RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-223ENST00000475732 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
DMD-223ENST00000475732 EEA1Q15075 1411 aa16.7■□□□□ 0.26
DMD-223ENST00000475732 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
DMD-223ENST00000475732 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
DMD-223ENST00000475732 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
DMD-223ENST00000475732 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
DMD-223ENST00000475732 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
DMD-223ENST00000475732 NUP160Q12769 1436 aa16.62■□□□□ 0.25
DMD-223ENST00000475732 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
DMD-223ENST00000475732 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
DMD-223ENST00000475732 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
DMD-223ENST00000475732 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
DMD-223ENST00000475732 KIF21BO75037 1637 aa16.52■□□□□ 0.24
DMD-223ENST00000475732 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.24
DMD-223ENST00000475732 CTTNBP2Q8WZ74 1663 aa16.5■□□□□ 0.23
DMD-223ENST00000475732 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
DMD-223ENST00000475732 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
DMD-223ENST00000475732 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
DMD-223ENST00000475732 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
DMD-223ENST00000475732 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
DMD-223ENST00000475732 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
DMD-223ENST00000475732 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
DMD-223ENST00000475732 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
DMD-223ENST00000475732 PRG4Q92954 1404 aaPredicted RBP16.41■□□□□ 0.22
DMD-223ENST00000475732 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
DMD-223ENST00000475732 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
DMD-223ENST00000475732 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
DMD-223ENST00000475732 UGGT2Q9NYU1 1516 aa16.37■□□□□ 0.21
DMD-223ENST00000475732 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
DMD-223ENST00000475732 ARAP1Q96P48 1450 aa16.34■□□□□ 0.21
DMD-223ENST00000475732 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
DMD-223ENST00000475732 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
DMD-223ENST00000475732 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
DMD-223ENST00000475732 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
DMD-223ENST00000475732 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
DMD-223ENST00000475732 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
DMD-223ENST00000475732 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
DMD-223ENST00000475732 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
DMD-223ENST00000475732 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
DMD-223ENST00000475732 PTPRGP23470 1445 aa16.24■□□□□ 0.19
DMD-223ENST00000475732 EFCAB5A4FU69 1503 aa16.23■□□□□ 0.19
DMD-223ENST00000475732 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
DMD-223ENST00000475732 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
DMD-223ENST00000475732 P3H3Q8IVL6 736 aa16.21■□□□□ 0.19
DMD-223ENST00000475732 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
DMD-223ENST00000475732 ARHGAP35Q9NRY4 1499 aa16.16■□□□□ 0.18
DMD-223ENST00000475732 CLIP1P30622 1438 aa16.14■□□□□ 0.17
DMD-223ENST00000475732 ADCY10Q96PN6 1610 aa16.14■□□□□ 0.17
DMD-223ENST00000475732 UACAQ9BZF9 1416 aa16.13■□□□□ 0.17
DMD-223ENST00000475732 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
DMD-223ENST00000475732 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
DMD-223ENST00000475732 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
DMD-223ENST00000475732 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
DMD-223ENST00000475732 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
DMD-223ENST00000475732 ABCA8O94911 1581 aa16.1■□□□□ 0.17
DMD-223ENST00000475732 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
DMD-223ENST00000475732 FMN1Q68DA7 1419 aa16.08■□□□□ 0.16
DMD-223ENST00000475732 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
DMD-223ENST00000475732 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
DMD-223ENST00000475732 KDM5BQ9UGL1 1544 aa16.03■□□□□ 0.16
DMD-223ENST00000475732 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
DMD-223ENST00000475732 MAPKBP1O60336 1514 aa16■□□□□ 0.15
DMD-223ENST00000475732 NUP153P49790 1475 aaKnown RBP15.99■□□□□ 0.15
DMD-223ENST00000475732 HECW1Q76N89 1606 aa15.99■□□□□ 0.15
DMD-223ENST00000475732 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
DMD-223ENST00000475732 ATP10BO94823 1461 aa15.97■□□□□ 0.15
DMD-223ENST00000475732 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.15
DMD-223ENST00000475732 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
DMD-223ENST00000475732 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
DMD-223ENST00000475732 ASXL2Q76L83 1435 aa15.94■□□□□ 0.14
DMD-223ENST00000475732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
DMD-223ENST00000475732 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
DMD-223ENST00000475732 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
DMD-223ENST00000475732 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
DMD-223ENST00000475732 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
DMD-223ENST00000475732 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
DMD-223ENST00000475732 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
DMD-223ENST00000475732 VPS8Q8N3P4 1428 aa15.91■□□□□ 0.14
DMD-223ENST00000475732 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
DMD-223ENST00000475732 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
DMD-223ENST00000475732 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
DMD-223ENST00000475732 KIF13AQ9H1H9 1805 aa15.89■□□□□ 0.13
DMD-223ENST00000475732 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
DMD-223ENST00000475732 DIP2BQ9P265 1576 aa15.88■□□□□ 0.13
DMD-223ENST00000475732 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
DMD-223ENST00000475732 FAM69CQ0P6D2 419 aa15.86■□□□□ 0.13
DMD-223ENST00000475732 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
DMD-223ENST00000475732 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
DMD-223ENST00000475732 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
DMD-223ENST00000475732 GLI2P10070 1586 aa15.83■□□□□ 0.13
DMD-223ENST00000475732 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
DMD-223ENST00000475732 TROQ12816 1431 aaPredicted RBP15.78■□□□□ 0.12
DMD-223ENST00000475732 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
DMD-223ENST00000475732 MAP3K4Q9Y6R4 1608 aa15.78■□□□□ 0.12
DMD-223ENST00000475732 ABCA9Q8IUA7 1624 aa15.77■□□□□ 0.12
DMD-223ENST00000475732 TIAM1Q13009 1591 aa15.77■□□□□ 0.11
DMD-223ENST00000475732 MAGI3Q5TCQ9 1506 aa15.76■□□□□ 0.11
DMD-223ENST00000475732 KIF14Q15058 1648 aa15.76■□□□□ 0.11
DMD-223ENST00000475732 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
DMD-223ENST00000475732 APLP2Q06481 763 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms