RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 RAPGEF2Q9Y4G8 1499 aa35.14■■■■□ 3.22
MAP1LC3A-204ENST00000476428 CSRNP3Q8WYN3 585 aa35.12■■■■□ 3.21
MAP1LC3A-204ENST00000476428 JPH4Q96JJ6 628 aa35.12■■■■□ 3.21
MAP1LC3A-204ENST00000476428 KIAA0586Q9BVV6 1533 aa35.08■■■■□ 3.21
MAP1LC3A-204ENST00000476428 EEA1Q15075 1411 aa35.06■■■■□ 3.2
MAP1LC3A-204ENST00000476428 PRXQ9BXM0 1461 aa35.05■■■■□ 3.2
MAP1LC3A-204ENST00000476428 FAM9AQ8IZU1 332 aaPredicted RBP35.05■■■■□ 3.2
MAP1LC3A-204ENST00000476428 SHROOM2Q13796 1616 aa35.02■■■■□ 3.2
MAP1LC3A-204ENST00000476428 PRG4Q92954 1404 aaPredicted RBP34.98■■■■□ 3.19
MAP1LC3A-204ENST00000476428 ERCC6L2Q5T890 1561 aa34.98■■■■□ 3.19
MAP1LC3A-204ENST00000476428 AEBP2Q6ZN18 517 aaPredicted RBP34.9■■■■□ 3.18
MAP1LC3A-204ENST00000476428 IQGAP2Q13576 1575 aa34.82■■■■□ 3.16
MAP1LC3A-204ENST00000476428 CARMIL2Q6F5E8 1435 aa34.7■■■■□ 3.15
MAP1LC3A-204ENST00000476428 UGGT2Q9NYU1 1516 aa34.68■■■■□ 3.14
MAP1LC3A-204ENST00000476428 DISP1Q96F81 1524 aa34.64■■■■□ 3.14
MAP1LC3A-204ENST00000476428 KIF21BO75037 1637 aa34.63■■■■□ 3.13
MAP1LC3A-204ENST00000476428 CTTNBP2Q8WZ74 1663 aa34.62■■■■□ 3.13
MAP1LC3A-204ENST00000476428 TNIKQ9UKE5 1360 aa34.62■■■■□ 3.13
MAP1LC3A-204ENST00000476428 EHMT2Q96KQ7 1210 aa34.6■■■■□ 3.13
MAP1LC3A-204ENST00000476428 PTPRGP23470 1445 aa34.6■■■■□ 3.13
MAP1LC3A-204ENST00000476428 TTBK1Q5TCY1 1321 aaPredicted RBP34.59■■■■□ 3.13
MAP1LC3A-204ENST00000476428 UBTFP17480 764 aaKnown RBP34.5■■■■□ 3.11
MAP1LC3A-204ENST00000476428 GOLGA3Q08378 1498 aa34.49■■■■□ 3.11
MAP1LC3A-204ENST00000476428 KIAA0556O60303 1618 aa34.48■■■■□ 3.11
MAP1LC3A-204ENST00000476428 RANGAP1P46060 587 aaPredicted RBP34.43■■■■□ 3.1
MAP1LC3A-204ENST00000476428 P3H3Q8IVL6 736 aa34.42■■■■□ 3.1
MAP1LC3A-204ENST00000476428 NPM1P06748 294 aaKnown RBP eCLIP34.37■■■■□ 3.09
MAP1LC3A-204ENST00000476428 ADCY10Q96PN6 1610 aa34.34■■■■□ 3.09
MAP1LC3A-204ENST00000476428 UACAQ9BZF9 1416 aa34.34■■■■□ 3.09
MAP1LC3A-204ENST00000476428 SAMD9Q5K651 1589 aa34.28■■■■□ 3.08
MAP1LC3A-204ENST00000476428 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
MAP1LC3A-204ENST00000476428 PLB1Q6P1J6 1458 aa34.22■■■■□ 3.07
MAP1LC3A-204ENST00000476428 ABCC2Q92887 1545 aa34.22■■■■□ 3.07
MAP1LC3A-204ENST00000476428 FHOD3Q2V2M9 1422 aa34.18■■■■□ 3.06
MAP1LC3A-204ENST00000476428 EFCAB5A4FU69 1503 aa34.14■■■■□ 3.06
MAP1LC3A-204ENST00000476428 ABCA8O94911 1581 aa34.14■■■■□ 3.06
MAP1LC3A-204ENST00000476428 MAPKBP1O60336 1514 aa34.12■■■■□ 3.05
MAP1LC3A-204ENST00000476428 KDM5BQ9UGL1 1544 aa34.11■■■■□ 3.05
MAP1LC3A-204ENST00000476428 ARHGAP35Q9NRY4 1499 aa34.07■■■■□ 3.05
MAP1LC3A-204ENST00000476428 FAM69CQ0P6D2 419 aa34.02■■■■□ 3.04
MAP1LC3A-204ENST00000476428 ASXL2Q76L83 1435 aa34.02■■■■□ 3.04
MAP1LC3A-204ENST00000476428 ABCC10Q5T3U5 1492 aa34.01■■■■□ 3.04
MAP1LC3A-204ENST00000476428 LOC105371045A0A1W2PR82 267 aa34.01■■■■□ 3.03
MAP1LC3A-204ENST00000476428 ARID3CA6NKF2 412 aa34■■■■□ 3.03
MAP1LC3A-204ENST00000476428 KIF13AQ9H1H9 1805 aa34■■■■□ 3.03
MAP1LC3A-204ENST00000476428 ZCCHC11Q5TAX3 1644 aaKnown RBP33.97■■■■□ 3.03
MAP1LC3A-204ENST00000476428 RAPGEF6Q8TEU7 1601 aa33.93■■■■□ 3.02
MAP1LC3A-204ENST00000476428 ATP10BO94823 1461 aa33.93■■■■□ 3.02
MAP1LC3A-204ENST00000476428 CLIP1P30622 1438 aa33.91■■■■□ 3.02
MAP1LC3A-204ENST00000476428 FMN1Q68DA7 1419 aa33.89■■■■□ 3.02
MAP1LC3A-204ENST00000476428 DIP2BQ9P265 1576 aa33.89■■■■□ 3.02
MAP1LC3A-204ENST00000476428 NUP153P49790 1475 aaKnown RBP33.88■■■■□ 3.01
MAP1LC3A-204ENST00000476428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.84■■■■□ 3.01
MAP1LC3A-204ENST00000476428 HNRNPUL2Q1KMD3 747 aaKnown RBP33.84■■■■□ 3.01
MAP1LC3A-204ENST00000476428 WDR7Q9Y4E6 1490 aa33.83■■■■□ 3.01
MAP1LC3A-204ENST00000476428 EPRSP07814 1512 aaKnown RBP33.81■■■■□ 3
MAP1LC3A-204ENST00000476428 KCNH8Q96L42 1107 aa33.8■■■■□ 3
MAP1LC3A-204ENST00000476428 ATP1B4Q9UN42 357 aaPredicted RBP33.8■■■■□ 3
MAP1LC3A-204ENST00000476428 CEP162Q5TB80 1403 aa33.77■■■■□ 3
MAP1LC3A-204ENST00000476428 GLI2P10070 1586 aa33.75■■■□□ 2.99
MAP1LC3A-204ENST00000476428 PLEKHD1A6NEE1 506 aa33.69■■■□□ 2.98
MAP1LC3A-204ENST00000476428 CASKIN1Q8WXD9 1431 aa33.66■■■□□ 2.98
MAP1LC3A-204ENST00000476428 HECW1Q76N89 1606 aa33.64■■■□□ 2.98
MAP1LC3A-204ENST00000476428 CDK13Q14004 1512 aaKnown RBP33.64■■■□□ 2.98
MAP1LC3A-204ENST00000476428 KDM4FA0A1W2PPD8 638 aa33.61■■■□□ 2.97
MAP1LC3A-204ENST00000476428 PCF11O94913 1555 aaKnown RBP33.57■■■□□ 2.96
MAP1LC3A-204ENST00000476428 CD109Q6YHK3 1445 aa33.56■■■□□ 2.96
MAP1LC3A-204ENST00000476428 MAP3K4Q9Y6R4 1608 aa33.55■■■□□ 2.96
MAP1LC3A-204ENST00000476428 CDK11AQ9UQ88 783 aaPredicted RBP33.55■■■□□ 2.96
MAP1LC3A-204ENST00000476428 KDM6BO15054 1643 aa33.54■■■□□ 2.96
MAP1LC3A-204ENST00000476428 TSPOAP1O95153 1857 aa33.54■■■□□ 2.96
MAP1LC3A-204ENST00000476428 FYCO1Q9BQS8 1478 aa33.52■■■□□ 2.96
MAP1LC3A-204ENST00000476428 PPRC1Q5VV67 1664 aaKnown RBP33.48■■■□□ 2.95
MAP1LC3A-204ENST00000476428 CCDC18Q5T9S5 1454 aa33.46■■■□□ 2.95
MAP1LC3A-204ENST00000476428 MAGI3Q5TCQ9 1506 aa33.45■■■□□ 2.95
MAP1LC3A-204ENST00000476428 CFAP43Q8NDM7 1665 aa33.44■■■□□ 2.94
MAP1LC3A-204ENST00000476428 TEX14Q8IWB6 1497 aa33.44■■■□□ 2.94
MAP1LC3A-204ENST00000476428 ABCA9Q8IUA7 1624 aa33.42■■■□□ 2.94
MAP1LC3A-204ENST00000476428 LRRIQ1Q96JM4 1722 aa33.42■■■□□ 2.94
MAP1LC3A-204ENST00000476428 TROQ12816 1431 aaPredicted RBP33.41■■■□□ 2.94
MAP1LC3A-204ENST00000476428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.36■■■□□ 2.93
MAP1LC3A-204ENST00000476428 VPS8Q8N3P4 1428 aa33.35■■■□□ 2.93
MAP1LC3A-204ENST00000476428 ILDR1Q86SU0 546 aaPredicted RBP33.34■■■□□ 2.93
MAP1LC3A-204ENST00000476428 COL17A1Q9UMD9 1497 aaPredicted RBP33.31■■■□□ 2.92
MAP1LC3A-204ENST00000476428 TTC37Q6PGP7 1564 aa33.26■■■□□ 2.92
MAP1LC3A-204ENST00000476428 KIF14Q15058 1648 aa33.24■■■□□ 2.91
MAP1LC3A-204ENST00000476428 PHLDB1Q86UU1 1377 aa33.22■■■□□ 2.91
MAP1LC3A-204ENST00000476428 PLCH2O75038 1416 aa33.22■■■□□ 2.91
MAP1LC3A-204ENST00000476428 NEO1Q92859 1461 aa33.2■■■□□ 2.91
MAP1LC3A-204ENST00000476428 MTUS2Q5JR59 1369 aa33.2■■■□□ 2.9
MAP1LC3A-204ENST00000476428 ARAP3Q8WWN8 1544 aa33.16■■■□□ 2.9
MAP1LC3A-204ENST00000476428 FANCAO15360 1455 aa33.15■■■□□ 2.9
MAP1LC3A-204ENST00000476428 AKNAQ7Z591 1439 aa33.13■■■□□ 2.89
MAP1LC3A-204ENST00000476428 EFCAB2Q5VUJ9 269 aa33.13■■■□□ 2.89
MAP1LC3A-204ENST00000476428 ADGRL1O94910 1474 aa33.11■■■□□ 2.89
MAP1LC3A-204ENST00000476428 RAPGEF3O95398 923 aa33.09■■■□□ 2.89
MAP1LC3A-204ENST00000476428 TIAM1Q13009 1591 aa33.07■■■□□ 2.88
MAP1LC3A-204ENST00000476428 EHBP1L1Q8N3D4 1523 aa33.05■■■□□ 2.88
MAP1LC3A-204ENST00000476428 MYO5CQ9NQX4 1742 aa33.03■■■□□ 2.88
MAP1LC3A-204ENST00000476428 MAP3K1Q13233 1512 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms