RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 NUP160Q12769 1436 aa16.85■□□□□ 0.29
TRAIP-205ENST00000475495 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
TRAIP-205ENST00000475495 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
TRAIP-205ENST00000475495 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
TRAIP-205ENST00000475495 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
TRAIP-205ENST00000475495 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
TRAIP-205ENST00000475495 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
TRAIP-205ENST00000475495 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
TRAIP-205ENST00000475495 ADRA2BP18089 450 aa16.77■□□□□ 0.28
TRAIP-205ENST00000475495 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
TRAIP-205ENST00000475495 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-205ENST00000475495 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
TRAIP-205ENST00000475495 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
TRAIP-205ENST00000475495 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
TRAIP-205ENST00000475495 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
TRAIP-205ENST00000475495 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
TRAIP-205ENST00000475495 KIF21BO75037 1637 aa16.66■□□□□ 0.26
TRAIP-205ENST00000475495 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-205ENST00000475495 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
TRAIP-205ENST00000475495 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
TRAIP-205ENST00000475495 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
TRAIP-205ENST00000475495 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
TRAIP-205ENST00000475495 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
TRAIP-205ENST00000475495 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
TRAIP-205ENST00000475495 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
TRAIP-205ENST00000475495 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
TRAIP-205ENST00000475495 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
TRAIP-205ENST00000475495 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
TRAIP-205ENST00000475495 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
TRAIP-205ENST00000475495 PTPRGP23470 1445 aa16.47■□□□□ 0.23
TRAIP-205ENST00000475495 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
TRAIP-205ENST00000475495 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
TRAIP-205ENST00000475495 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
TRAIP-205ENST00000475495 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
TRAIP-205ENST00000475495 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
TRAIP-205ENST00000475495 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
TRAIP-205ENST00000475495 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
TRAIP-205ENST00000475495 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAIP-205ENST00000475495 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
TRAIP-205ENST00000475495 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
TRAIP-205ENST00000475495 ABCC2Q92887 1545 aa16.33■□□□□ 0.2
TRAIP-205ENST00000475495 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
TRAIP-205ENST00000475495 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
TRAIP-205ENST00000475495 ABCA8O94911 1581 aa16.3■□□□□ 0.2
TRAIP-205ENST00000475495 PLB1Q6P1J6 1458 aa16.3■□□□□ 0.2
TRAIP-205ENST00000475495 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
TRAIP-205ENST00000475495 CLIP1P30622 1438 aa16.27■□□□□ 0.19
TRAIP-205ENST00000475495 KDM5BQ9UGL1 1544 aa16.26■□□□□ 0.19
TRAIP-205ENST00000475495 FMN1Q68DA7 1419 aa16.26■□□□□ 0.19
TRAIP-205ENST00000475495 RAPGEF6Q8TEU7 1601 aa16.26■□□□□ 0.19
TRAIP-205ENST00000475495 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
TRAIP-205ENST00000475495 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-205ENST00000475495 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
TRAIP-205ENST00000475495 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
TRAIP-205ENST00000475495 KIF13AQ9H1H9 1805 aa16.2■□□□□ 0.18
TRAIP-205ENST00000475495 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
TRAIP-205ENST00000475495 ATP10BO94823 1461 aa16.17■□□□□ 0.18
TRAIP-205ENST00000475495 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
TRAIP-205ENST00000475495 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
TRAIP-205ENST00000475495 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
TRAIP-205ENST00000475495 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
TRAIP-205ENST00000475495 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
TRAIP-205ENST00000475495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
TRAIP-205ENST00000475495 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
TRAIP-205ENST00000475495 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
TRAIP-205ENST00000475495 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
TRAIP-205ENST00000475495 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
TRAIP-205ENST00000475495 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
TRAIP-205ENST00000475495 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
TRAIP-205ENST00000475495 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
TRAIP-205ENST00000475495 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
TRAIP-205ENST00000475495 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
TRAIP-205ENST00000475495 GLI2P10070 1586 aa16.09■□□□□ 0.17
TRAIP-205ENST00000475495 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
TRAIP-205ENST00000475495 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
TRAIP-205ENST00000475495 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
TRAIP-205ENST00000475495 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
TRAIP-205ENST00000475495 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
TRAIP-205ENST00000475495 TSPOAP1O95153 1857 aa16.04■□□□□ 0.16
TRAIP-205ENST00000475495 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.16
TRAIP-205ENST00000475495 CFAP43Q8NDM7 1665 aa16.01■□□□□ 0.15
TRAIP-205ENST00000475495 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
TRAIP-205ENST00000475495 ABCA9Q8IUA7 1624 aa15.98■□□□□ 0.15
TRAIP-205ENST00000475495 TROQ12816 1431 aaPredicted RBP15.97■□□□□ 0.15
TRAIP-205ENST00000475495 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
TRAIP-205ENST00000475495 TEX14Q8IWB6 1497 aa15.95■□□□□ 0.14
TRAIP-205ENST00000475495 PPRC1Q5VV67 1664 aaKnown RBP15.95■□□□□ 0.14
TRAIP-205ENST00000475495 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
TRAIP-205ENST00000475495 KIF14Q15058 1648 aa15.93■□□□□ 0.14
TRAIP-205ENST00000475495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRAIP-205ENST00000475495 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
TRAIP-205ENST00000475495 APLP2Q06481 763 aa15.9■□□□□ 0.14
TRAIP-205ENST00000475495 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
TRAIP-205ENST00000475495 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
TRAIP-205ENST00000475495 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
TRAIP-205ENST00000475495 MYO5CQ9NQX4 1742 aa15.87■□□□□ 0.13
TRAIP-205ENST00000475495 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
TRAIP-205ENST00000475495 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
TRAIP-205ENST00000475495 PLCH2O75038 1416 aa15.85■□□□□ 0.13
TRAIP-205ENST00000475495 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms