RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
SSR1-205ENST00000475213 CEP170Q5SW79 1584 aa21.31■■□□□ 1
SSR1-205ENST00000475213 NUP160Q12769 1436 aa21.3■■□□□ 1
SSR1-205ENST00000475213 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
SSR1-205ENST00000475213 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
SSR1-205ENST00000475213 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
SSR1-205ENST00000475213 IGF1RP08069 1367 aa21.19■□□□□ 0.98
SSR1-205ENST00000475213 CUL7Q14999 1698 aa21.15■□□□□ 0.98
SSR1-205ENST00000475213 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
SSR1-205ENST00000475213 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.97
SSR1-205ENST00000475213 JPH4Q96JJ6 628 aa21.08■□□□□ 0.97
SSR1-205ENST00000475213 PRG4Q92954 1404 aaPredicted RBP21.07■□□□□ 0.96
SSR1-205ENST00000475213 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
SSR1-205ENST00000475213 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
SSR1-205ENST00000475213 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.94
SSR1-205ENST00000475213 IQGAP2Q13576 1575 aa20.87■□□□□ 0.93
SSR1-205ENST00000475213 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
SSR1-205ENST00000475213 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
SSR1-205ENST00000475213 PTPRGP23470 1445 aa20.77■□□□□ 0.91
SSR1-205ENST00000475213 KIF13AQ9H1H9 1805 aa20.76■□□□□ 0.91
SSR1-205ENST00000475213 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
SSR1-205ENST00000475213 DISP1Q96F81 1524 aa20.75■□□□□ 0.91
SSR1-205ENST00000475213 NPM1P06748 294 aaKnown RBP eCLIP20.75■□□□□ 0.91
SSR1-205ENST00000475213 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
SSR1-205ENST00000475213 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
SSR1-205ENST00000475213 PRXQ9BXM0 1461 aa20.74■□□□□ 0.91
SSR1-205ENST00000475213 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
SSR1-205ENST00000475213 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
SSR1-205ENST00000475213 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
SSR1-205ENST00000475213 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
SSR1-205ENST00000475213 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
SSR1-205ENST00000475213 FAM69CQ0P6D2 419 aa20.64■□□□□ 0.89
SSR1-205ENST00000475213 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
SSR1-205ENST00000475213 DIP2BQ9P265 1576 aa20.63■□□□□ 0.89
SSR1-205ENST00000475213 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
SSR1-205ENST00000475213 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
SSR1-205ENST00000475213 UACAQ9BZF9 1416 aa20.62■□□□□ 0.89
SSR1-205ENST00000475213 EEA1Q15075 1411 aa20.6■□□□□ 0.89
SSR1-205ENST00000475213 GOLGA3Q08378 1498 aa20.58■□□□□ 0.89
SSR1-205ENST00000475213 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
SSR1-205ENST00000475213 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
SSR1-205ENST00000475213 TSPOAP1O95153 1857 aa20.53■□□□□ 0.88
SSR1-205ENST00000475213 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
SSR1-205ENST00000475213 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
SSR1-205ENST00000475213 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
SSR1-205ENST00000475213 ABCA8O94911 1581 aa20.47■□□□□ 0.87
SSR1-205ENST00000475213 GLI2P10070 1586 aa20.46■□□□□ 0.87
SSR1-205ENST00000475213 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
SSR1-205ENST00000475213 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
SSR1-205ENST00000475213 KIF21BO75037 1637 aa20.43■□□□□ 0.86
SSR1-205ENST00000475213 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
SSR1-205ENST00000475213 PPRC1Q5VV67 1664 aaKnown RBP20.4■□□□□ 0.86
SSR1-205ENST00000475213 KDM6BO15054 1643 aa20.38■□□□□ 0.85
SSR1-205ENST00000475213 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
SSR1-205ENST00000475213 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
SSR1-205ENST00000475213 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
SSR1-205ENST00000475213 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
SSR1-205ENST00000475213 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
SSR1-205ENST00000475213 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
SSR1-205ENST00000475213 ATP10BO94823 1461 aa20.3■□□□□ 0.84
SSR1-205ENST00000475213 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
SSR1-205ENST00000475213 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
SSR1-205ENST00000475213 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.83
SSR1-205ENST00000475213 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
SSR1-205ENST00000475213 TEX14Q8IWB6 1497 aa20.26■□□□□ 0.83
SSR1-205ENST00000475213 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SSR1-205ENST00000475213 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
SSR1-205ENST00000475213 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
SSR1-205ENST00000475213 COL17A1Q9UMD9 1497 aaPredicted RBP20.22■□□□□ 0.83
SSR1-205ENST00000475213 MAGI3Q5TCQ9 1506 aa20.2■□□□□ 0.82
SSR1-205ENST00000475213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
SSR1-205ENST00000475213 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
SSR1-205ENST00000475213 ABCA9Q8IUA7 1624 aa20.15■□□□□ 0.82
SSR1-205ENST00000475213 ARHGAP35Q9NRY4 1499 aa20.14■□□□□ 0.81
SSR1-205ENST00000475213 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
SSR1-205ENST00000475213 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.81
SSR1-205ENST00000475213 FMN1Q68DA7 1419 aa20.08■□□□□ 0.8
SSR1-205ENST00000475213 KDM4FA0A1W2PPD8 638 aa20.06■□□□□ 0.8
SSR1-205ENST00000475213 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
SSR1-205ENST00000475213 ARAP3Q8WWN8 1544 aa20.04■□□□□ 0.8
SSR1-205ENST00000475213 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
SSR1-205ENST00000475213 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
SSR1-205ENST00000475213 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
SSR1-205ENST00000475213 NEO1Q92859 1461 aa20■□□□□ 0.79
SSR1-205ENST00000475213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20■□□□□ 0.79
SSR1-205ENST00000475213 TTC37Q6PGP7 1564 aa19.97■□□□□ 0.79
SSR1-205ENST00000475213 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
SSR1-205ENST00000475213 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
SSR1-205ENST00000475213 ADGRL1O94910 1474 aa19.96■□□□□ 0.79
SSR1-205ENST00000475213 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
SSR1-205ENST00000475213 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
SSR1-205ENST00000475213 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
SSR1-205ENST00000475213 CFAP74Q9C0B2 1584 aa19.91■□□□□ 0.78
SSR1-205ENST00000475213 FANCAO15360 1455 aa19.91■□□□□ 0.78
SSR1-205ENST00000475213 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
SSR1-205ENST00000475213 CLIP1P30622 1438 aa19.9■□□□□ 0.78
SSR1-205ENST00000475213 AKNAQ7Z591 1439 aa19.9■□□□□ 0.78
SSR1-205ENST00000475213 CASKIN1Q8WXD9 1431 aa19.9■□□□□ 0.78
SSR1-205ENST00000475213 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SSR1-205ENST00000475213 TROQ12816 1431 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms