RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 NPM1P06748 294 aaKnown RBP eCLIP26.74■■□□□ 1.87
CSNK2B-207ENST00000475875 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
CSNK2B-207ENST00000475875 KDM6BO15054 1643 aa26.71■■□□□ 1.87
CSNK2B-207ENST00000475875 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
CSNK2B-207ENST00000475875 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
CSNK2B-207ENST00000475875 ADCY10Q96PN6 1610 aa26.56■■□□□ 1.84
CSNK2B-207ENST00000475875 RUSC2Q8N2Y8 1516 aa26.53■■□□□ 1.84
CSNK2B-207ENST00000475875 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
CSNK2B-207ENST00000475875 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
CSNK2B-207ENST00000475875 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
CSNK2B-207ENST00000475875 ADGRL1O94910 1474 aa26.42■■□□□ 1.82
CSNK2B-207ENST00000475875 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
CSNK2B-207ENST00000475875 HECW2Q9P2P5 1572 aa26.32■■□□□ 1.8
CSNK2B-207ENST00000475875 GLI2P10070 1586 aa26.3■■□□□ 1.8
CSNK2B-207ENST00000475875 PLB1Q6P1J6 1458 aa26.28■■□□□ 1.8
CSNK2B-207ENST00000475875 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
CSNK2B-207ENST00000475875 PTPRGP23470 1445 aa26.26■■□□□ 1.79
CSNK2B-207ENST00000475875 PPRC1Q5VV67 1664 aaKnown RBP26.25■■□□□ 1.79
CSNK2B-207ENST00000475875 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
CSNK2B-207ENST00000475875 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
CSNK2B-207ENST00000475875 TNIKQ9UKE5 1360 aa26.16■■□□□ 1.78
CSNK2B-207ENST00000475875 UHRF1BP1LA0JNW5 1464 aa26.14■■□□□ 1.78
CSNK2B-207ENST00000475875 TEX14Q8IWB6 1497 aa26.14■■□□□ 1.78
CSNK2B-207ENST00000475875 CARMIL2Q6F5E8 1435 aa26.14■■□□□ 1.77
CSNK2B-207ENST00000475875 FBXO41Q8TF61 875 aa26.13■■□□□ 1.77
CSNK2B-207ENST00000475875 IGF1RP08069 1367 aa26.11■■□□□ 1.77
CSNK2B-207ENST00000475875 CUL7Q14999 1698 aa26.1■■□□□ 1.77
CSNK2B-207ENST00000475875 EPRSP07814 1512 aaKnown RBP26.07■■□□□ 1.76
CSNK2B-207ENST00000475875 MAP3K4Q9Y6R4 1608 aa26.06■■□□□ 1.76
CSNK2B-207ENST00000475875 UACAQ9BZF9 1416 aa26.04■■□□□ 1.76
CSNK2B-207ENST00000475875 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
CSNK2B-207ENST00000475875 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
CSNK2B-207ENST00000475875 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
CSNK2B-207ENST00000475875 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
CSNK2B-207ENST00000475875 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
CSNK2B-207ENST00000475875 CARMIL1Q5VZK9 1371 aa25.92■■□□□ 1.74
CSNK2B-207ENST00000475875 DISP1Q96F81 1524 aa25.88■■□□□ 1.73
CSNK2B-207ENST00000475875 ZCCHC11Q5TAX3 1644 aaKnown RBP25.85■■□□□ 1.73
CSNK2B-207ENST00000475875 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
CSNK2B-207ENST00000475875 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
CSNK2B-207ENST00000475875 CD109Q6YHK3 1445 aa25.78■■□□□ 1.72
CSNK2B-207ENST00000475875 UGGT2Q9NYU1 1516 aa25.78■■□□□ 1.72
CSNK2B-207ENST00000475875 CFAP43Q8NDM7 1665 aa25.74■■□□□ 1.71
CSNK2B-207ENST00000475875 KIF21BO75037 1637 aa25.7■■□□□ 1.71
CSNK2B-207ENST00000475875 KIAA0556O60303 1618 aa25.69■■□□□ 1.7
CSNK2B-207ENST00000475875 PTPRMP28827 1452 aa25.68■■□□□ 1.7
CSNK2B-207ENST00000475875 ARAP3Q8WWN8 1544 aa25.67■■□□□ 1.7
CSNK2B-207ENST00000475875 LMTK3Q96Q04 1460 aa25.66■■□□□ 1.7
CSNK2B-207ENST00000475875 ADAMTSL3P82987 1691 aa25.63■■□□□ 1.69
CSNK2B-207ENST00000475875 PCF11O94913 1555 aaKnown RBP25.6■■□□□ 1.69
CSNK2B-207ENST00000475875 KCNH8Q96L42 1107 aa25.59■■□□□ 1.69
CSNK2B-207ENST00000475875 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
CSNK2B-207ENST00000475875 RAPGEF2Q9Y4G8 1499 aa25.58■■□□□ 1.69
CSNK2B-207ENST00000475875 ABCA8O94911 1581 aa25.54■■□□□ 1.68
CSNK2B-207ENST00000475875 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
CSNK2B-207ENST00000475875 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
CSNK2B-207ENST00000475875 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
CSNK2B-207ENST00000475875 SOCS7O14512 581 aa25.42■■□□□ 1.66
CSNK2B-207ENST00000475875 NEO1Q92859 1461 aa25.4■■□□□ 1.66
CSNK2B-207ENST00000475875 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
CSNK2B-207ENST00000475875 ABCA9Q8IUA7 1624 aa25.38■■□□□ 1.65
CSNK2B-207ENST00000475875 RAPGEF3O95398 923 aa25.38■■□□□ 1.65
CSNK2B-207ENST00000475875 ARID4BQ4LE39 1312 aaPredicted RBP25.37■■□□□ 1.65
CSNK2B-207ENST00000475875 CTTNBP2Q8WZ74 1663 aa25.34■■□□□ 1.65
CSNK2B-207ENST00000475875 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
CSNK2B-207ENST00000475875 DISP3Q9P2K9 1392 aa25.31■■□□□ 1.64
CSNK2B-207ENST00000475875 ILDR2Q71H61 639 aa25.31■■□□□ 1.64
CSNK2B-207ENST00000475875 ATP10BO94823 1461 aa25.31■■□□□ 1.64
CSNK2B-207ENST00000475875 FRMPD1Q5SYB0 1578 aa25.31■■□□□ 1.64
CSNK2B-207ENST00000475875 HSPA2P54652 639 aa25.3■■□□□ 1.64
CSNK2B-207ENST00000475875 RIMS1Q86UR5 1692 aaKnown RBP25.28■■□□□ 1.64
CSNK2B-207ENST00000475875 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
CSNK2B-207ENST00000475875 POGZQ7Z3K3 1410 aa25.25■■□□□ 1.63
CSNK2B-207ENST00000475875 FANCAO15360 1455 aa25.2■■□□□ 1.62
CSNK2B-207ENST00000475875 DENND4BO75064 1496 aaPredicted RBP25.19■■□□□ 1.62
CSNK2B-207ENST00000475875 ARID3CA6NKF2 412 aa25.18■■□□□ 1.62
CSNK2B-207ENST00000475875 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
CSNK2B-207ENST00000475875 AKNAQ7Z591 1439 aa25.17■■□□□ 1.62
CSNK2B-207ENST00000475875 RICTORQ6R327 1708 aa25.12■■□□□ 1.61
CSNK2B-207ENST00000475875 PRXQ9BXM0 1461 aa25.11■■□□□ 1.61
CSNK2B-207ENST00000475875 DMRT2Q9Y5R5 561 aa25.11■■□□□ 1.61
CSNK2B-207ENST00000475875 ZMYM4Q5VZL5 1548 aa25.11■■□□□ 1.61
CSNK2B-207ENST00000475875 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
CSNK2B-207ENST00000475875 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
CSNK2B-207ENST00000475875 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
CSNK2B-207ENST00000475875 SPATA31D1Q6ZQQ2 1576 aa25.09■■□□□ 1.61
CSNK2B-207ENST00000475875 EFCAB5A4FU69 1503 aa25.08■■□□□ 1.61
CSNK2B-207ENST00000475875 CFAP74Q9C0B2 1584 aa25.07■■□□□ 1.6
CSNK2B-207ENST00000475875 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
CSNK2B-207ENST00000475875 RAPGEF6Q8TEU7 1601 aa25.06■■□□□ 1.6
CSNK2B-207ENST00000475875 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
CSNK2B-207ENST00000475875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
CSNK2B-207ENST00000475875 HNRNPUL2Q1KMD3 747 aaKnown RBP25.04■■□□□ 1.6
CSNK2B-207ENST00000475875 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
CSNK2B-207ENST00000475875 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
CSNK2B-207ENST00000475875 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
CSNK2B-207ENST00000475875 NUP153P49790 1475 aaKnown RBP24.99■■□□□ 1.59
CSNK2B-207ENST00000475875 SAMD9Q5K651 1589 aa24.99■■□□□ 1.59
CSNK2B-207ENST00000475875 SIGLEC1Q9BZZ2 1709 aa24.99■■□□□ 1.59
CSNK2B-207ENST00000475875 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms