RNA–Protein interactions for RNA: ENST00000476268.6

RPL13A-206, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-206ENST00000476268 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
RPL13A-206ENST00000476268 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
RPL13A-206ENST00000476268 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
RPL13A-206ENST00000476268 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
RPL13A-206ENST00000476268 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
RPL13A-206ENST00000476268 APLP2Q06481 763 aa28.03■■■□□ 2.08
RPL13A-206ENST00000476268 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
RPL13A-206ENST00000476268 SAMD9Q5K651 1589 aa27.95■■■□□ 2.07
RPL13A-206ENST00000476268 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
RPL13A-206ENST00000476268 IQGAP2Q13576 1575 aa27.95■■■□□ 2.06
RPL13A-206ENST00000476268 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
RPL13A-206ENST00000476268 FHOD3Q2V2M9 1422 aa27.9■■■□□ 2.06
RPL13A-206ENST00000476268 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
RPL13A-206ENST00000476268 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
RPL13A-206ENST00000476268 KIAA0586Q9BVV6 1533 aa27.86■■■□□ 2.05
RPL13A-206ENST00000476268 FMN1Q68DA7 1419 aa27.82■■■□□ 2.04
RPL13A-206ENST00000476268 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
RPL13A-206ENST00000476268 UGGT2Q9NYU1 1516 aa27.81■■■□□ 2.04
RPL13A-206ENST00000476268 PCF11O94913 1555 aaKnown RBP27.81■■■□□ 2.04
RPL13A-206ENST00000476268 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
RPL13A-206ENST00000476268 FYCO1Q9BQS8 1478 aa27.77■■■□□ 2.04
RPL13A-206ENST00000476268 CASKIN1Q8WXD9 1431 aa27.77■■■□□ 2.04
RPL13A-206ENST00000476268 FBLN2P98095 1184 aa27.77■■■□□ 2.04
RPL13A-206ENST00000476268 NUP160Q12769 1436 aa27.75■■■□□ 2.03
RPL13A-206ENST00000476268 TIAM1Q13009 1591 aa27.75■■■□□ 2.03
RPL13A-206ENST00000476268 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
RPL13A-206ENST00000476268 CFAP43Q8NDM7 1665 aa27.71■■■□□ 2.03
RPL13A-206ENST00000476268 KIAA0556O60303 1618 aa27.65■■■□□ 2.02
RPL13A-206ENST00000476268 DISP1Q96F81 1524 aa27.64■■■□□ 2.02
RPL13A-206ENST00000476268 CHD1O14646 1710 aa27.64■■■□□ 2.02
RPL13A-206ENST00000476268 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
RPL13A-206ENST00000476268 LRRC9Q6ZRR7 1453 aa27.61■■■□□ 2.01
RPL13A-206ENST00000476268 HRCP23327 699 aa27.55■■■□□ 2
RPL13A-206ENST00000476268 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
RPL13A-206ENST00000476268 JPH4Q96JJ6 628 aa27.54■■■□□ 2
RPL13A-206ENST00000476268 HECW1Q76N89 1606 aa27.53■■■□□ 2
RPL13A-206ENST00000476268 CARMIL2Q6F5E8 1435 aa27.52■■■□□ 2
RPL13A-206ENST00000476268 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
RPL13A-206ENST00000476268 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
RPL13A-206ENST00000476268 RAPGEF6Q8TEU7 1601 aa27.41■■□□□ 1.98
RPL13A-206ENST00000476268 EPRSP07814 1512 aaKnown RBP27.39■■□□□ 1.98
RPL13A-206ENST00000476268 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.97
RPL13A-206ENST00000476268 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
RPL13A-206ENST00000476268 CCNB3Q8WWL7 1395 aa27.36■■□□□ 1.97
RPL13A-206ENST00000476268 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
RPL13A-206ENST00000476268 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
RPL13A-206ENST00000476268 PHLDB1Q86UU1 1377 aa27.34■■□□□ 1.97
RPL13A-206ENST00000476268 HNRNPUL2Q1KMD3 747 aaKnown RBP27.33■■□□□ 1.97
RPL13A-206ENST00000476268 NUP153P49790 1475 aaKnown RBP27.31■■□□□ 1.96
RPL13A-206ENST00000476268 SUPT6HQ7KZ85 1726 aaKnown RBP27.31■■□□□ 1.96
RPL13A-206ENST00000476268 CDK13Q14004 1512 aaKnown RBP27.31■■□□□ 1.96
RPL13A-206ENST00000476268 CLASP1Q7Z460 1538 aa27.3■■□□□ 1.96
RPL13A-206ENST00000476268 MAGI3Q5TCQ9 1506 aa27.28■■□□□ 1.96
RPL13A-206ENST00000476268 PLB1Q6P1J6 1458 aa27.27■■□□□ 1.96
RPL13A-206ENST00000476268 ABCA8O94911 1581 aa27.25■■□□□ 1.95
RPL13A-206ENST00000476268 NCOA2Q15596 1464 aa27.24■■□□□ 1.95
RPL13A-206ENST00000476268 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
RPL13A-206ENST00000476268 PTPRGP23470 1445 aa27.21■■□□□ 1.95
RPL13A-206ENST00000476268 ARHGEF11O15085 1522 aa27.2■■□□□ 1.95
RPL13A-206ENST00000476268 ARID3CA6NKF2 412 aa27.19■■□□□ 1.94
RPL13A-206ENST00000476268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.19■■□□□ 1.94
RPL13A-206ENST00000476268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.17■■□□□ 1.94
RPL13A-206ENST00000476268 CDK11AQ9UQ88 783 aaPredicted RBP27.17■■□□□ 1.94
RPL13A-206ENST00000476268 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
RPL13A-206ENST00000476268 CCER1Q8TC90 406 aaPredicted RBP27.16■■□□□ 1.94
RPL13A-206ENST00000476268 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
RPL13A-206ENST00000476268 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
RPL13A-206ENST00000476268 FAM50AQ14320 339 aaKnown RBP27.12■■□□□ 1.93
RPL13A-206ENST00000476268 TROQ12816 1431 aaPredicted RBP27.08■■□□□ 1.93
RPL13A-206ENST00000476268 UACAQ9BZF9 1416 aa27.06■■□□□ 1.92
RPL13A-206ENST00000476268 ITGAEP38570 1179 aa27.06■■□□□ 1.92
RPL13A-206ENST00000476268 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
RPL13A-206ENST00000476268 ATP10BO94823 1461 aa27.06■■□□□ 1.92
RPL13A-206ENST00000476268 PTPN23Q9H3S7 1636 aa27.03■■□□□ 1.92
RPL13A-206ENST00000476268 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
RPL13A-206ENST00000476268 MIA2Q96PC5 1412 aa27.01■■□□□ 1.91
RPL13A-206ENST00000476268 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
RPL13A-206ENST00000476268 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
RPL13A-206ENST00000476268 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
RPL13A-206ENST00000476268 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
RPL13A-206ENST00000476268 KIF14Q15058 1648 aa26.93■■□□□ 1.9
RPL13A-206ENST00000476268 UHRF1BP1LA0JNW5 1464 aa26.92■■□□□ 1.9
RPL13A-206ENST00000476268 ITSN2Q9NZM3 1697 aa26.92■■□□□ 1.9
RPL13A-206ENST00000476268 SETD5Q9C0A6 1442 aa26.89■■□□□ 1.9
RPL13A-206ENST00000476268 RAB3GAP2Q9H2M9 1393 aa26.85■■□□□ 1.89
RPL13A-206ENST00000476268 GPATCH8Q9UKJ3 1502 aaKnown RBP26.84■■□□□ 1.89
RPL13A-206ENST00000476268 PTPRKQ15262 1439 aa26.83■■□□□ 1.89
RPL13A-206ENST00000476268 ABCC10Q5T3U5 1492 aa26.82■■□□□ 1.88
RPL13A-206ENST00000476268 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
RPL13A-206ENST00000476268 KDM5BQ9UGL1 1544 aa26.8■■□□□ 1.88
RPL13A-206ENST00000476268 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
RPL13A-206ENST00000476268 CDC42BPAQ5VT25 1732 aa26.8■■□□□ 1.88
RPL13A-206ENST00000476268 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
RPL13A-206ENST00000476268 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
RPL13A-206ENST00000476268 HFM1A2PYH4 1435 aa26.75■■□□□ 1.87
RPL13A-206ENST00000476268 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
RPL13A-206ENST00000476268 CAMSAP2Q08AD1 1489 aa26.74■■□□□ 1.87
RPL13A-206ENST00000476268 DAPK1P53355 1430 aa26.71■■□□□ 1.87
RPL13A-206ENST00000476268 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
RPL13A-206ENST00000476268 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms