RNA–Protein interactions for RNA: ENST00000476050.5

TRAF3IP3-211, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 2

Gene TRAF3IP3, Length 3,302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-211ENST00000476050 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
TRAF3IP3-211ENST00000476050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
TRAF3IP3-211ENST00000476050 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
TRAF3IP3-211ENST00000476050 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
TRAF3IP3-211ENST00000476050 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP3-211ENST00000476050 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
TRAF3IP3-211ENST00000476050 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
TRAF3IP3-211ENST00000476050 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
TRAF3IP3-211ENST00000476050 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP3-211ENST00000476050 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
TRAF3IP3-211ENST00000476050 GRIN2BQ13224 1484 aa14.04□□□□□ -0.16
TRAF3IP3-211ENST00000476050 FBLN2P98095 1184 aa14.03□□□□□ -0.16
TRAF3IP3-211ENST00000476050 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
TRAF3IP3-211ENST00000476050 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
TRAF3IP3-211ENST00000476050 PCF11O94913 1555 aaKnown RBP13.99□□□□□ -0.17
TRAF3IP3-211ENST00000476050 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
TRAF3IP3-211ENST00000476050 ITGAEP38570 1179 aa13.97□□□□□ -0.17
TRAF3IP3-211ENST00000476050 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-211ENST00000476050 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.17
TRAF3IP3-211ENST00000476050 SAMD9Q5K651 1589 aa13.96□□□□□ -0.17
TRAF3IP3-211ENST00000476050 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
TRAF3IP3-211ENST00000476050 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
TRAF3IP3-211ENST00000476050 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
TRAF3IP3-211ENST00000476050 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
TRAF3IP3-211ENST00000476050 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
TRAF3IP3-211ENST00000476050 GRIN2AQ12879 1464 aa13.9□□□□□ -0.18
TRAF3IP3-211ENST00000476050 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
TRAF3IP3-211ENST00000476050 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.18
TRAF3IP3-211ENST00000476050 CFAP43Q8NDM7 1665 aa13.9□□□□□ -0.18
TRAF3IP3-211ENST00000476050 FYCO1Q9BQS8 1478 aa13.89□□□□□ -0.19
TRAF3IP3-211ENST00000476050 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
TRAF3IP3-211ENST00000476050 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
TRAF3IP3-211ENST00000476050 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-211ENST00000476050 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
TRAF3IP3-211ENST00000476050 PHLDB1Q86UU1 1377 aa13.86□□□□□ -0.19
TRAF3IP3-211ENST00000476050 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
TRAF3IP3-211ENST00000476050 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
TRAF3IP3-211ENST00000476050 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP3-211ENST00000476050 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
TRAF3IP3-211ENST00000476050 KIAA0586Q9BVV6 1533 aa13.83□□□□□ -0.19
TRAF3IP3-211ENST00000476050 UGGT2Q9NYU1 1516 aa13.81□□□□□ -0.2
TRAF3IP3-211ENST00000476050 DISP1Q96F81 1524 aa13.81□□□□□ -0.2
TRAF3IP3-211ENST00000476050 KIAA0556O60303 1618 aa13.8□□□□□ -0.2
TRAF3IP3-211ENST00000476050 CHD1O14646 1710 aa13.79□□□□□ -0.2
TRAF3IP3-211ENST00000476050 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
TRAF3IP3-211ENST00000476050 NUP160Q12769 1436 aa13.76□□□□□ -0.21
TRAF3IP3-211ENST00000476050 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP3-211ENST00000476050 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
TRAF3IP3-211ENST00000476050 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
TRAF3IP3-211ENST00000476050 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP3-211ENST00000476050 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
TRAF3IP3-211ENST00000476050 CCDC18Q5T9S5 1454 aa13.7□□□□□ -0.22
TRAF3IP3-211ENST00000476050 CARMIL2Q6F5E8 1435 aa13.69□□□□□ -0.22
TRAF3IP3-211ENST00000476050 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
TRAF3IP3-211ENST00000476050 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
TRAF3IP3-211ENST00000476050 RAB3GAP2Q9H2M9 1393 aa13.68□□□□□ -0.22
TRAF3IP3-211ENST00000476050 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
TRAF3IP3-211ENST00000476050 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
TRAF3IP3-211ENST00000476050 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-211ENST00000476050 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-211ENST00000476050 SUPT6HQ7KZ85 1726 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP3-211ENST00000476050 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
TRAF3IP3-211ENST00000476050 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
TRAF3IP3-211ENST00000476050 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
TRAF3IP3-211ENST00000476050 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
TRAF3IP3-211ENST00000476050 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP3-211ENST00000476050 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
TRAF3IP3-211ENST00000476050 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
TRAF3IP3-211ENST00000476050 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
TRAF3IP3-211ENST00000476050 PTPRGP23470 1445 aa13.59□□□□□ -0.23
TRAF3IP3-211ENST00000476050 SHROOM2Q13796 1616 aa13.58□□□□□ -0.23
TRAF3IP3-211ENST00000476050 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
TRAF3IP3-211ENST00000476050 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
TRAF3IP3-211ENST00000476050 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-211ENST00000476050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAF3IP3-211ENST00000476050 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-211ENST00000476050 ABCA8O94911 1581 aa13.57□□□□□ -0.24
TRAF3IP3-211ENST00000476050 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
TRAF3IP3-211ENST00000476050 KIF14Q15058 1648 aa13.55□□□□□ -0.24
TRAF3IP3-211ENST00000476050 NEUROD1Q13562 356 aa13.54□□□□□ -0.24
TRAF3IP3-211ENST00000476050 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
TRAF3IP3-211ENST00000476050 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
TRAF3IP3-211ENST00000476050 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.24
TRAF3IP3-211ENST00000476050 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.24
TRAF3IP3-211ENST00000476050 ATP10BO94823 1461 aa13.52□□□□□ -0.25
TRAF3IP3-211ENST00000476050 CLSPNQ9HAW4 1339 aa13.52□□□□□ -0.25
TRAF3IP3-211ENST00000476050 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
TRAF3IP3-211ENST00000476050 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
TRAF3IP3-211ENST00000476050 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
TRAF3IP3-211ENST00000476050 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
TRAF3IP3-211ENST00000476050 NAIPQ13075 1403 aa13.48□□□□□ -0.25
TRAF3IP3-211ENST00000476050 HFM1A2PYH4 1435 aa13.48□□□□□ -0.25
TRAF3IP3-211ENST00000476050 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
TRAF3IP3-211ENST00000476050 DIEXFQ68CQ4 756 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP3-211ENST00000476050 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
TRAF3IP3-211ENST00000476050 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
TRAF3IP3-211ENST00000476050 KCNH8Q96L42 1107 aa13.46□□□□□ -0.26
TRAF3IP3-211ENST00000476050 GPATCH8Q9UKJ3 1502 aaKnown RBP13.45□□□□□ -0.26
TRAF3IP3-211ENST00000476050 CDC42BPAQ5VT25 1732 aa13.44□□□□□ -0.26
TRAF3IP3-211ENST00000476050 DAPK1P53355 1430 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms