499 aa22.35■■□□□ 1.17
RAB5A-208ENST00000476544 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
RAB5A-208ENST00000476544 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
RAB5A-208ENST00000476544 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
RAB5A-208ENST00000476544 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
RAB5A-208ENST00000476544 NUP153P49790 1475 aaKnown RBP22.3■■□□□ 1.16
RAB5A-208ENST00000476544 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
RAB5A-208ENST00000476544 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
RAB5A-208ENST00000476544 GLI2P10070 1586 aa22.28■■□□□ 1.16
RAB5A-208ENST00000476544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
RAB5A-208ENST00000476544 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
RAB5A-208ENST00000476544 RAPGEF6Q8TEU7 1601 aa22.22■■□□□ 1.15
RAB5A-208ENST00000476544 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
RAB5A-208ENST00000476544 COL17A1Q9UMD9 1497 aaPredicted RBP22.19■■□□□ 1.14
RAB5A-208ENST00000476544 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
RAB5A-208ENST00000476544 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
RAB5A-208ENST00000476544 CD109Q6YHK3 1445 aa22.17■■□□□ 1.14
RAB5A-208ENST00000476544 CLIP1P30622 1438 aa22.15■■□□□ 1.14
RAB5A-208ENST00000476544 PPRC1Q5VV67 1664 aaKnown RBP22.12■■□□□ 1.13
RAB5A-208ENST00000476544 MAP3K4Q9Y6R4 1608 aa22.11■■□□□ 1.13
RAB5A-208ENST00000476544 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
RAB5A-208ENST00000476544 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
RAB5A-208ENST00000476544 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
RAB5A-208ENST00000476544 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
RAB5A-208ENST00000476544 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
RAB5A-208ENST00000476544 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.12
RAB5A-208ENST00000476544 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
RAB5A-208ENST00000476544 KDM6BO15054 1643 aa21.98■■□□□ 1.11
RAB5A-208ENST00000476544 ABCA9Q8IUA7 1624 aa21.98■■□□□ 1.11
RAB5A-208ENST00000476544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
RAB5A-208ENST00000476544 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
RAB5A-208ENST00000476544 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
RAB5A-208ENST00000476544 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
RAB5A-208ENST00000476544 HECW1Q76N89 1606 aa21.94■■□□□ 1.1
RAB5A-208ENST00000476544 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
RAB5A-208ENST00000476544 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
RAB5A-208ENST00000476544 ARAP3Q8WWN8 1544 aa21.91■■□□□ 1.1
RAB5A-208ENST00000476544 PLCH2O75038 1416 aa21.9■■□□□ 1.1
RAB5A-208ENST00000476544 KDM4FA0A1W2PPD8 638 aa21.9■■□□□ 1.1
RAB5A-208ENST00000476544 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
RAB5A-208ENST00000476544 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
RAB5A-208ENST00000476544 NEO1Q92859 1461 aa21.87■■□□□ 1.09
RAB5A-208ENST00000476544 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
RAB5A-208ENST00000476544 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
RAB5A-208ENST00000476544 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
RAB5A-208ENST00000476544 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
RAB5A-208ENST00000476544 FANCAO15360 1455 aa21.83■■□□□ 1.08
RAB5A-208ENST00000476544 KIF14Q15058 1648 aa21.81■■□□□ 1.08
RAB5A-208ENST00000476544 SCAPERQ9BY12 1400 aa21.76■■□□□ 1.07
RAB5A-208ENST00000476544 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
RAB5A-208ENST00000476544 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
RAB5A-208ENST00000476544 AFAP1Q8N556 730 aa21.74■■□□□ 1.07
RAB5A-208ENST00000476544 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
RAB5A-208ENST00000476544 GPATCH8Q9UKJ3 1502 aaKnown RBP21.71■■□□□ 1.07
RAB5A-208ENST00000476544 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
RAB5A-208ENST00000476544 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
RAB5A-208ENST00000476544 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms